HEADER DNA 22-JAN-98 376D TITLE A ZIPPER-LIKE DNA DUPLEX D(GCGAAAGCT) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*GP*(CBR)P*GP*AP*AP*AP*GP*CP*T)-3'); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1 KEYWDS RIGHT HANDED DNA, DOUBLE HELIX, OVERHANGING BASE, MODIFIED, KEYWDS 2 MISMATCHED, DNA EXPDTA X-RAY DIFFRACTION AUTHOR W.B.T.CRUSE,W.SHEPARD,T.PRANGE,E.DELALFORTELLE,R.FOURME REVDAT 6 03-APR-24 376D 1 REMARK REVDAT 5 21-FEB-24 376D 1 REMARK LINK REVDAT 4 24-FEB-09 376D 1 VERSN REVDAT 3 01-APR-03 376D 1 JRNL REVDAT 2 15-NOV-99 376D 3 HETATM MODRES HETNAM REVDAT 1 26-OCT-99 376D 0 JRNL AUTH W.SHEPARD,W.B.CRUSE,R.FOURME,E.DE LA FORTELLE,T.PRANGE JRNL TITL A ZIPPER-LIKE DUPLEX IN DNA: THE CRYSTAL STRUCTURE OF JRNL TITL 2 D(GCGAAAGCT) AT 2.1 A RESOLUTION. JRNL REF STRUCTURE V. 6 849 1998 JRNL REFN ISSN 0969-2126 JRNL PMID 9687367 JRNL DOI 10.1016/S0969-2126(98)00087-2 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.H.CATE,A.R.GOODING,E.PODELL,K.ZHOU,B.L.GOLDEN, REMARK 1 AUTH 2 A.A.SZEWCZAK,C.E.KUNDROT,T.R.CECH,J.A.DOUDNA REMARK 1 TITL RNA TERTIARY STRUCTURE MEDIATION BY ADENOSINE PLATFORMS REMARK 1 REF SCIENCE V. 273 1696 1997 REMARK 1 REFN ISSN 0036-8075 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.S.KIEFT,I.TINOCO JR. REMARK 1 TITL SOLUTION STRUCTURE OF A METAL-BINDING SITE IN THE MAJOR REMARK 1 TITL 2 GROOVE OF RNA COMPLEXED WITH COBALT(III) HEXAMMINE REMARK 1 REF STRUCTURE V. 5 713 1997 REMARK 1 REFN ISSN 0969-2126 REMARK 1 REFERENCE 3 REMARK 1 AUTH I.HIRAO,Y.NICHIMURA,T.NARAOKA,K.WATANABE,Y.ARATA,K.MIURA REMARK 1 TITL EXTRAORDINARY STABLE STRUCTURE OF SHORT SINGLE-STRANDED DNA REMARK 1 TITL 2 FRAGMENTS CONTAINING A SPECIFIC BASE SEQUENCE: D(GCGAAAGC) REMARK 1 REF NUCLEIC ACIDS RES. V. 17 2223 1989 REMARK 1 REFN ISSN 0305-1048 REMARK 1 REFERENCE 4 REMARK 1 AUTH R.V.GEISSNER,G.J.QUIGLEY,H.J.WANG,A.VAN DER MAREL, REMARK 1 AUTH 2 J.H.VAN BOOM REMARK 1 TITL STRUCTURAL BASIS FOR STABILISATION OF Z-DNA BY COBALT REMARK 1 TITL 2 HAXAAMMINE AND MAGNESIUM CATIONS REMARK 1 REF BIOCHEMISTRY V. 24 237 1985 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 1832 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 183 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 185 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 18 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.15 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : 15.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 2.