HEADER DNA 18-AUG-88 1VTW TITLE AT BASE PAIRS ARE LESS STABLE THAN GC BASE PAIRS IN Z-DNA: THE CRYSTAL TITLE 2 STRUCTURE OF D(M(5)CGTAM(5)CG) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*(CH3)CP*GP*TP*AP*(CH3)CP*G)-3'); COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS Z-DNA, DOUBLE HELIX, MODIFIED, DNA EXPDTA X-RAY DIFFRACTION AUTHOR A.H.-J.WANG,T.HAKOSHIMA,G.A.VAN DER MAREL,J.H.VAN BOOM,A.RICH REVDAT 2 27-DEC-23 1VTW 1 LINK REVDAT 1 13-JUL-11 1VTW 0 JRNL AUTH A.H.-J.WANG,T.HAKOSHIMA,G.A.VAN DER MAREL,J.H.VAN BOOM, JRNL AUTH 2 A.RICH JRNL TITL AT BASE PAIRS ARE LESS STABLE THAN GC BASE PAIRS IN Z-DNA: JRNL TITL 2 THE CRYSTAL STRUCTURE OF D(M(5)CGTAM(5)CG) JRNL REF CELL(CAMBRIDGE,MASS.) V. 37 321 1984 JRNL REFN ISSN 0092-8674 JRNL PMID 6722876 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NUCLSQ REMARK 3 AUTHORS : WESTHOF,DUMAS,MORAS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 5412 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 244 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 SUGAR-BASE BOND DISTANCE (A) : NULL ; NULL REMARK 3 SUGAR-BASE BOND ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 PHOSPHATE BONDS DISTANCE (A) : NULL ; NULL REMARK 3 PHOSPHATE BOND ANGLE, H-BOND (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION CONTACT (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION CONTACT (A) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 SUGAR-BASE BONDS (A**2) : NULL ; NULL REMARK 3 SUGAR-BASE ANGLES (A**2) : NULL ; NULL REMARK 3 PHOSPHATE BONDS (A**2) : NULL ; NULL REMARK 3 PHOSPHATE BOND ANGLE, H-BOND (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1VTW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000003053. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 263.00 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : DIFFRACTOMETER REMARK 200 DETECTOR MANUFACTURER : NICOLET P3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5412 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 26.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 8.95500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.48000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 15.21500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 22.48000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 8.95500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 15.21500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 2110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG A 2 P DG A 2 OP2 -0.112 REMARK 500 DG A 2 C4' DG A 2 C3' 0.089 REMARK 500 DG A 2 C3' DG A 2 C2' -0.111 REMARK 500 DG A 2 C2' DG A 2 C1' 0.060 REMARK 500 DG A 2 C6 DG A 2 N1 -0.049 REMARK 500 DG A 2 C2 DG A 2 N2 -0.082 REMARK 500 DT A 3 O4' DT A 3 C4' 0.058 REMARK 500 DT A 3 O3' DT A 3 C3' -0.059 REMARK 500 DA A 4 P DA A 4 O5' 0.081 REMARK 500 DA A 4 C5' DA A 4 C4' 0.077 REMARK 500 DA A 4 C3' DA A 4 C2' -0.095 REMARK 500 DA A 4 C4 DA A 4 C5 -0.044 REMARK 500 DA A 4 C8 DA A 4 N9 -0.070 REMARK 500 DG A 6 P DG A 6 O5' 0.097 REMARK 500 DG A 6 C6 DG A 6 N1 -0.046 REMARK 500 DG B 8 P DG B 8 OP1 -0.119 REMARK 500 DG B 8 C6 DG B 8 N1 -0.046 REMARK 500 DG B 8 C2 DG B 8 N2 -0.078 REMARK 500 DT B 9 C5' DT B 9 C4' 0.085 REMARK 500 DT B 9 C5 DT B 9 C6 -0.056 REMARK 500 DA B 10 O4' DA B 10 C4' -0.100 REMARK 500 DA B 10 C2 DA B 10 N3 0.059 REMARK 500 DA B 10 C8 DA B 10 N9 -0.051 REMARK 500 DA B 10 O3' 5CM B 11 P -0.081 REMARK 500 DG B 12 C3' DG B 12 C2' -0.064 REMARK 500 DG B 12 O4' DG B 12 C1' 0.066 REMARK 500 DG B 12 C2 DG B 12 N2 -0.092 REMARK 500 DG B 12 C6 DG B 12 O6 0.057 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG A 2 OP1 - P - OP2 ANGL. DEV. = 13.5 DEGREES REMARK 500 DG A 2 O5' - P - OP1 ANGL. DEV. = -9.5 DEGREES REMARK 500 DG A 2 C4 - C5 - C6 ANGL. DEV. = -4.4 DEGREES REMARK 500 DG A 2 C5 - C6 - N1 ANGL. DEV. = 5.6 DEGREES REMARK 500 DG A 2 N3 - C2 - N2 ANGL. DEV. = -6.8 DEGREES REMARK 500 DG A 2 C5 - C6 - O6 ANGL. DEV. = -4.8 DEGREES REMARK 500 DT A 3 C2 - N3 - C4 ANGL. DEV. = -5.5 DEGREES REMARK 500 DT A 3 N3 - C4 - C5 ANGL. DEV. = 5.8 DEGREES REMARK 500 DT A 3 N3 - C2 - O2 ANGL. DEV. = -3.8 DEGREES REMARK 500 DA A 4 OP1 - P - OP2 ANGL. DEV. = 10.0 DEGREES REMARK 500 DA A 4 O5' - C5' - C4' ANGL. DEV. = -10.7 DEGREES REMARK 500 DA A 4 O4' - C4' - C3' ANGL. DEV. = -2.4 DEGREES REMARK 500 DA A 4 C1' - O4' - C4' ANGL. DEV. = 4.7 DEGREES REMARK 500 DA A 4 C3' - C2' - C1' ANGL. DEV. = 8.0 DEGREES REMARK 500 DA A 4 O4' - C1' - C2' ANGL. DEV. = -5.8 DEGREES REMARK 500 DG A 6 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DG A 6 C6 - N1 - C2 ANGL. DEV. = -5.2 DEGREES REMARK 500 DG A 6 N1 - C2 - N3 ANGL. DEV. = 4.5 DEGREES REMARK 500 DG A 6 C5 - C6 - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 DG A 6 C5 - C6 - O6 ANGL. DEV. = -5.3 DEGREES REMARK 500 DG B 8 OP1 - P - OP2 ANGL. DEV. = 9.8 DEGREES REMARK 500 DG B 8 C6 - N1 - C2 ANGL. DEV. = -6.5 DEGREES REMARK 500 DG B 8 N1 - C2 - N3 ANGL. DEV. = 4.7 DEGREES REMARK 500 DG B 8 C4 - C5 - C6 ANGL. DEV. = -4.8 DEGREES REMARK 500 DG B 8 C5 - C6 - N1 ANGL. DEV. = 6.7 DEGREES REMARK 500 DG B 8 C4 - C5 - N7 ANGL. DEV. = 4.8 DEGREES REMARK 500 DG B 8 C5 - N7 - C8 ANGL. DEV. = -4.3 DEGREES REMARK 500 DG B 8 N9 - C4 - C5 ANGL. DEV. = -3.4 DEGREES REMARK 500 DG B 8 N3 - C2 - N2 ANGL. DEV. = -5.6 DEGREES REMARK 500 DG B 8 N1 - C6 - O6 ANGL. DEV. = -4.5 DEGREES REMARK 500 DT B 9 N1 - C2 - N3 ANGL. DEV. = 5.2 DEGREES REMARK 