HEADER DNA 13-JUL-03 1UHX TITLE CRYSTAL STRUCTURE OF D(GCGAGAGC): THE BASE-INTERCALATED DUPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*GP*(CBR)P*GP*AP*GP*AP*GP*C)-3'; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS BASE-INTERCALATED DUPLEX, BASE-INTERCALATED MOTIF, SHEARED G:A PAIR, KEYWDS 2 DNA, DEOXYRIBONUCLEIC ACID EXPDTA X-RAY DIFFRACTION AUTHOR J.KONDO,S.I.UMEDA,K.FUJITA,T.SUNAMI,A.TAKENAKA REVDAT 4 27-DEC-23 1UHX 1 REMARK LINK REVDAT 3 22-OCT-14 1UHX 1 LINK VERSN REVDAT 2 24-FEB-09 1UHX 1 VERSN REVDAT 1 03-FEB-04 1UHX 0 JRNL AUTH J.KONDO,S.I.UMEDA,K.FUJITA,T.SUNAMI,A.TAKENAKA JRNL TITL X-RAY ANALYSES OF D(GCGAXAGC) CONTAINING G AND T AT X: THE JRNL TITL 2 BASE-INTERCALATED DUPLEX IS STILL STABLE EVEN IN POINT JRNL TITL 3 MUTANTS AT THE FIFTH RESIDUE. JRNL REF J.SYNCHROTRON RADIAT. V. 11 117 2004 JRNL REFN ISSN 0909-0495 JRNL PMID 14646150 JRNL DOI 10.1107/S0909049503023562 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : G. PARKINSON ET AL., (1996) ACTACRYST. D52, REMARK 3 57-64 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 2030 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 179 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE : 0.4690 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 16 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 166 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 69 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.63300 REMARK 3 B22 (A**2) : -4.63300 REMARK 3 B33 (A**2) : 9.26600 REMARK 3 B12 (A**2) : -5.48900 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.19 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.004 REMARK 3 BOND ANGLES (DEGREES) : 0.800 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.800 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1UHX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JUL-03. REMARK 100 THE DEPOSITION ID IS D_1000005847. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-18B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2142 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.32300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2-METHYL-2,4-PENTANDIOL, HEXAMINE REMARK 280 COBALT CHLORIDE, MAGNESIUM CHLORIDE, SODIUM SUCCINATE, PH 7.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.74500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.74500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.74500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 32.74500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 32.74500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 32.74500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 18.83500 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 32.62318 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 