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 376D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000178844. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-SEP-96 REMARK 200 TEMPERATURE (KELVIN) : 276.00 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LURE REMARK 200 BEAMLINE : DW21B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : SI(III) REMARK 200 OPTICS : DOUBLE MONO + MULTILAYER FOCUS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1832 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 61.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.14800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD AT BROMINE EDGE REMARK 200 SOFTWARE USED: MADLSQ, CCP4 REMARK 200 STARTING MODEL: MANUALLY BUILT IN THE EXPERIMENTAL DENSITY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CACODYLATE, [CO(NH3)6]3+, MPD REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.69500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.69500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.69500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 32.69500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 32.69500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 32.69500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 18.78000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 32.52791 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 32.69500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CO NCO A 10 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT A 9 C4 DT A 9 O4 0.108 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG A 1 O4' - C1' - N9 ANGL. DEV. = 3.7 DEGREES REMARK 500 DG A 1 C6 - N1 - C2 ANGL. DEV. = -4.2 DEGREES REMARK 500 DG A 1 N1 - C2 - N3 ANGL. DEV. = 4.1 DEGREES REMARK 500 DG A 1 N9 - C4 - C5 ANGL. DEV. = 2.6 DEGREES REMARK 500 DG A 1 N1 - C6 - O6 ANGL. DEV. = -4.7 DEGREES REMARK 500 DG A 1 C3' - O3' - P ANGL. DEV. = 9.9 DEGREES REMARK 500 DG A 3 C3' - C2' - C1' ANGL. DEV. = -7.8 DEGREES REMARK 500 DG A 3 O4' - C1' - N9 ANGL. DEV. = 8.8 DEGREES REMARK 500 DG A 3 C5 - C6 - O6 ANGL. DEV. = -5.0 DEGREES REMARK 500 DA A 4 N1 - C2 - N3 ANGL. DEV. = -3.7 DEGREES REMARK 500 DA A 5 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DA A 5 N1 - C2 - N3 ANGL. DEV. = -3.1 DEGREES REMARK 500 DA A 6 N1 - C2 - N3 ANGL. DEV. = -4.4 DEGREES REMARK 500 DG A 7 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC A 8 O4' - C1' - N1 ANGL. DEV. = 5.7 DEGREES REMARK 500 DT A 9 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DT A 9 C2 - N3 - C4 ANGL. DEV. = -5.0 DEGREES REMARK 500 DT A 9 N3 - C4 - C5 ANGL. DEV. = 4.