500 DT B 9 C2 - N3 - C4 ANGL. DEV. = -5.1 DEGREES REMARK 500 DT B 9 N3 - C4 - O4 ANGL. DEV. = -4.6 DEGREES REMARK 500 DA B 10 O5' - C5' - C4' ANGL. DEV. = -9.3 DEGREES REMARK 500 DA B 10 C1' - O4' - C4' ANGL. DEV. = 9.5 DEGREES REMARK 500 DA B 10 O4' - C1' - N9 ANGL. DEV. = 3.6 DEGREES REMARK 500 DA B 10 C2 - N3 - C4 ANGL. DEV. = -5.8 DEGREES REMARK 500 DA B 10 C4 - C5 - N7 ANGL. DEV. = 4.0 DEGREES REMARK 500 DA B 10 C5 - N7 - C8 ANGL. DEV. = -7.1 DEGREES REMARK 500 DA B 10 N7 - C8 - N9 ANGL. DEV. = 8.1 DEGREES REMARK 500 DA B 10 C8 - N9 - C4 ANGL. DEV. = -4.4 DEGREES REMARK 500 DA B 10 C6 - C5 - N7 ANGL. DEV. = -5.2 DEGREES REMARK 500 DG B 12 O5' - C5' - C4' ANGL. DEV. = -5.3 DEGREES REMARK 500 DG B 12 P - O5' - C5' ANGL. DEV. = -11.0 DEGREES REMARK 500 DG B 12 O4' - C1' - N9 ANGL. DEV. = -4.8 DEGREES REMARK 500 DG B 12 C6 - N1 - C2 ANGL. DEV. = -7.2 DEGREES REMARK 500 DG B 12 N1 - C2 - N3 ANGL. DEV. = 3.9 DEGREES REMARK 500 DG B 12 C5 - C6 - N1 ANGL. DEV. = 7.7 DEGREES REMARK 500 DG B 12 N1 - C6 - O6 ANGL. DEV. = -4.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL DBREF 1VTW A 1 6 PDB 1VTW 1VTW 1 6 DBREF 1VTW B 7 12 PDB 1VTW 1VTW 7 12 SEQRES 1 A 6 5CM DG DT DA 5CM DG SEQRES 1 B 6 5CM DG DT DA 5CM DG MODRES 1VTW 5CM A 1 DC MODRES 1VTW 5CM A 5 DC MODRES 1VTW 5CM B 7 DC MODRES 1VTW 5CM B 11 DC HET 5CM A 1 17 HET 5CM A 5 20 HET 5CM B 7 17 HET 5CM B 11 20 HETNAM 5CM 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE FORMUL 1 5CM 4(C10 H16 N3 O7 P) LINK O3' 5CM A 1 P DG A 2 1555 1555 1.61 LINK O3' DA A 4 P 5CM A 5 1555 1555 1.59 LINK O3' 5CM A 5 P DG A 6 1555 1555 1.57 LINK O3' 5CM B 7 P DG B 8 1555 1555 1.65 LINK O3' DA B 10 P 5CM B 11 1555 1555 1.53 LINK O3' 5CM B 11 P DG B 12 1555 1555 1.58 CRYST1 17.910 30.430 44.960 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.055835 0.000000 0.000000 0.00000 SCALE2 0.000000 0.032862 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022242 0.00000 HETATM 1 N1 5CM A 1 11.554 12.644 -3.192 1.00 6.30 N HETATM 2 C2 5CM A 1 12.872 12.854 -3.430 1.00 6.70 C HETATM 3 N3 5CM A 1 13.633 11.709 -3.556 1.00 5.60 N HETATM 4 C4 5CM A 1 13.081 10.453 -3.444 1.00 6.10 C HETATM 5 C5 5CM A 1 11.683 10.310 -3.228 1.00 5.40 C HETATM 6 C5A 5CM A 1 11.043 8.913 -3.147 1.00 5.20 C HETATM 7 C6 5CM A 1 10.954 11.423 -3.071 1.00 5.20 C HETATM 8 O2 5CM A 1 13.361 13.961 -3.516 1.00 6.50 O HETATM 9 N4 5CM A 1 13.932 9.430 -3.655 1.00 5.50 N HETATM 10 C1' 5CM A 1 10.712 13.940 -3.008 1.00 6.60 C HETATM 11 C2' 5CM A 1 10.098 14.342 -4.411 1.00 8.10 C HETATM 12 C3' 5CM A 1 8.953 15.203 -3.894 1.00 9.40 C HETATM 13 C4' 5CM A 1 8.505 14.497 -2.563 1.00 7.70 C HETATM 14 O4' 5CM A 1 9.628 13.706 -2.194 1.00 6.40 O HETATM 15 O3' 5CM A 