32.74500 REMARK 350 BIOMT1 3 -0.500000 -0.866025 0.000000 37.67000 REMARK 350 BIOMT2 3 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 32.74500 REMARK 350 BIOMT1 5 -0.500000 0.866025 0.000000 18.83500 REMARK 350 BIOMT2 5 -0.866025 -0.500000 0.000000 32.62318 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 37.67000 REMARK 350 BIOMT2 6 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 32.74500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 80 LIES ON A SPECIAL POSITION. REMARK 375 NA NA A 81 LIES ON A SPECIAL POSITION. REMARK 375 CO NCO A 78 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 24 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 37 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 45 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 46 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 59 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 61 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 75 LIES ON A SPECIAL POSITION. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 79 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 9 O REMARK 620 2 HOH A 27 O 89.6 REMARK 620 3 HOH A 29 O 93.3 88.8 REMARK 620 4 HOH A 47 O 86.9 90.9 179.7 REMARK 620 5 HOH A 48 O 90.3 173.7 84.9 95.3 REMARK 620 6 HOH A 67 O 179.0 89.8 87.5 92.3 90.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 79 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 80 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 81 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO A 78 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UHY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF D(GCGATAGC) DBREF 1UHX A 1 8 PDB 1UHX 1UHX 1 8 SEQRES 1 A 8 DG CBR DG DA DG DA DG DC MODRES 1UHX CBR A 2 DC HET CBR A 2 20 HET MG A 79 1 HET CL A 80 1 HET NA A 81 1 HET NCO A 78 7 HETNAM CBR 5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM NCO COBALT HEXAMMINE(III) FORMUL 1 CBR C9 H13 BR N3 O7 P FORMUL 2 MG MG 2+ FORMUL 3 CL CL 1- FORMUL 4 NA NA 1+ FORMUL 5 NCO CO H18 N6 3+ FORMUL 6 HOH *69(H2 O) LINK O3' DG A 1 P CBR A 2 1555 1555 1.61 LINK O3' CBR A 2 P DG A 3 1555 1555 1.61 LINK O HOH A 9 MG MG A 79 1555 1555 2.38 LINK O HOH A 27 MG MG A 79 1555 1555 2.40 LINK O HOH A 29 MG MG A 79 1555 1555 2.39 LINK O HOH A 47 MG MG A 79 1555 1555 2.40 LINK O HOH A 48 MG MG A 79 1555 1555 2.38 LINK O HOH A 67 MG MG A 79 1555 1555 2.39 SITE 1 AC1 6 HOH A 9 HOH A 27 HOH A 29 HOH A 47 SITE 2 AC1 6 HOH A 48 HOH A 67 SITE 1 AC2 2 DA A 4 NCO A 78 SITE 1 AC3 1 DG A 5 SITE 1 AC4 4 CBR A 2 DG A 3 HOH A 12 CL A 80 CRYST1 37.670 37.670 65.490 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026546 0.015327 0.000000 0.00000 SCALE2 0.000000 0.030653 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015270 