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NCO A 10 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO A 10 DBREF 376D A 1 9 PDB 376D 376D 1 9 SEQRES 1 A 9 DG CBR DG DA DA DA DG DC DT MODRES 376D CBR A 2 DC HET CBR A 2 20 HET NCO A 10 3 HETNAM CBR 5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE HETNAM NCO COBALT HEXAMMINE(III) FORMUL 1 CBR C9 H13 BR N3 O7 P FORMUL 2 NCO CO H18 N6 3+ FORMUL 3 HOH *18(H2 O) LINK O3' DG A 1 P CBR A 2 1555 1555 1.60 LINK O3' CBR A 2 P DG A 3 1555 1555 1.61 SITE 1 AC1 4 CBR A 2 DG A 3 HOH A 14 HOH A 23 CRYST1 37.560 37.560 65.390 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026624 0.015370 0.000000 0.00000 SCALE2 0.000000 0.030742 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015293 0.00000 ATOM 1 O5' DG A 1 14.271 8.963 36.082 1.00 62.65 O ATOM 2 C5' DG A 1 14.602 9.590 34.812 1.00 39.76 C ATOM 3 C4' DG A 1 14.119 8.646 33.736 1.00 44.29 C ATOM 4 O4' DG A 1 12.842 9.029 33.272 1.00 29.48 O ATOM 5 C3' DG A 1 15.015 8.550 32.494 1.00 28.50 C ATOM 6 O3' DG A 1 15.135 7.198 32.067 1.00 38.66 O ATOM 7 C2' DG A 1 14.377 9.541 31.524 1.00 24.66 C ATOM 8 C1' DG A 1 12.921 9.569 31.940 1.00 19.22 C ATOM 9 N9 DG A 1 12.322 10.911 31.853 1.00 15.81 N ATOM 10 C8 DG A 1 12.865 12.162 31.942 1.00 17.92 C ATOM 11 N7 DG A 1 11.993 13.139 31.821 1.00 20.52 N ATOM 12 C5 DG A 1 10.768 12.490 31.632 1.00 17.35 C ATOM 13 C6 DG A 1 9.439 12.993 31.385 1.00 12.35 C ATOM 14 O6 DG A 1 9.001 14.142 31.317 1.00 15.07 O ATOM 15 N1 DG A 1 8.496 11.992 31.217 1.00 15.07 N ATOM 16 C2 DG A 1 8.860 10.664 31.258 1.00 10.04 C ATOM 17 N2 DG A 1 7.864 9.781 31.104 1.00 14.62 N ATOM 18 N3 DG A 1 10.074 10.153 31.456 1.00 11.56 N ATOM 19 C4 DG A 1 10.978 11.135 31.629 1.00 13.01 C HETATM 20 BR CBR A 2 14.475 12.479 28.883 1.00 19.56 BR HETATM 21 P CBR A 2 15.812 6.601 30.744 1.00 29.71 P HETATM 22 OP1 CBR A 2 16.215 5.221 31.165 1.00 26.34 O HETATM 23 OP2 CBR A 2 16.978 7.391 30.271 1.00 25.16 O HETATM 24 O5' CBR A 2 14.613 6.551 29.693 1.00 26.05 O HETATM 25 N1 CBR A 2 11.674 9.529 28.208 1.00 17.68 N HETATM 26 C6 CBR A 2 12.818 10.242 28.435 1.00 17.89 C HETATM 27 C2 CBR A 2 10.449 10.183 28.058 1.00 15.22 C HETATM 28 O2 CBR A 2 9.419 9.527 27.867 1.00 13.69 O HETATM 29 N3 CBR A 2 10.426 