1 9.516 16.502 -3.565 1.00 12.00 O HETATM 16 C5' 5CM A 1 7.295 13.672 -2.594 1.00 8.70 C HETATM 17 O5' 5CM A 1 7.454 12.747 -3.799 1.00 10.50 O ATOM 18 P DG A 2 8.670 17.844 -3.844 1.00 13.90 P ATOM 19 OP1 DG A 2 7.719 17.607 -4.901 1.00 15.40 O ATOM 20 OP2 DG A 2 9.571 18.851 -3.601 1.00 15.90 O ATOM 21 O5' DG A 2 7.583 17.878 -2.635 1.00 12.10 O ATOM 22 C5' DG A 2 8.006 18.103 -1.416 1.00 11.00 C ATOM 23 C4' DG A 2 6.818 17.935 -0.454 1.00 10.40 C ATOM 24 O4' DG A 2 6.254 16.624 -0.495 1.00 9.50 O ATOM 25 C3' DG A 2 7.286 18.078 1.088 1.00 10.90 C ATOM 26 O3' DG A 2 7.185 19.533 1.286 1.00 12.90 O ATOM 27 C2' DG A 2 6.430 17.239 1.821 1.00 9.50 C ATOM 28 C1' DG A 2 5.925 16.171 0.773 1.00 9.50 C ATOM 29 N9 DG A 2 6.528 14.868 0.868 1.00 8.90 N ATOM 30 C8 DG A 2 5.801 13.706 0.904 1.00 8.80 C ATOM 31 N7 DG A 2 6.559 12.616 0.980 1.00 8.80 N ATOM 32 C5 DG A 2 7.820 13.106 0.940 1.00 9.00 C ATOM 33 C6 DG A 2 9.138 12.482 0.895 1.00 8.40 C ATOM 34 O6 DG A 2 9.329 11.223 0.940 1.00 8.80 O ATOM 35 N1 DG A 2 10.200 13.301 0.841 1.00 7.80 N ATOM 36 C2 DG A 2 10.067 14.619 0.728 1.00 7.80 C ATOM 37 N2 DG A 2 11.070 15.373 0.629 1.00 8.00 N ATOM 38 N3 DG A 2 8.887 15.300 0.769 1.00 8.20 N ATOM 39 C4 DG A 2 7.837 14.479 0.854 1.00 8.70 C ATOM 40 P DT A 3 8.495 20.415 1.708 1.00 14.60 P ATOM 41 OP1 DT A 3 7.956 21.745 2.077 1.00 15.90 O ATOM 42 OP2 DT A 3 9.582 20.449 0.688 1.00 14.80 O ATOM 43 O5' DT A 3 8.831 19.713 3.102 1.00 10.60 O ATOM 44 C5' DT A 3 9.399 20.434 4.244 1.00 11.00 C ATOM 45 C4' DT A 3 10.753 19.877 4.505 1.00 10.50 C ATOM 46 O4' DT A 3 10.438 18.504 5.040 1.00 8.50 O ATOM 47 C3' DT A 3 11.625 19.603 3.233 1.00 9.70 C ATOM 48 O3' DT A 3 12.913 19.746 3.646 1.00 12.00 O ATOM 49 C2' DT A 3 11.527 18.045 3.012 1.00 7.90 C ATOM 50 C1' DT A 3 11.258 17.540 4.429 1.00 8.30 C ATOM 51 N1 DT A 3 10.458 16.247 4.429 1.00 7.50 N ATOM 52 C2 DT A 3 11.260 15.145 4.226 1.00 7.70 C ATOM 53 O2 DT A 3 12.438 15.166 4.073 1.00 8.00 O ATOM 54 N3 DT A 3 10.605 13.928 4.150 1.00 8.00 N ATOM 55 C4 DT A 3 9.218 13.830 4.298 1.00 7.80 C ATOM 56 O4 DT A 3 8.686 12.680 4.208 1.00 8.00 O ATOM 57 C5 DT A 3 8.419 14.993 4.527 1.00 7.30 C ATOM 58 C7 DT A 3 6.933 14.911 4.689 1.00 7.80 C ATOM 59 C6 DT A 3 9.088 16.183 4.532 1.00 7.40 C ATOM 60 P DA A 4 13.792 21.112 3.637 1.00 13.60 P ATOM 61 OP1 DA A 4 13.339 21.846 2.500 1.00 15.10 O ATOM 62 OP2 DA A 4 15.134 20.768 4.033 1.00 14.80 O ATOM 63 O5' DA A 4 13.155 22.043 4.874 1.00 12.10 O ATOM 64 C5' DA A 4 13.535 21.593 6.204 1.00 10.40 C ATOM 65 C4' DA A 4 12.648 22.597 7.059 1.00 8.30 C ATOM 66 O4' DA A 4 11.267 22.336 6.811 1.00 8.50 O ATOM 67 C3' DA A 4 12.779 22.247 8.574 1.00 7.40 C ATOM 68 O3' DA A 4 13.794 23.230 8.920 