0.00000 ATOM 1 O5' DG A 1 16.672 14.065 -1.406 1.00 35.77 O ATOM 2 C5' DG A 1 17.713 14.770 -2.080 1.00 20.88 C ATOM 3 C4' DG A 1 18.359 15.814 -1.199 1.00 19.83 C ATOM 4 O4' DG A 1 17.384 16.803 -0.793 1.00 10.82 O ATOM 5 C3' DG A 1 18.997 15.293 0.088 1.00 14.39 C ATOM 6 O3' DG A 1 20.188 16.040 0.351 1.00 15.71 O ATOM 7 C2' DG A 1 17.917 15.517 1.137 1.00 13.77 C ATOM 8 C1' DG A 1 17.103 16.698 0.597 1.00 10.04 C ATOM 9 N9 DG A 1 15.656 16.563 0.746 1.00 13.43 N ATOM 10 C8 DG A 1 14.913 15.410 0.644 1.00 7.88 C ATOM 11 N7 DG A 1 13.632 15.607 0.819 1.00 10.45 N ATOM 12 C5 DG A 1 13.521 16.971 1.052 1.00 14.43 C ATOM 13 C6 DG A 1 12.373 17.774 1.319 1.00 5.97 C ATOM 14 O6 DG A 1 11.193 17.425 1.412 1.00 8.57 O ATOM 15 N1 DG A 1 12.714 19.112 1.491 1.00 7.61 N ATOM 16 C2 DG A 1 13.990 19.615 1.417 1.00 13.49 C ATOM 17 N2 DG A 1 14.114 20.939 1.583 1.00 7.24 N ATOM 18 N3 DG A 1 15.065 18.877 1.188 1.00 8.46 N ATOM 19 C4 DG A 1 14.760 17.576 1.013 1.00 14.67 C HETATM 20 BR CBR A 2 15.283 13.751 3.838 1.00 14.08 BR HETATM 21 P CBR A 2 21.022 15.792 1.707 1.00 18.14 P HETATM 22 OP1 CBR A 2 22.392 16.286 1.440 1.00 24.00 O HETATM 23 OP2 CBR A 2 20.825 14.410 2.225 1.00 18.50 O HETATM 24 O5' CBR A 2 20.345 16.803 2.734 1.00 17.77 O HETATM 25 N1 CBR A 2 16.366 17.714 4.516 1.00 12.62 N HETATM 26 C6 CBR A 2 16.398 16.353 4.358 1.00 9.34 C HETATM 27 C2 CBR A 2 15.136 18.391 4.545 1.00 11.76 C HETATM 28 O2 CBR A 2 15.134 19.622 4.652 1.00 10.72 O HETATM 29 N3 CBR A 2 13.987 17.687 4.445 1.00 17.88 N HETATM 30 C4 CBR A 2 14.028 16.359 4.309 1.00 18.32 C HETATM 31 N4 CBR A 2 12.869 15.698 4.250 1.00 8.77 N HETATM 32 C5 CBR A 2 15.260 15.648 4.241 1.00 18.96 C HETATM 33 C2' CBR A 2 18.689 17.902 5.537 1.00 11.56 C HETATM 34 C5' CBR A 2 20.398 18.210 2.503 1.00 14.53 C HETATM 35 C4' CBR A 2 19.593 18.937 3.553 1.00 18.95 C HETATM 36 O4' CBR A 2 18.189 18.630 3.388 1.00 13.44 O HETATM 37 C1' CBR A 2 17.603 18.504 4.661 1.00 9.83 C HETATM 38 C3' CBR A 2 19.954 18.549 4.990 1.00 13.94 C HETATM 39 O3' CBR A 2 20.335 19.720 5.721 1.00 21.73 O ATOM 40 P DG A 3 20.978 19.577 7.189 1.00 25.08 P ATOM 41 OP1 DG A 3 21.834 20.763 7.398 1.00 28.49 O ATOM 42 OP2 DG A 3 21.559 18.217 7.338 1.00 29.99 O ATOM 43 O5' DG A 3 19.714 19.690 8.150 1.00 17.91 O ATOM 44 C5' DG A 3 18.675 20.625 7.865 1.00 19.06 C ATOM 45 C4' DG A 3 17.392 20.218 8.552 1.00 19.89 C ATOM 46 O4' DG A 3 16.885 18.980 7.991 1.00 17.40 O ATOM 47 C3' DG A 3 17.487 19.987 10.065 1.00 18.97 C ATOM 48 O3' DG A 3 16.294 20.484 10.681 1.00 23.55 O ATOM 49 C2' DG A 3 17.492 18.472 10.171 1.00 20.49 C ATOM 50 C1' DG A 3 16.514 18.138 9.066 1.00 18.47 C ATOM 51 N9 DG A 3 16.523 16.754 8.606 1.00 14.49 N ATOM 52 C8 DG A 3 17.599 15.901 8.517 1.00 12.82 