HEADER TEXTURE OF CONNECTIVE TISSUE 23-MAY-78 1KES TITLE CONFORMATION OF KERATAN SULPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-ACETAMIDO-2-DEOXY-6-O-SULFO-BETA-D-GLUCOPYRANOSE-(1-3)-6- COMPND 3 O-SULFO-BETA-D-GALACTOPYRANOSE-(1-4)-2-ACETAMIDO-2-DEOXY-6-O-SULFO- COMPND 4 BETA-D-GLUCOPYRANOSE-(1-3)-6-O-SULFO-BETA-D-GALACTOPYRANOSE; COMPND 5 CHAIN: A; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1 KEYWDS TEXTURE OF CONNECTIVE TISSUE EXPDTA FIBER DIFFRACTION AUTHOR S.ARNOTT REVDAT 8 07-FEB-24 1KES 1 HETSYN REVDAT 7 29-JUL-20 1KES 1 COMPND REMARK DBREF HETNAM REVDAT 7 2 1 LINK ATOM REVDAT 6 25-AUG-09 1KES 1 SOURCE REVDAT 5 24-FEB-09 1KES 1 VERSN REVDAT 4 01-APR-03 1KES 1 JRNL REVDAT 3 15-OCT-94 1KES 3 EXPDTA CRYST1 SCALE REVDAT 2 30-SEP-83 1KES 1 REVDAT REVDAT 1 28-MAR-80 1KES 0 JRNL AUTH S.ARNOTT,J.M.GUS,D.W.HUKINS,I.C.DEA,D.A.REES JRNL TITL CONFORMATION OF KERATAN SULPHATE. JRNL REF J.MOL.BIOL. V. 88 175 1974 JRNL REFN ISSN 0022-2836 JRNL PMID 4280446 JRNL DOI 10.1016/0022-2836(74)90303-9 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.ARNOTT,W.E.SCOTT REMARK 1 TITL ACCURATE X-RAY DIFFRACTION ANALYSIS OF FIBROUS REMARK 1 TITL 2 POLYSACCHARIDES CONTAINING PYRANOSE RINGS. PART 1 THE REMARK 1 TITL 3 LINKED-ATOM APPROACH. REMARK 1 REF J.CHEM.SOC.,PERKIN TRANS.2 324 1972 REMARK 1 REFN ISSN 0300-9580 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : LINKED-ATOM LEAST-SQUARES MODEL-BUILDING PROCEDURE REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KES COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000174420. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : FIBER DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 205 REMARK 205 FIBER DIFFRACTION REMARK 205 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM FIBER REMARK 205 DIFFRACTION DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 205 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE REMARK 205 VALUES ON THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE FOUR-RESIDUE CHAIN SEGMENT GIVEN HERE WAS GENERATED REMARK 300 FROM THE PUBLISHED TWO-RESIDUE SEGMENT BY APPLICATION OF REMARK 300 THE TWO-FOLD SCREW AXIS PARALLEL TO Z AND PASSING THROUGH REMARK 300 X=0,Y=0. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: UNKNOWN REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NGS A 4 HET G6S A 1 16 HET NGS A 2 18 HET G6S A 3 15 HET NGS A 4 17 HETNAM G6S 6-O-SULFO-BETA-D-GALACTOPYRANOSE HETNAM NGS 2-ACETAMIDO-2-DEOXY-6-O-SULFO-BETA-D-GLUCOPYRANOSE HETSYN G6S D-GALACTOSE-6-SULFATE; 6-O-SULFO-BETA-D-GALACTOSE; 6-O- HETSYN 2 G6S SULFO-D-GALACTOSE; 6-O-SULFO-GALACTOSE HETSYN NGS 