1.00 9.30 O ATOM 69 C2' DA A 4 11.484 22.515 9.095 1.00 7.40 C ATOM 70 C1' DA A 4 10.413 22.378 7.985 1.00 7.30 C ATOM 71 N9 DA A 4 9.607 21.176 7.994 1.00 6.70 N ATOM 72 C8 DA A 4 8.321 21.176 7.783 1.00 6.60 C ATOM 73 N7 DA A 4 7.762 19.968 7.774 1.00 7.20 N ATOM 74 C5 DA A 4 8.830 19.140 7.953 1.00 6.40 C ATOM 75 C6 DA A 4 8.935 17.729 7.958 1.00 6.50 C ATOM 76 N6 DA A 4 7.895 16.889 7.832 1.00 6.80 N ATOM 77 N1 DA A 4 10.185 17.214 8.106 1.00 6.50 N ATOM 78 C2 DA A 4 11.230 18.027 8.165 1.00 7.10 C ATOM 79 N3 DA A 4 11.221 19.360 8.165 1.00 6.10 N ATOM 80 C4 DA A 4 9.978 19.822 8.048 1.00 6.50 C HETATM 81 N1 5CM A 5 12.302 18.434 11.811 1.00 5.60 N HETATM 82 C2 5CM A 5 11.749 17.129 11.663 1.00 5.50 C HETATM 83 N3 5CM A 5 10.424 17.032 11.501 1.00 5.10 N HETATM 84 C4 5CM A 5 9.596 18.142 11.487 1.00 5.00 C HETATM 85 C5 5CM A 5 10.155 19.436 11.681 1.00 4.20 C HETATM 86 C5A 5CM A 5 9.292 20.647 11.726 1.00 5.20 C HETATM 87 C6 5CM A 5 11.498 19.560 11.815 1.00 4.50 C HETATM 88 O2 5CM A 5 12.528 16.171 11.658 1.00 6.20 O HETATM 89 N4 5CM A 5 8.280 17.908 11.379 1.00 5.00 N HETATM 90 C1' 5CM A 5 13.785 18.486 11.937 1.00 5.30 C HETATM 91 C2' 5CM A 5 14.430 18.584 10.534 1.00 6.30 C HETATM 92 C3' 5CM A 5 15.732 19.283 10.925 1.00 7.40 C HETATM 93 C4' 5CM A 5 15.413 20.102 12.211 1.00 6.90 C HETATM 94 O4' 5CM A 5 14.101 19.743 12.548 1.00 5.40 O HETATM 95 O3' 5CM A 5 16.595 18.200 11.420 1.00 8.90 O HETATM 96 C5' 5CM A 5 15.419 21.617 11.995 1.00 7.10 C HETATM 97 O5' 5CM A 5 14.769 21.794 10.714 1.00 9.00 O HETATM 98 P 5CM A 5 14.416 23.355 10.381 1.00 12.20 P HETATM 99 OP1 5CM A 5 13.345 23.693 11.307 1.00 14.20 O HETATM 100 OP2 5CM A 5 15.582 24.101 10.215 1.00 13.80 O ATOM 101 P DG A 6 18.166 18.252 11.388 1.00 10.00 P ATOM 102 OP1 DG A 6 18.549 18.809 10.156 1.00 9.50 O ATOM 103 OP2 DG A 6 18.553 16.965 11.968 1.00 10.60 O ATOM 104 O5' DG A 6 18.687 19.414 12.499 1.00 7.20 O ATOM 105 C5' DG A 6 18.766 19.058 13.794 1.00 6.30 C ATOM 106 C4' DG A 6 19.226 20.279 14.509 1.00 6.50 C ATOM 107 O4' DG A 6 18.257 21.286 14.396 1.00 5.90 O ATOM 108 C3' DG A 6 19.491 20.099 16.051 1.00 6.90 C ATOM 109 O3' DG A 6 20.564 20.972 16.478 1.00 8.60 O ATOM 110 C2' DG A 6 18.275 20.632 16.748 1.00 6.80 C ATOM 111 C1' DG A 6 17.760 21.663 15.691 1.00 6.10 C ATOM 112 N9 DG A 6 16.336 21.812 15.660 1.00 6.60 N ATOM 113 C8 DG A 6 15.650 22.972 15.678 1.00 5.20 C ATOM 114 N7 DG A 6 14.380 22.804 15.579 1.00 6.20 N ATOM 115 C5 DG A 6 14.221 21.401 15.538 1.00 5.60 C ATOM 116 C6 DG A 6 13.053 20.552 15.543 1.00 6.20 C ATOM 117 O6 DG A 6 11.878 20.991 15.430 1.00 6.40 O ATOM 118 N1 DG A 6 13.287 19.229 15.475 1.00 5.00 N ATOM 119 C2 DG A 6 14.561 18.766 15.480 1.00 4.90 C ATOM 120 