HEADER DNA 06-MAY-09 3HCL TITLE HELICAL SUPERSTRUCTURES IN A DNA OLIGONUCLEOTIDE CRYSTAL COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*CP*GP*AP*TP*AP*T)-3'); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS DNA, OLIGONUCLEOTIDE, SUPERHELICES, SUPRAMOLECULAR CHEMISTRY EXPDTA X-RAY DIFFRACTION AUTHOR D.DE LUCHI,I.MARTINEZ DE ILARDUYA,J.A.SUBIRANA,I.USON,J.L.CAMPOS REVDAT 3 01-NOV-23 3HCL 1 REMARK REVDAT 2 08-DEC-10 3HCL 1 JRNL REVDAT 1 19-MAY-10 3HCL 0 JRNL AUTH I.MARTINEZ DE ILARDUYA,D.DE LUCHI,J.A.SUBIRANA,J.L.CAMPOS, JRNL AUTH 2 I.USON JRNL TITL A GEOMETRIC APPROACH TO THE CRYSTALLOGRAPHIC SOLUTION OF JRNL TITL 2 NONCONVENTIONAL DNA STRUCTURES: HELICAL SUPERSTRUCTURES OF JRNL TITL 3 D(CGATAT) JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 49 7920 2010 JRNL REFN ISSN 1433-7851 JRNL PMID 20848628 JRNL DOI 10.1002/ANIE.201003647 REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0046 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 869 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.600 REMARK 3 FREE R VALUE TEST SET COUNT : 52 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.59 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.65 REMARK 3 REFLECTION IN BIN (WORKING SET) : 60 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.5860 REMARK 3 BIN FREE R VALUE SET COUNT : 2 REMARK 3 BIN FREE R VALUE : 0.7200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 120 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 2 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 80.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.26000 REMARK 3 B22 (A**2) : 1.26000 REMARK 3 B33 (A**2) : -1.88000 REMARK 3 B12 (A**2) : 0.63000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.354 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.272 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.222 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.662 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 134 ; 0.013 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 205 ; 2.661 ; 3.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 23 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 63 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 134 ; 1.949 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 205 ; 2.971 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HCL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052968. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM16 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9783 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 924 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.590 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 0.990 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : 0.01700 REMARK 200 FOR THE DATA SET : 43.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.07100 REMARK 200 FOR SHELL : 12.50 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP VERSION 10.2.6 REMARK 200 STARTING MODEL: 231D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.88067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.94033 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.88067 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 18.94033 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 37.88067 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 18.94033 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 37.88067 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 18.94033 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ATAT PART OF THE