11.547 28.156 1.00 12.44 N HETATM 30 C4 CBR A 2 11.589 12.233 28.395 1.00 10.25 C HETATM 31 N4 CBR A 2 11.433 13.565 28.435 1.00 12.22 N HETATM 32 C5 CBR A 2 12.852 11.584 28.540 1.00 15.23 C HETATM 33 C2' CBR A 2 12.593 7.493 27.114 1.00 38.78 C HETATM 34 C5' CBR A 2 13.445 5.780 30.098 1.00 28.18 C HETATM 35 C4' CBR A 2 12.362 6.123 29.101 1.00 26.15 C HETATM 36 O4' CBR A 2 11.831 7.398 29.344 1.00 19.77 O HETATM 37 C1' CBR A 2 11.585 8.066 28.090 1.00 25.79 C HETATM 38 C3' CBR A 2 12.871 6.098 27.657 1.00 25.74 C HETATM 39 O3' CBR A 2 12.253 5.027 26.945 1.00 25.19 O ATOM 40 P DG A 3 12.596 4.681 25.408 1.00 30.02 P ATOM 41 OP1 DG A 3 12.113 3.290 25.279 1.00 35.71 O ATOM 42 OP2 DG A 3 14.064 4.836 25.165 1.00 27.51 O ATOM 43 O5' DG A 3 11.796 5.761 24.561 1.00 21.25 O ATOM 44 C5' DG A 3 10.357 5.865 24.632 1.00 21.24 C ATOM 45 C4' DG A 3 9.995 7.189 24.011 1.00 29.95 C ATOM 46 O4' DG A 3 10.701 8.226 24.667 1.00 18.46 O ATOM 47 C3' DG A 3 10.367 7.340 22.531 1.00 25.40 C ATOM 48 O3' DG A 3 9.475 8.237 21.872 1.00 36.38 O ATOM 49 C2' DG A 3 11.761 7.996 22.599 1.00 21.40 C ATOM 50 C1' DG A 3 11.360 9.025 23.666 1.00 13.64 C ATOM 51 N9 DG A 3 12.541 9.770 24.082 1.00 15.90 N ATOM 52 C8 DG A 3 13.829 9.306 24.215 1.00 13.73 C ATOM 53 N7 DG A 3 14.667 10.234 24.611 1.00 16.35 N ATOM 54 C5 DG A 3 13.867 11.362 24.755 1.00 14.34 C ATOM 55 C6 DG A 3 14.206 12.700 25.154 1.00 16.96 C ATOM 56 O6 DG A 3 15.337 13.050 25.456 1.00 16.03 O ATOM 57 N1 DG A 3 13.139 13.572 25.170 1.00 14.85 N ATOM 58 C2 DG A 3 11.854 13.170 24.851 1.00 8.38 C ATOM 59 N2 DG A 3 10.906 14.117 24.904 1.00 10.59 N ATOM 60 N3 DG A 3 11.498 11.934 24.498 1.00 10.13 N ATOM 61 C4 DG A 3 12.559 11.101 24.434 1.00 10.46 C ATOM 62 P DA A 4 9.016 7.978 20.352 1.00 32.63 P ATOM 63 OP1 DA A 4 7.923 6.974 20.514 1.00 35.35 O ATOM 64 OP2 DA A 4 10.164 7.466 19.550 1.00 33.84 O ATOM 65 O5' DA A 4 8.487 9.398 19.872 1.00 33.33 O ATOM 66 C5' DA A 4 7.341 9.992 20.540 1.00 34.98 C ATOM 67 C4' DA A 4 7.706 11.451 20.750 1.00 28.09 C ATOM 68 O4' DA A 4 8.821 11.533 21.613 1.00 24.66 O ATOM 69 C3' DA A 4 8.160 12.162 19.480 1.00 34.84 C ATOM 70 O3' DA A 4 7.075 12.755 18.764 1.00 43.56 O ATOM 71 C2' DA A 4 9.151 13.216 19.947 1.00 28.48 C ATOM 72 C1' DA A 4 9.578 12.721 21.310 1.00 31.93 C ATOM 73 N9 DA A 4 11.010 12.377 21.265 1.00 12.76 N ATOM 74 C8 DA A 4 11.543 11.145 20.994 1.00 17.42 C ATOM 75 N7 DA A 4 12.853 11.127 21.022 1.00 13.32 N ATOM 76 