N2 DG A 6 14.675 17.467 15.453 1.00 5.90 N ATOM 121 N3 DG A 6 15.677 19.451 15.552 1.00 4.60 N ATOM 122 C4 DG A 6 15.412 20.787 15.592 1.00 5.90 C TER 123 DG A 6 HETATM 124 N1 5CM B 7 10.078 15.328 14.783 1.00 5.20 N HETATM 125 C2 5CM B 7 11.160 16.149 14.967 1.00 5.40 C HETATM 126 N3 5CM B 7 10.929 17.531 15.053 1.00 5.50 N HETATM 127 C4 5CM B 7 9.711 18.057 15.003 1.00 4.50 C HETATM 128 C5 5CM B 7 8.584 17.190 14.819 1.00 5.00 C HETATM 129 C5A 5CM B 7 7.182 17.768 14.688 1.00 5.80 C HETATM 130 C6 5CM B 7 8.830 15.860 14.738 1.00 5.50 C HETATM 131 O2 5CM B 7 12.317 15.766 15.071 1.00 5.10 O HETATM 132 N4 5CM B 7 9.584 19.384 15.075 1.00 4.30 N HETATM 133 C1' 5CM B 7 10.377 13.858 14.765 1.00 6.60 C HETATM 134 C2' 5CM B 7 10.144 13.328 16.190 1.00 6.60 C HETATM 135 C3' 5CM B 7 9.908 11.849 15.803 1.00 7.30 C HETATM 136 C4' 5CM B 7 9.131 11.977 14.486 1.00 7.10 C HETATM 137 O4' 5CM B 7 9.365 13.322 14.005 1.00 6.80 O HETATM 138 O3' 5CM B 7 11.104 11.244 15.520 1.00 8.70 O HETATM 139 C5' 5CM B 7 7.612 11.956 14.500 1.00 10.40 C HETATM 140 O5' 5CM B 7 7.014 12.613 15.606 1.00 12.90 O ATOM 141 P DG B 8 11.432 9.646 15.772 1.00 10.10 P ATOM 142 OP1 DG B 8 10.615 9.260 16.797 1.00 10.40 O ATOM 143 OP2 DG B 8 12.831 9.537 15.655 1.00 21.10 O ATOM 144 O5' DG B 8 10.710 8.977 14.450 1.00 7.60 O ATOM 145 C5' DG B 8 11.308 9.309 13.232 1.00 7.40 C ATOM 146 C4' DG B 8 10.486 8.624 12.157 1.00 6.50 C ATOM 147 O4' DG B 8 9.168 9.120 12.144 1.00 6.20 O ATOM 148 C3' DG B 8 10.986 8.883 10.736 1.00 5.70 C ATOM 149 O3' DG B 8 11.747 7.723 10.282 1.00 7.00 O ATOM 150 C2' DG B 8 9.795 9.080 9.851 1.00 5.50 C ATOM 151 C1' DG B 8 8.627 9.299 10.844 1.00 5.80 C ATOM 152 N9 DG B 8 8.024 10.611 10.844 1.00 6.10 N ATOM 153 C8 DG B 8 6.727 10.921 10.835 1.00 7.30 C ATOM 154 N7 DG B 8 6.462 12.233 10.916 1.00 7.20 N ATOM 155 C5 DG B 8 7.762 12.741 10.934 1.00 6.40 C ATOM 156 C6 DG B 8 8.231 14.098 11.047 1.00 6.30 C ATOM 157 O6 DG B 8 7.519 15.124 11.146 1.00 6.70 O ATOM 158 N1 DG B 8 9.559 14.314 11.042 1.00 5.40 N ATOM 159 C2 DG B 8 10.381 13.258 11.110 1.00 6.20 C ATOM 160 N2 DG B 8 11.618 13.505 11.173 1.00 5.80 N ATOM 161 N3 DG B 8 10.083 11.956 10.984 1.00 5.00 N ATOM 162 C4 DG B 8 8.751 11.816 10.921 1.00 6.10 C ATOM 163 P DT B 9 13.284 7.912 9.878 1.00 7.40 P ATOM 164 OP1 DT B 9 13.744 6.585 9.558 1.00 8.40 O ATOM 165 OP2 DT B 9 14.022 8.612 10.826 1.00 9.90 O ATOM 166 O5' DT B 9 13.243 8.743 8.506 1.00 7.60 O ATOM 167 C5' DT B 9 14.058 8.642 7.427 1.00 6.90 C ATOM 168 C4' DT B 9 14.593 10.118 7.135 1.00 5.50 C ATOM 169 O4' DT B 9 13.545 10.927 6.654 1.00 6.50 O ATOM 170 C3' DT B 9 15.202 10.918 8.336 1.00 7.10 C ATOM 171 O3' DT B 9 16.268 11.709 7.904 1.00 6.90 O ATOM 172 