C ATOM 53 N7 DG A 3 17.271 14.702 8.118 1.00 13.24 N ATOM 54 C5 DG A 3 15.896 14.769 7.924 1.00 7.31 C ATOM 55 C6 DG A 3 14.968 13.770 7.509 1.00 8.17 C ATOM 56 O6 DG A 3 15.179 12.576 7.241 1.00 9.49 O ATOM 57 N1 DG A 3 13.675 14.277 7.431 1.00 12.60 N ATOM 58 C2 DG A 3 13.311 15.570 7.729 1.00 11.03 C ATOM 59 N2 DG A 3 12.009 15.869 7.588 1.00 15.29 N ATOM 60 N3 DG A 3 14.161 16.502 8.133 1.00 15.71 N ATOM 61 C4 DG A 3 15.425 16.037 8.204 1.00 15.76 C ATOM 62 P DA A 4 16.285 20.853 12.245 1.00 19.92 P ATOM 63 OP1 DA A 4 16.535 22.313 12.327 1.00 29.28 O ATOM 64 OP2 DA A 4 17.169 19.915 12.981 1.00 30.05 O ATOM 65 O5' DA A 4 14.783 20.560 12.685 1.00 18.94 O ATOM 66 C5' DA A 4 13.688 21.031 11.903 1.00 14.88 C ATOM 67 C4' DA A 4 12.642 19.949 11.760 1.00 17.63 C ATOM 68 O4' DA A 4 13.109 18.878 10.916 1.00 16.07 O ATOM 69 C3' DA A 4 12.237 19.275 13.061 1.00 20.56 C ATOM 70 O3' DA A 4 11.207 20.037 13.688 1.00 29.60 O ATOM 71 C2' DA A 4 11.718 17.925 12.599 1.00 13.11 C ATOM 72 C1' DA A 4 12.497 17.655 11.308 1.00 10.44 C ATOM 73 N9 DA A 4 13.555 16.651 11.428 1.00 13.87 N ATOM 74 C8 DA A 4 14.862 16.846 11.805 1.00 10.93 C ATOM 75 N7 DA A 4 15.591 15.753 11.771 1.00 17.30 N ATOM 76 C5 DA A 4 14.699 14.772 11.358 1.00 16.50 C ATOM 77 C6 DA A 4 14.852 13.391 11.122 1.00 13.68 C ATOM 78 N6 DA A 4 16.010 12.740 11.261 1.00 22.13 N ATOM 79 N1 DA A 4 13.762 12.696 10.729 1.00 19.50 N ATOM 80 C2 DA A 4 12.601 13.353 10.584 1.00 23.97 C ATOM 81 N3 DA A 4 12.333 14.647 10.769 1.00 20.57 N ATOM 82 C4 DA A 4 13.438 15.308 11.158 1.00 13.15 C ATOM 83 P DG A 5 11.429 20.589 15.177 1.00 34.54 P ATOM 84 OP1 DG A 5 10.248 21.426 15.517 1.00 40.68 O ATOM 85 OP2 DG A 5 12.793 21.171 15.276 1.00 34.73 O ATOM 86 O5' DG A 5 11.385 19.280 16.072 1.00 19.51 O ATOM 87 C5' DG A 5 11.258 19.380 17.485 1.00 38.84 C ATOM 88 C4' DG A 5 10.807 18.059 18.058 1.00 35.67 C ATOM 89 O4' DG A 5 11.787 17.033 17.768 1.00 41.46 O ATOM 90 C3' DG A 5 10.607 18.056 19.570 1.00 40.81 C ATOM 91 O3' DG A 5 9.375 17.411 19.888 1.00 44.24 O ATOM 92 C2' DG A 5 11.791 17.268 20.100 1.00 37.51 C ATOM 93 C1' DG A 5 12.133 16.337 18.951 1.00 31.82 C ATOM 94 N9 DG A 5 13.554 16.016 18.876 1.00 29.98 N ATOM 95 C8 DG A 5 14.603 16.881 19.072 1.00 34.58 C ATOM 96 N7 DG A 5 15.768 16.307 18.955 1.00 36.03 N ATOM 97 C5 DG A 5 15.472 14.985 18.660 1.00 28.17 C ATOM 98 C6 DG A 5 16.334 13.881 18.428 1.00 31.74 C ATOM 99 O6 DG A 5 17.570 13.855 18.439 1.00 31.92 O ATOM 100 N1 DG A 5 15.617 12.719 18.162 1.00 20.60 N ATOM 101 C2 DG A 5 14.247 12.628 18.126 1.00 22.47 C ATOM 102 N2 DG A 5 13.744 11.417 17.855 1.00 36.71 N ATOM 103 N3 DG A 5 13.431 13.648 18.341 1.00 33.68 N ATOM 104 C4 DG A 5 14.109 14.789 18.602 1.00 30.62 C ATOM 105 P DA A 6 8.293 18.176 20.788 