C5 DA A 4 13.181 12.446 21.325 1.00 15.77 C ATOM 77 C6 DA A 4 14.433 13.096 21.499 1.00 11.50 C ATOM 78 N6 DA A 4 15.618 12.486 21.396 1.00 12.30 N ATOM 79 N1 DA A 4 14.385 14.418 21.803 1.00 14.83 N ATOM 80 C2 DA A 4 13.178 15.086 21.911 1.00 10.35 C ATOM 81 N3 DA A 4 11.978 14.542 21.754 1.00 15.83 N ATOM 82 C4 DA A 4 12.064 13.225 21.477 1.00 9.41 C ATOM 83 P DA A 5 6.724 12.253 17.274 1.00 29.12 P ATOM 84 OP1 DA A 5 5.318 12.725 17.143 1.00 31.15 O ATOM 85 OP2 DA A 5 6.850 10.770 17.152 1.00 33.21 O ATOM 86 O5' DA A 5 7.794 13.012 16.361 1.00 34.55 O ATOM 87 C5' DA A 5 7.594 14.420 16.087 1.00 30.30 C ATOM 88 C4' DA A 5 8.707 14.922 15.209 1.00 37.52 C ATOM 89 O4' DA A 5 9.935 14.263 15.446 1.00 31.38 O ATOM 90 C3' DA A 5 8.461 14.846 13.702 1.00 31.22 C ATOM 91 O3' DA A 5 8.470 16.143 13.102 1.00 37.28 O ATOM 92 C2' DA A 5 9.604 13.977 13.166 1.00 30.70 C ATOM 93 C1' DA A 5 10.682 14.282 14.199 1.00 35.84 C ATOM 94 N9 DA A 5 11.728 13.253 14.182 1.00 20.33 N ATOM 95 C8 DA A 5 11.572 11.901 13.988 1.00 19.32 C ATOM 96 N7 DA A 5 12.698 11.228 14.025 1.00 15.73 N ATOM 97 C5 DA A 5 13.655 12.213 14.260 1.00 16.96 C ATOM 98 C6 DA A 5 15.065 12.148 14.405 1.00 18.02 C ATOM 99 N6 DA A 5 15.795 11.024 14.356 1.00 19.56 N ATOM 100 N1 DA A 5 15.718 13.319 14.639 1.00 19.61 N ATOM 101 C2 DA A 5 15.007 14.501 14.717 1.00 21.30 C ATOM 102 N3 DA A 5 13.693 14.636 14.579 1.00 19.94 N ATOM 103 C4 DA A 5 13.076 13.458 14.360 1.00 20.01 C ATOM 104 P DA A 6 7.371 16.665 12.056 1.00 31.06 P ATOM 105 OP1 DA A 6 6.065 16.389 12.696 1.00 37.07 O ATOM 106 OP2 DA A 6 7.511 15.934 10.749 1.00 47.48 O ATOM 107 O5' DA A 6 7.741 18.196 11.870 1.00 33.14 O ATOM 108 C5' DA A 6 7.750 19.142 12.962 1.00 38.03 C ATOM 109 C4' DA A 6 7.748 20.501 12.295 1.00 31.24 C ATOM 110 O4' DA A 6 8.941 20.742 11.579 1.00 38.30 O ATOM 111 C3' DA A 6 6.642 20.668 11.248 1.00 29.16 C ATOM 112 O3' DA A 6 6.205 22.025 11.169 1.00 31.11 O ATOM 113 C2' DA A 6 7.330 20.195 9.954 1.00 21.62 C ATOM 114 C1' DA A 6 8.667 20.868 10.149 1.00 20.12 C ATOM 115 N9 DA A 6 9.740 20.138 9.453 1.00 15.61 N ATOM 116 C8 DA A 6 9.816 18.861 8.994 1.00 18.18 C ATOM 117 N7 DA A 6 10.970 18.580 8.424 1.00 15.80 N ATOM 118 C5 DA A 6 11.673 19.774 8.496 1.00 12.42 C ATOM 119 C6 DA A 6 12.982 20.166 8.106 1.00 18.17 C ATOM 120 N6 DA A 6 13.863 19.399 7.448 1.00 17.38 N ATOM 121 N1 DA A 6 13.340 21.462 8.349 1.00 15.62 N ATOM 122 C2 DA A 6 12.470 22.336 8.977 1.00 16.39 C