C2' DT B 9 14.007 11.828 8.754 1.00 5.80 C ATOM 173 C1' DT B 9 13.470 12.148 7.315 1.00 5.90 C ATOM 174 N1 DT B 9 12.016 12.580 7.373 1.00 5.40 N ATOM 175 C2 DT B 9 11.803 13.888 7.625 1.00 5.90 C ATOM 176 O2 DT B 9 12.766 14.643 7.702 1.00 7.50 O ATOM 177 N3 DT B 9 10.529 14.363 7.711 1.00 6.00 N ATOM 178 C4 DT B 9 9.422 13.526 7.634 1.00 5.90 C ATOM 179 O4 DT B 9 8.334 14.083 7.756 1.00 6.10 O ATOM 180 C5 DT B 9 9.682 12.093 7.409 1.00 5.50 C ATOM 181 C7 DT B 9 8.522 11.128 7.266 1.00 6.40 C ATOM 182 C6 DT B 9 10.902 11.716 7.288 1.00 5.40 C ATOM 183 P DA B 10 17.760 11.216 7.886 1.00 7.10 P ATOM 184 OP1 DA B 10 18.082 10.471 9.037 1.00 7.70 O ATOM 185 OP2 DA B 10 18.551 12.437 7.585 1.00 8.50 O ATOM 186 O5' DA B 10 17.946 10.224 6.623 1.00 7.30 O ATOM 187 C5' DA B 10 17.894 10.800 5.269 1.00 8.40 C ATOM 188 C4' DA B 10 17.856 9.512 4.429 1.00 9.80 C ATOM 189 O4' DA B 10 16.744 8.782 4.635 1.00 10.40 O ATOM 190 C3' DA B 10 17.770 9.905 2.913 1.00 11.70 C ATOM 191 O3' DA B 10 19.112 9.625 2.468 1.00 13.50 O ATOM 192 C2' DA B 10 16.671 9.035 2.351 1.00 11.30 C ATOM 193 C1' DA B 10 15.994 8.298 3.516 1.00 10.00 C ATOM 194 N9 DA B 10 14.606 8.530 3.669 1.00 8.70 N ATOM 195 C8 DA B 10 13.630 7.659 3.858 1.00 9.30 C ATOM 196 N7 DA B 10 12.390 8.037 4.019 1.00 8.60 N ATOM 197 C5 DA B 10 12.607 9.388 3.844 1.00 8.00 C ATOM 198 C6 DA B 10 11.641 10.425 3.907 1.00 7.40 C ATOM 199 N6 DA B 10 10.316 10.243 4.132 1.00 8.20 N ATOM 200 N1 DA B 10 12.143 11.688 3.763 1.00 7.30 N ATOM 201 C2 DA B 10 13.422 11.865 3.579 1.00 7.30 C ATOM 202 N3 DA B 10 14.477 10.964 3.489 1.00 7.90 N ATOM 203 C4 DA B 10 13.907 9.738 3.696 1.00 8.10 C HETATM 204 N1 5CM B 11 14.948 12.266 -0.306 1.00 6.60 N HETATM 205 C2 5CM B 11 13.757 12.860 -0.049 1.00 5.70 C HETATM 206 N3 5CM B 11 12.696 12.047 0.157 1.00 6.40 N HETATM 207 C4 5CM B 11 12.773 10.635 0.148 1.00 6.10 C HETATM 208 C5 5CM B 11 14.065 10.063 -0.126 1.00 5.40 C HETATM 209 C5A 5CM B 11 14.221 8.551 -0.162 1.00 6.90 C HETATM 210 C6 5CM B 11 15.077 10.864 -0.360 1.00 5.70 C HETATM 211 O2 5CM B 11 13.637 14.062 -0.009 1.00 6.70 O HETATM 212 N4 5CM B 11 11.697 9.911 0.427 1.00 6.00 N HETATM 213 C1' 5CM B 11 16.089 13.188 -0.517 1.00 7.80 C HETATM 214 C2' 5CM B 11 16.637 13.611 0.908 1.00 9.80 C HETATM 215 C3' 5CM B 11 18.071 14.037 0.477 1.00 11.00 C HETATM 216 C4' 5CM B 11 18.449 13.143 -0.728 1.00 10.30 C HETATM 217 O4' 5CM B 11 17.194 12.534 -1.151 1.00 9.80 O HETATM 218 O3' 5CM B 11 18.114 15.364 -0.022 1.00 13.00 O HETATM 219 C5' 5CM B 11 19.576 12.056 -0.580 1.00 10.90 C HETATM 220 O5' 5CM B 11 19.040 11.280 0.441 1.00 13.20 O HETATM 221 P 5CM B 11 19.936 10.660 1.708 1.00 13.50 P HETATM 222 OP1 5CM B 11 20.960 9.938 0.940 1.00 