2-(ACETYLAMINO)-2-DEOXY-6-O-SULFO-BETA-D-GLUCOPYRANOSE; HETSYN 2 NGS N-ACETYL-D-GLUCOSAMINE-6-SULFATE; N-ACETYL-6-O-SULFO- HETSYN 3 NGS BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-6-O-SULFO- HETSYN 4 NGS BETA-D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-6-O-SULFO-D- HETSYN 5 NGS GLUCOSE; 2-ACETAMIDO-2-DEOXY-6-O-SULFO-GLUCOSE FORMUL 1 G6S 2(C6 H12 O9 S) FORMUL 1 NGS 2(C8 H15 N O9 S) LINK O3 G6S A 1 C1 NGS A 2 1555 1555 1.39 LINK O4 NGS A 2 C1 G6S A 3 1555 1555 1.39 LINK O3 G6S A 3 C1 NGS A 4 1555 1555 1.39 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 0.100000 0.000000 0.000000 0.00000 ORIGX2 0.000000 0.100000 0.000000 0.00000 ORIGX3 0.000000 0.000000 0.100000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 HETATM 1 C1 G6S A 1 1.195 0.434 2.038 1.00 0.00 C HETATM 2 C2 G6S A 1 1.152 -0.273 3.386 1.00 0.00 C HETATM 3 C3 G6S A 1 1.658 0.647 4.487 1.00 0.00 C HETATM 4 C4 G6S A 1 3.032 1.196 4.125 1.00 0.00 C HETATM 5 C5 G6S A 1 2.999 1.820 2.734 1.00 0.00 C HETATM 6 C6 G6S A 1 4.363 2.283 2.268 1.00 0.00 C HETATM 7 O1 G6S A 1 0.850 -0.481 1.052 1.00 0.00 O HETATM 8 O2 G6S A 1 -0.181 -0.694 3.653 1.00 0.00 O HETATM 9 O4 G6S A 1 4.004 0.149 4.131 1.00 0.00 O HETATM 10 O5 G6S A 1 2.532 0.862 1.772 1.00 0.00 O HETATM 11 O6 G6S A 1 4.305 2.887 0.977 1.00 0.00 O HETATM 12 S G6S A 1 5.696 3.414 0.386 1.00 0.00 S HETATM 13 O7 G6S A 1 6.623 2.305 0.270 1.00 0.00 O HETATM 14 O8 G6S A 1 6.251 4.416 1.275 1.00 0.00 O HETATM 15 O9 G6S A 1 5.476 3.998 -0.923 1.00 0.00 O HETATM 16 O3 G6S A 1 1.737 -0.075 5.717 1.00 0.00 O HETATM 17 C1 NGS A 2 0.862 0.315 6.723 1.00 0.00 C HETATM 18 C2 NGS A 2 0.013 -0.888 7.115 1.00 0.00 C HETATM 19 C3 NGS A 2 -0.864 -0.553 8.312 1.00 0.00 C HETATM 20 C4 NGS A 2 -0.016 0.000 9.450 1.00 0.00 C HETATM 21 C5 NGS A 2 0.849 1.151 8.950 1.00 0.00 C HETATM 22 C6 NGS A 2 1.799 1.670 10.008 1.00 0.00 C HETATM 23 O3 NGS A 2 -1.548 -1.729 8.748 1.00 0.00 O HETATM 24 O5 NGS A 2 1.654 0.720 7.841 1.00 0.00 O HETATM 25 O6 NGS A 2 2.581 2.764 9.528 1.00 0.00 O HETATM 26 N2 NGS A 2 -0.812 -1.302 5.959 1.00 0.00 N HETATM 27 C7 NGS A 2 -0.629 -2.562 5.426 1.00 0.00 C HETATM 28 O7 NGS A 2 0.183 -3.364 5.858 1.00 0.00 O HETATM 29 C8 NGS A 2 -1.535 -2.850 4.253 1.00 0.00 C HETATM 30 S NGS A 2 4.038 2.920 10.170 1.00 0.00 S HETATM 31 O7A NGS A 2 4.814 1.724 9.905 1.00 0.00 O HETATM 32 O8 NGS A 2 3.918 3.109 11.603 1.00 0.00 O HETATM 33 O9 NGS A 2 4.704 4.067 9.585 1.00 0.00 O HETATM 34 O4 NGS A 2 -0.850 0.481 10.502 1.00 0.00 O HETATM 35 C1 G6S A 3 -1.195 -0.434 11.488 1.00 0.00 C HETATM 36 C2 G6S A 3 -1.152 0.273 12.836 1.00 0.00 C HETATM 37 C3 G6S A 3 -1.658 -0.647 13.937 