1.00 32.41 P ATOM 106 OP1 DA A 6 7.711 19.260 19.959 1.00 39.11 O ATOM 107 OP2 DA A 6 8.934 18.511 22.086 1.00 44.95 O ATOM 108 O5' DA A 6 7.171 17.077 21.042 1.00 34.86 O ATOM 109 C5' DA A 6 6.360 16.600 19.973 1.00 24.36 C ATOM 110 C4' DA A 6 5.106 15.960 20.519 1.00 25.91 C ATOM 111 O4' DA A 6 5.426 14.719 21.190 1.00 20.41 O ATOM 112 C3' DA A 6 4.365 16.803 21.553 1.00 20.10 C ATOM 113 O3' DA A 6 2.964 16.520 21.474 1.00 27.67 O ATOM 114 C2' DA A 6 4.952 16.314 22.867 1.00 10.67 C ATOM 115 C1' DA A 6 5.148 14.830 22.585 1.00 17.28 C ATOM 116 N9 DA A 6 6.244 14.178 23.303 1.00 14.84 N ATOM 117 C8 DA A 6 7.462 14.696 23.676 1.00 10.35 C ATOM 118 N7 DA A 6 8.249 13.823 24.265 1.00 10.21 N ATOM 119 C5 DA A 6 7.493 12.656 24.291 1.00 10.89 C ATOM 120 C6 DA A 6 7.761 11.362 24.777 1.00 12.77 C ATOM 121 N6 DA A 6 8.919 11.006 25.342 1.00 19.89 N ATOM 122 N1 DA A 6 6.787 10.430 24.659 1.00 18.60 N ATOM 123 C2 DA A 6 5.630 10.783 24.082 1.00 12.63 C ATOM 124 N3 DA A 6 5.265 11.961 23.578 1.00 12.22 N ATOM 125 C4 DA A 6 6.253 12.865 23.716 1.00 13.17 C ATOM 126 P DG A 7 1.926 17.388 22.338 1.00 27.66 P ATOM 127 OP1 DG A 7 0.629 17.385 21.615 1.00 31.32 O ATOM 128 OP2 DG A 7 2.581 18.678 22.675 1.00 24.06 O ATOM 129 O5' DG A 7 1.755 16.543 23.673 1.00 22.00 O ATOM 130 C5' DG A 7 1.323 15.186 23.619 1.00 10.81 C ATOM 131 C4' DG A 7 1.644 14.489 24.918 1.00 25.34 C ATOM 132 O4' DG A 7 3.074 14.430 25.082 1.00 18.16 O ATOM 133 C3' DG A 7 1.119 15.197 26.168 1.00 29.05 C ATOM 134 O3' DG A 7 -0.054 14.539 26.650 1.00 35.64 O ATOM 135 C2' DG A 7 2.254 15.089 27.177 1.00 11.88 C ATOM 136 C1' DG A 7 3.334 14.284 26.456 1.00 11.43 C ATOM 137 N9 DG A 7 4.694 14.748 26.700 1.00 17.92 N ATOM 138 C8 DG A 7 5.180 16.029 26.574 1.00 9.68 C ATOM 139 N7 DG A 7 6.445 16.127 26.880 1.00 11.51 N ATOM 140 C5 DG A 7 6.815 14.834 27.222 1.00 12.87 C ATOM 141 C6 DG A 7 8.064 14.317 27.648 1.00 10.71 C ATOM 142 O6 DG A 7 9.123 14.922 27.823 1.00 12.17 O ATOM 143 N1 DG A 7 7.997 12.946 27.887 1.00 5.89 N ATOM 144 C2 DG A 7 6.868 12.175 27.745 1.00 19.68 C ATOM 145 N2 DG A 7 6.991 10.873 28.037 1.00 8.92 N ATOM 146 N3 DG A 7 5.697 12.647 27.349 1.00 13.80 N ATOM 147 C4 DG A 7 5.745 13.972 27.110 1.00 14.13 C ATOM 148 P DC A 8 -0.874 15.170 27.880 1.00 25.44 P ATOM 149 OP1 DC A 8 -2.309 14.916 27.599 1.00 39.26 O ATOM 150 OP2 DC A 8 -0.409 16.559 28.106 1.00 26.52 O ATOM 151 O5' DC A 8 -0.428 14.264 29.113 1.00 26.11 O ATOM 152 C5' DC A 8 -0.680 12.859 29.106 1.00 29.59 C ATOM 153 C4' DC A 8 0.333 12.126 29.957 1.00 23.72 C ATOM 154 O4' DC A 8 1.674 12.289 29.455 1.00 17.95 O ATOM 155 C3' DC A 8 0.443 12.553 31.413 1.00 27.30 C ATOM 156 O3' DC A 8 -0.661 12.150 32.228 1.00 29.03 O ATOM 157 C2' DC A 8 1.783 11.960 31.814 1.00 15.08 C ATOM 158 