ATOM 123 N3 DA A 6 11.242 22.027 9.384 1.00 17.10 N ATOM 124 C4 DA A 6 10.931 20.741 9.135 1.00 13.37 C ATOM 125 P DG A 7 4.956 22.445 10.239 1.00 34.99 P ATOM 126 OP1 DG A 7 4.270 23.485 11.047 1.00 32.06 O ATOM 127 OP2 DG A 7 4.078 21.277 9.951 1.00 26.70 O ATOM 128 O5' DG A 7 5.698 22.989 8.931 1.00 35.33 O ATOM 129 C5' DG A 7 6.646 24.063 9.109 1.00 24.57 C ATOM 130 C4' DG A 7 7.430 24.209 7.829 1.00 33.01 C ATOM 131 O4' DG A 7 8.160 23.027 7.591 1.00 30.85 O ATOM 132 C3' DG A 7 6.622 24.483 6.567 1.00 39.31 C ATOM 133 O3' DG A 7 7.187 25.563 5.809 1.00 37.51 O ATOM 134 C2' DG A 7 6.664 23.166 5.782 1.00 32.91 C ATOM 135 C1' DG A 7 8.038 22.680 6.191 1.00 31.03 C ATOM 136 N9 DG A 7 8.221 21.240 5.996 1.00 17.09 N ATOM 137 C8 DG A 7 7.384 20.170 6.051 1.00 15.25 C ATOM 138 N7 DG A 7 7.955 19.011 5.825 1.00 17.34 N ATOM 139 C5 DG A 7 9.276 19.365 5.577 1.00 15.57 C ATOM 140 C6 DG A 7 10.408 18.561 5.212 1.00 14.22 C ATOM 141 O6 DG A 7 10.426 17.349 5.084 1.00 17.60 O ATOM 142 N1 DG A 7 11.549 19.297 5.040 1.00 14.10 N ATOM 143 C2 DG A 7 11.593 20.663 5.163 1.00 13.00 C ATOM 144 N2 DG A 7 12.793 21.212 4.962 1.00 18.10 N ATOM 145 N3 DG A 7 10.566 21.452 5.488 1.00 17.80 N ATOM 146 C4 DG A 7 9.456 20.719 5.662 1.00 18.71 C ATOM 147 P DC A 8 6.224 26.515 4.927 1.00 31.31 P ATOM 148 OP1 DC A 8 5.585 27.380 5.949 1.00 38.78 O ATOM 149 OP2 DC A 8 5.228 25.678 4.186 1.00 29.79 O ATOM 150 O5' DC A 8 7.245 27.259 3.961 1.00 39.66 O ATOM 151 C5' DC A 8 7.683 26.570 2.761 1.00 44.41 C ATOM 152 C4' DC A 8 9.197 26.531 2.809 1.00 44.74 C ATOM 153 O4' DC A 8 9.622 25.311 3.381 1.00 46.44 O ATOM 154 C3' DC A 8 9.851 26.594 1.431 1.00 46.39 C ATOM 155 O3' DC A 8 11.078 27.330 1.407 1.00 40.23 O ATOM 156 C2' DC A 8 10.032 25.126 1.044 1.00 49.75 C ATOM 157 C1' DC A 8 10.258 24.477 2.403 1.00 29.83 C ATOM 158 N1 DC A 8 9.736 23.100 2.358 1.00 20.94 N ATOM 159 C2 DC A 8 10.688 22.120 2.087 1.00 15.63 C ATOM 160 O2 DC A 8 11.853 22.448 1.904 1.00 14.41 O ATOM 161 N3 DC A 8 10.270 20.823 2.036 1.00 19.37 N ATOM 162 C4 DC A 8 8.972 20.479 2.230 1.00 16.80 C ATOM 163 N4 DC A 8 8.624 19.194 2.164 1.00 13.88 N ATOM 164 C5 DC A 8 8.009 21.490 2.503 1.00 15.56 C ATOM 165 C6 DC A 8 8.417 22.764 2.380 1.00 17.91 C ATOM 166 P DT A 9 11.138 28.815 0.780 1.00 58.00 P ATOM 167 OP1 DT A 9 12.393 28.799 -0.016 1.00 54.66 O ATOM 168 OP2 DT A 9 11.175 29.849 1.865 1.00 58.17 O ATOM 169 O5' DT A 9 9.803 28.918 -0.079 1.00 68.73 O ATOM 170 