15.30 O HETATM 223 OP2 5CM B 11 20.202 11.825 2.572 1.00 14.90 O ATOM 224 P DG B 12 19.316 16.368 0.184 1.00 15.50 P ATOM 225 OP1 DG B 12 19.765 16.225 1.511 1.00 15.70 O ATOM 226 OP2 DG B 12 18.786 17.655 -0.373 1.00 17.00 O ATOM 227 O5' DG B 12 20.593 15.927 -0.742 1.00 15.10 O ATOM 228 C5' DG B 12 20.287 16.134 -2.127 1.00 14.20 C ATOM 229 C4' DG B 12 21.490 15.568 -2.859 1.00 12.60 C ATOM 230 O4' DG B 12 21.449 14.113 -2.832 1.00 10.70 O ATOM 231 C3' DG B 12 21.569 16.052 -4.343 1.00 13.60 C ATOM 232 O3' DG B 12 23.054 16.015 -4.626 1.00 16.50 O ATOM 233 C2' DG B 12 20.894 14.929 -4.968 1.00 10.90 C ATOM 234 C1' DG B 12 21.374 13.700 -4.258 1.00 10.50 C ATOM 235 N9 DG B 12 20.482 12.562 -4.226 1.00 10.40 N ATOM 236 C8 DG B 12 20.794 11.256 -4.186 1.00 9.30 C ATOM 237 N7 DG B 12 19.733 10.471 -4.105 1.00 9.90 N ATOM 238 C5 DG B 12 18.678 11.326 -4.055 1.00 8.90 C ATOM 239 C6 DG B 12 17.285 11.110 -4.006 1.00 8.70 C ATOM 240 O6 DG B 12 16.705 9.954 -3.956 1.00 8.10 O ATOM 241 N1 DG B 12 16.441 12.190 -4.006 1.00 7.30 N ATOM 242 C2 DG B 12 16.997 13.432 -4.064 1.00 7.90 C ATOM 243 N2 DG B 12 16.196 14.387 -3.979 1.00 7.30 N ATOM 244 N3 DG B 12 18.299 13.748 -4.109 1.00 8.20 N ATOM 245 C4 DG B 12 19.081 12.628 -4.136 1.00 9.00 C TER 246 DG B 12 CONECT 1 2 7 10 CONECT 2 1 3 8 CONECT 3 2 4 CONECT 4 3 5 9 CONECT 5 4 6 7 CONECT 6 5 CONECT 7 1 5 CONECT 8 2 CONECT 9 4 CONECT 10 1 11 14 CONECT 11 10 12 CONECT 12 11 13 15 CONECT 13 12 14 16 CONECT 14 10 13 CONECT 15 12 18 CONECT 16 13 17 CONECT 17 16 CONECT 18 15 CONECT 68 98 CONECT 81 82 87 90 CONECT 82 81 83 88 CONECT 83 82 84 CONECT 84 83 85 89 CONECT 85 84 86 87 CONECT 86 85 CONECT 87 81 85 CONECT 88 82 CONECT 89 84 CONECT 90 81 91 94 CONECT 91 90 92 CONECT 92 91 93 95 CONECT 93 92 94 96 CONECT 94 90 93 CONECT 95 92 101 CONECT 96 93 97 CONECT 97 96 98 CONECT 98 68 97 99 100 CONECT 99 98 CONECT 100 98 CONECT 101 95 CONECT 124 125 130 133 CONECT 125 124 126 131 CONECT 126 125 127 CONECT 127 126 128 132 CONECT 128 127 129 130 CONECT 129 128 CONECT 130 124 128 CONECT 131 125 CONECT 132 127 CONECT 133 124 134 137 CONECT 134 133 135 CONECT 135 134 136 138 CONECT 136 135 137 139 CONECT 137 133 136 CONECT 138 135 141 CONECT 139 136 140 CONECT 140 139 CONECT 141 138 CONECT 191 221 CONECT 204 205 210 213 CONECT 205 204 206 211 CONECT 206 205 207 CONECT 207 206 208 212 CONECT 208 207 209 210 CONECT 209 208 CONECT 210 204 208 CONECT 211 205 CONECT 212 207 CONECT 213 204 214 217 CONECT 214 213 215 CONECT 215 214 216 218 CONECT 216 215 217 219 CONECT 217 213 216 CONECT 218 215 224 CONECT 219 216 220 CONECT 220 219 221 CONECT 221 191 220 222 223 CONECT 222 221 CONECT 223 221 CONECT 224 218 MASTER 303 0 4 0 0 0 0 6 244 2 80 2 END