C1' DC A 8 2.585 11.945 30.504 1.00 11.39 C ATOM 159 N1 DC A 8 3.698 12.915 30.487 1.00 16.54 N ATOM 160 C2 DC A 8 5.015 12.442 30.629 1.00 16.19 C ATOM 161 O2 DC A 8 5.208 11.223 30.737 1.00 12.67 O ATOM 162 N3 DC A 8 6.040 13.330 30.647 1.00 10.13 N ATOM 163 C4 DC A 8 5.793 14.637 30.527 1.00 14.22 C ATOM 164 N4 DC A 8 6.833 15.475 30.561 1.00 14.09 N ATOM 165 C5 DC A 8 4.464 15.144 30.369 1.00 14.28 C ATOM 166 C6 DC A 8 3.459 14.254 30.353 1.00 13.98 C TER 167 DC A 8 HETATM 168 MG MG A 79 9.503 19.109 27.501 1.00 14.75 MG HETATM 169 CL CL A 80 18.835 10.875 21.748 0.33 26.90 CL HETATM 170 NA NA A 81 18.823 10.849 17.694 0.33 51.66 NA HETATM 171 CO NCO A 78 18.835 10.874 6.905 0.33 6.47 CO HETATM 172 N1 NCO A 78 19.436 12.344 8.040 0.33 9.13 N HETATM 173 N2 NCO A 78 17.847 12.135 5.790 0.33 4.24 N HETATM 174 N3 NCO A 78 17.245 10.665 8.021 0.33 9.46 N HETATM 175 N4 NCO A 78 19.830 9.612 8.015 0.33 9.48 N HETATM 176 N5 NCO A 78 20.426 11.082 5.795 0.33 4.21 N HETATM 177 N6 NCO A 78 18.238 9.403 5.774 0.33 4.32 N HETATM 178 O HOH A 9 7.152 19.140 27.126 1.00 43.59 O HETATM 179 O HOH A 10 16.993 21.300 2.586 1.00 16.12 O HETATM 180 O HOH A 11 13.770 15.720 28.617 1.00 17.73 O HETATM 181 O HOH A 12 19.528 14.306 4.940 1.00 20.45 O HETATM 182 O HOH A 13 15.355 22.762 7.156 1.00 17.60 O HETATM 183 O HOH A 14 11.366 16.409 30.244 1.00 34.78 O HETATM 184 O HOH A 15 2.518 20.278 33.336 1.00 19.28 O HETATM 185 O HOH A 16 6.796 19.074 32.890 1.00 21.39 O HETATM 186 O HOH A 17 10.346 16.574 22.956 1.00 24.58 O HETATM 187 O HOH A 18 3.816 19.417 26.080 1.00 30.25 O HETATM 188 O HOH A 19 6.258 18.282 30.330 1.00 18.80 O HETATM 189 O HOH A 20 6.732 21.806 29.767 1.00 34.44 O HETATM 190 O HOH A 21 16.764 15.686 25.746 1.00 26.31 O HETATM 191 O HOH A 22 3.743 18.940 18.109 1.00 61.51 O HETATM 192 O HOH A 23 1.650 5.911 16.576 1.00 75.26 O HETATM 193 O HOH A 24 9.606 16.200 16.375 0.50 87.55 O HETATM 194 O HOH A 25 -2.977 15.466 23.050 1.00 35.37 O HETATM 195 O HOH A 26 12.565 22.124 27.883 1.00 61.62 O HETATM 196 O HOH A 27 9.202 17.379 29.134 1.00 25.82 O HETATM 197 O HOH A 28 8.737 23.114 32.161 1.00 37.56 O HETATM 198 O HOH A 29 9.882 17.416 25.851 1.00 55.22 O HETATM 199 O HOH A 30 2.535 21.699 28.798 1.00 40.48 O HETATM 200 O HOH A 31 3.720 10.494 27.058 1.00 24.14 O HETATM 201 O HOH A 32 3.488 8.943 21.059 1.00 45.65 O HETATM 202 O HOH A 33 4.378 20.875 30.930 1.00 28.51 O HETATM 203 O HOH A 34 13.496 16.300 25.980 1.00 37.74 O HETATM 204 O HOH A 35 4.958 8.550 28.290 1.00 42.50 O HETATM 205 O HOH A 36 17.426 28.222 7.136 1.00 51.24 O HETATM 206 O HOH A 37 16.854 29.184 -0.003 0.50 50.35 O HETATM 207 O HOH A 38 14.004 27.958 7.263 1.00 63.85 O HETATM 208 O HOH A 39 17.043 22.259 5.294 1.00 47.51 O HETATM 209 O HOH