C5' DT A 9 9.316 30.213 -0.515 1.00 69.85 C ATOM 171 C4' DT A 9 8.378 30.712 0.563 1.00 73.54 C ATOM 172 O4' DT A 9 7.272 31.363 -0.022 1.00 74.12 O ATOM 173 C3' DT A 9 7.801 29.635 1.472 1.00 68.66 C ATOM 174 O3' DT A 9 7.761 30.027 2.848 1.00 68.05 O ATOM 175 C2' DT A 9 6.408 29.360 0.901 1.00 78.99 C ATOM 176 C1' DT A 9 6.037 30.726 0.354 1.00 79.50 C ATOM 177 N1 DT A 9 5.118 30.589 -0.793 1.00 78.10 N ATOM 178 C2 DT A 9 5.581 29.973 -1.943 1.00 79.01 C ATOM 179 O2 DT A 9 6.729 29.544 -2.027 1.00 73.28 O ATOM 180 N3 DT A 9 4.713 29.857 -2.995 1.00 67.48 N ATOM 181 C4 DT A 9 3.433 30.321 -2.936 1.00 72.96 C ATOM 182 O4 DT A 9 2.637 30.176 -3.999 1.00 77.03 O ATOM 183 C5 DT A 9 2.971 30.955 -1.753 1.00 61.07 C ATOM 184 C7 DT A 9 1.563 31.486 -1.632 1.00 65.63 C ATOM 185 C6 DT A 9 3.834 31.050 -0.732 1.00 80.29 C TER 186 DT A 9 HETATM 187 CO NCO A 10 18.780 10.843 25.743 0.33 13.07 CO HETATM 188 N1 NCO A 10 17.791 9.579 24.611 1.00 11.41 N HETATM 189 N2 NCO A 10 19.394 9.354 26.846 1.00 12.18 N HETATM 190 O HOH A 11 15.657 23.129 7.112 1.00 22.96 O HETATM 191 O HOH A 12 6.323 17.992 2.901 1.00 23.66 O HETATM 192 O HOH A 13 17.291 14.302 21.017 0.33 20.91 O HETATM 193 O HOH A 14 22.030 9.770 27.571 1.00 5.36 O HETATM 194 O HOH A 15 13.114 16.207 26.224 1.00 42.30 O HETATM 195 O HOH A 16 9.749 6.611 31.190 1.00 30.98 O HETATM 196 O HOH A 17 16.670 15.910 23.080 1.00 34.81 O HETATM 197 O HOH A 18 12.326 18.268 24.518 1.00 42.61 O HETATM 198 O HOH A 19 15.729 6.388 25.474 1.00 25.49 O HETATM 199 O HOH A 20 14.983 9.218 21.033 1.00 42.82 O HETATM 200 O HOH A 21 14.151 23.962 1.621 1.00 43.61 O HETATM 201 O HOH A 22 6.241 5.516 22.360 1.00 57.42 O HETATM 202 O HOH A 23 16.900 11.071 29.632 1.00 53.16 O HETATM 203 O HOH A 24 7.091 16.270 5.269 1.00 27.14 O HETATM 204 O HOH A 25 10.762 9.492 17.510 1.00 56.54 O HETATM 205 O HOH A 26 10.832 24.673 6.091 1.00 35.03 O HETATM 206 O HOH A 27 18.180 14.850 14.493 1.00 19.91 O HETATM 207 O HOH A 28 6.561 13.221 10.142 1.00 28.71 O CONECT 6 21 CONECT 20 32 CONECT 21 6 22 23 24 CONECT 22 21 CONECT 23 21 CONECT 24 21 34 CONECT 25 26 27 37 CONECT 26 25 32 CONECT 27 25 28 29 CONECT 28 27 CONECT 29 27 30 CONECT 30 29 31 32 CONECT 31 30 CONECT 32 20 26 30 CONECT 33 37 38 CONECT 34 24 35 CONECT 35 34 36 38 CONECT 36 35 37 CONECT 37 25 33 36 CONECT 38 33 35 39 CONECT 39 38 40 CONECT 40 39 CONECT 187 188 189 CONECT 188 187 CONECT 189 187 MASTER 334 0 2 0 0 0 1 6 206 1 25 1 END