1.00 0.00 C HETATM 38 C4 G6S A 3 -3.032 -1.196 13.575 1.00 0.00 C HETATM 39 C5 G6S A 3 -2.999 -1.820 12.184 1.00 0.00 C HETATM 40 C6 G6S A 3 -4.363 -2.283 11.718 1.00 0.00 C HETATM 41 O2 G6S A 3 0.181 0.694 13.103 1.00 0.00 O HETATM 42 O4 G6S A 3 -4.004 -0.149 13.581 1.00 0.00 O HETATM 43 O5 G6S A 3 -2.532 -0.862 11.222 1.00 0.00 O HETATM 44 O6 G6S A 3 -4.305 -2.887 10.427 1.00 0.00 O HETATM 45 S G6S A 3 -5.696 -3.414 9.836 1.00 0.00 S HETATM 46 O7 G6S A 3 -6.623 -2.305 9.720 1.00 0.00 O HETATM 47 O8 G6S A 3 -6.251 -4.416 10.725 1.00 0.00 O HETATM 48 O9 G6S A 3 -5.476 -3.998 8.527 1.00 0.00 O HETATM 49 O3 G6S A 3 -1.737 0.075 15.167 1.00 0.00 O HETATM 50 C1 NGS A 4 -0.862 -0.315 16.173 1.00 0.00 C HETATM 51 C2 NGS A 4 -0.013 0.888 16.565 1.00 0.00 C HETATM 52 C3 NGS A 4 0.864 0.553 17.762 1.00 0.00 C HETATM 53 C4 NGS A 4 0.016 0.000 18.900 1.00 0.00 C HETATM 54 C5 NGS A 4 -0.849 -1.151 18.400 1.00 0.00 C HETATM 55 C6 NGS A 4 -1.799 -1.670 19.458 1.00 0.00 C HETATM 56 O3 NGS A 4 1.548 1.729 18.198 1.00 0.00 O HETATM 57 O5 NGS A 4 -1.654 -0.720 17.291 1.00 0.00 O HETATM 58 O6 NGS A 4 -2.581 -2.764 18.978 1.00 0.00 O HETATM 59 N2 NGS A 4 0.812 1.302 15.409 1.00 0.00 N HETATM 60 C7 NGS A 4 0.629 2.562 14.876 1.00 0.00 C HETATM 61 O7 NGS A 4 -0.183 3.364 15.308 1.00 0.00 O HETATM 62 C8 NGS A 4 1.535 2.850 13.703 1.00 0.00 C HETATM 63 S NGS A 4 -4.038 -2.920 19.620 1.00 0.00 S HETATM 64 O7A NGS A 4 -4.814 -1.724 19.355 1.00 0.00 O HETATM 65 O8 NGS A 4 -3.918 -3.109 21.053 1.00 0.00 O HETATM 66 O9 NGS A 4 -4.704 -4.067 19.035 1.00 0.00 O CONECT 1 2 7 10 CONECT 2 1 3 8 CONECT 3 2 4 16 CONECT 4 3 5 9 CONECT 5 4 6 10 CONECT 6 5 11 CONECT 7 1 CONECT 8 2 CONECT 9 4 CONECT 10 1 5 CONECT 11 6 12 CONECT 12 11 13 14 15 CONECT 13 12 CONECT 14 12 CONECT 15 12 CONECT 16 3 17 CONECT 17 16 18 24 CONECT 18 17 19 26 CONECT 19 18 20 23 CONECT 20 19 21 34 CONECT 21 20 22 24 CONECT 22 21 25 CONECT 23 19 CONECT 24 17 21 CONECT 25 22 30 CONECT 26 18 27 CONECT 27 26 28 29 CONECT 28 27 CONECT 29 27 CONECT 30 25 31 32 33 CONECT 31 30 CONECT 32 30 CONECT 33 30 CONECT 34 20 35 CONECT 35 34 36 43 CONECT 36 35 37 41 CONECT 37 36 38 49 CONECT 38 37 39 42 CONECT 39 38 40 43 CONECT 40 39 44 CONECT 41 36 CONECT 42 38 CONECT 43 35 39 CONECT 44 40 45 CONECT 45 44 46 47 48 CONECT 46 45 CONECT 47 45 CONECT 48 45 CONECT 49 37 50 CONECT 50 49 51 57 CONECT 51 50 52 59 CONECT 52 51 53 56 CONECT 53 52 54 CONECT 54 53 55 57 CONECT 55 54 58 CONECT 56 52 CONECT 57 50 54 CONECT 58 55 63 CONECT 59 51 60 CONECT 60 59 61 62 CONECT 61 60 CONECT 62 60 CONECT 63 58 64 65 66 CONECT 64 63 CONECT 65 63 CONECT 66 63 MASTER 185 0 4 0 0 0 0 6 66 0 66 0 END