A 40 16.629 16.607 22.676 1.00 29.18 O HETATM 210 O HOH A 41 9.362 19.591 31.962 1.00 34.63 O HETATM 211 O HOH A 42 12.785 30.239 4.582 1.00 55.97 O HETATM 212 O HOH A 43 11.546 24.363 20.946 1.00 62.49 O HETATM 213 O HOH A 44 12.010 23.402 25.028 1.00 37.48 O HETATM 214 O HOH A 45 0.000 19.863 16.374 0.50 52.75 O HETATM 215 O HOH A 46 0.000 21.674 22.512 0.33 89.97 O HETATM 216 O HOH A 47 9.129 20.797 29.163 1.00 36.37 O HETATM 217 O HOH A 48 9.821 20.637 25.702 1.00 31.12 O HETATM 218 O HOH A 49 19.349 14.527 20.628 1.00 31.69 O HETATM 219 O HOH A 50 11.665 27.193 22.381 1.00 54.88 O HETATM 220 O HOH A 51 5.285 20.223 19.787 1.00 43.45 O HETATM 221 O HOH A 52 17.095 18.799 21.061 1.00 36.19 O HETATM 222 O HOH A 53 4.515 8.573 31.342 1.00 42.67 O HETATM 223 O HOH A 54 14.146 25.127 25.655 1.00 87.36 O HETATM 224 O HOH A 55 3.937 12.047 19.786 1.00 29.83 O HETATM 225 O HOH A 56 1.926 23.516 25.436 1.00 83.59 O HETATM 226 O HOH A 57 -3.444 16.791 25.730 1.00 31.84 O HETATM 227 O HOH A 58 5.903 7.886 18.779 1.00 46.51 O HETATM 228 O HOH A 59 0.000 21.749 33.037 0.33 28.11 O HETATM 229 O HOH A 60 9.452 21.322 34.063 1.00 40.70 O HETATM 230 O HOH A 61 0.000 21.718 19.977 0.33 63.25 O HETATM 231 O HOH A 62 3.884 18.665 29.048 1.00 32.33 O HETATM 232 O HOH A 63 21.943 18.584 17.336 1.00 23.18 O HETATM 233 O HOH A 64 -1.791 17.574 17.980 1.00 44.55 O HETATM 234 O HOH A 65 0.275 15.656 19.351 1.00 81.23 O HETATM 235 O HOH A 66 20.236 21.184 16.439 1.00 59.25 O HETATM 236 O HOH A 67 11.857 19.084 27.918 1.00 38.44 O HETATM 237 O HOH A 68 12.090 21.309 20.801 1.00 47.74 O HETATM 238 O HOH A 69 10.300 22.495 36.194 1.00 44.00 O HETATM 239 O HOH A 70 14.095 23.920 22.090 1.00 46.10 O HETATM 240 O HOH A 71 15.699 22.081 22.985 1.00 37.13 O HETATM 241 O HOH A 72 18.011 17.335 18.190 1.00 40.09 O HETATM 242 O HOH A 73 11.955 25.034 27.227 1.00 78.94 O HETATM 243 O HOH A 74 16.933 24.071 8.926 1.00 49.89 O HETATM 244 O HOH A 75 0.000 21.761 25.045 0.33 45.52 O HETATM 245 O HOH A 76 17.186 31.001 28.434 1.00 43.29 O HETATM 246 O HOH A 77 18.011 26.721 9.955 1.00 48.28 O CONECT 6 21 CONECT 20 32 CONECT 21 6 22 23 24 CONECT 22 21 CONECT 23 21 CONECT 24 21 34 CONECT 25 26 27 37 CONECT 26 25 32 CONECT 27 25 28 29 CONECT 28 27 CONECT 29 27 30 CONECT 30 29 31 32 CONECT 31 30 CONECT 32 20 26 30 CONECT 33 37 38 CONECT 34 24 35 CONECT 35 34 36 38 CONECT 36 35 37 CONECT 37 25 33 36 CONECT 38 33 35 39 CONECT 39 38 40 CONECT 40 39 CONECT 168 178 196 198 216 CONECT 168 217 236 CONECT 171 172 173 174 175 CONECT 171 176 177 CONECT 172 171 CONECT 173 171 CONECT 174 171 CONECT 175 171 CONECT 176 171 CONECT 177 171 CONECT 178 168 CONECT 196 168 CONECT 198 168 CONECT 216 168 CONECT 217 168 CONECT 236 168 MASTER 310 0 5 0 0 0 5 6 245 1 38 1 END