STRUCTURE FORMS A B-DNA STRUCTURE BY REMARK 300 THE SYMMETRY OPERATION: X-Y,-Y+1,-Z. THE CG PART OF THE SEQUENCE REMARK 300 FORMS A Z-DNA STEP BY THE SYMMETRY OPERATION: X,X-Y,-Z+1/3. THE REMARK 300 CGATAT SEQUENCE PAIRS ITSELF WITH VARIOUS SYMMETRY EQUIVALENTS REMARK 300 LEADING TO A COMPLEX INTERCONNECTED SUPERSTRUCTURE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 66.38258 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 56.82100 REMARK 350 BIOMT1 3 0.500000 0.866025 0.000000 -19.16300 REMARK 350 BIOMT2 3 0.866025 -0.500000 0.000000 33.19129 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 75.76133 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC A 1 O3' DC A 1 C3' -0.039 REMARK 500 DG A 2 O3' DG A 2 C3' -0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA A 3 O3' - P - OP1 ANGL. DEV. = 7.8 DEGREES REMARK 500 DA A 3 O5' - P - OP1 ANGL. DEV. = -5.9 DEGREES REMARK 500 DT A 4 O5' - C5' - C4' ANGL. DEV. = -5.3 DEGREES REMARK 500 DT A 4 O4' - C4' - C3' ANGL. DEV. = -2.8 DEGREES REMARK 500 DT A 4 C3' - C2' - C1' ANGL. DEV. = -7.9 DEGREES REMARK 500 DT A 4 O4' - C1' - N1 ANGL. DEV. = 3.8 DEGREES REMARK 500 DT A 4 C6 - C5 - C7 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL DBREF 3HCL A 1 6 PDB 3HCL 3HCL 1 6 SEQRES 1 A 6 DC DG DA DT DA DT FORMUL 2 HOH *2(H2 O) CRYST1 38.326 38.326 56.821 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026092 0.015064 0.000000 0.00000 SCALE2 0.000000 0.030128 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017599 0.00000 ATOM 1 O5' DC A 1 6.463 31.951 41.054 1.00 38.42 O ATOM 2 C5' DC A 1 5.132 32.047 40.647 1.00 38.19 C ATOM 3 C4' DC A 1 4.744 30.730 40.024 1.00 36.84 C ATOM 4 O4' DC A 1 5.893 30.135 39.348 1.00 37.08 O ATOM 5 C3' DC A 1 4.309 29.724 41.057 1.00 36.07 C ATOM 6 O3' DC A 1 3.358 28.929 40.451 1.00 35.43 O ATOM 7 C2' DC A 1 5.588 28.923 41.277 1.00 36.21 C ATOM 8 C1' DC A 1 6.079 28.820 39.841 1.00 36.39 C ATOM 9 N1 DC A 1 7.504 28.443 39.723 1.00 35.93 N ATOM 10 C2 DC A 1 7.924 27.114 39.715 1.00 36.64 C ATOM 11 O2 DC A 1 7.087 26.201 39.811 1.00 37.32 O ATOM 12 N3 DC A 1 9.244 26.861 39.603 1.00 36.40 N ATOM 13 C4 DC A 1 10.101 27.871 39.504 1.00 38.13 C ATOM 14 N4 DC A 1 11.406 27.635 39.385 1.00 40.71 N ATOM 15 C5 DC A 1 9.695 29.213 39.502 1.00 37.31 C ATOM 16 C6 DC A 1 8.399 29.441 39.613 1.00 36.65 C ATOM 17 P DG A 2 1.835 29.289 40.713 1.00 40.40 P ATOM 18 OP1 DG A 2 1.693 29.784 42.102 1.00 35.78 O ATOM 19 OP2 DG A 2 0.962 28.186 40.190 1.00 38.36 O ATOM 20 O5' DG A 2 1.759 30.522 39.690 1.00 37.63 O ATOM 21 C5' DG A 2 1.027 30.364 38.494 1.00 34.47 C ATOM 22 C4' DG A 2 1.175 31.556 37.588 1.00 32.26 C ATOM 23 O4' DG A 2 2.358 32.292 37.914 1.00 31.65 O ATOM 24 C3' DG A 2 1.372 31.128 36.162 1.00 32.68 C ATOM 25 O3' DG A 2 0.110 31.024 35.700 1.00 34.74 O ATOM 26 C2' DG A 2 2.123 32.273 35.532 1.00 31.40 C ATOM 27 C1' DG A 2 2.758 32.954 36.748 1.00 31.38 C ATOM 28 N9 DG A 2 4.187 32.907 36.787 1.00 32.25 N ATOM 29 C8 DG A 2 5.055 33.940 37.056 1.00 34.59 C ATOM 30 N7 DG A 2 6.317 33.572 37.024 1.00 35.09 N ATOM 31 C5 DG A 2 6.254 32.200 36.729 1.00 33.81 C ATOM 32 C6 DG A 2 7.283 31.244 36.576 1.00 32.36 C ATOM 33 O6 DG A 2 8.497 31.477 36.658 1.00 32.87 O ATOM 34 N1 DG A 2 6.802 29.959 36.300 1.00 30.41 N ATOM 35 C2 DG A 2 5.454 29.649 36.193 1.00 32.40 C ATOM 36 N2 DG A 2 5.086 28.388 35.928 1.00 30.64 N ATOM 37 N3 DG A 2 4.479 30.531 36.330 1.00 33.16 N ATOM 38 C4 DG A 2 4.948 31.782 36.591 1.00 33.94 C ATOM 39 P DA A 3 -0.221 29.936 34.600 1.00 42.78 P ATOM 40 OP1 DA A 3 0.345 28.563 34.769 1.00 43.23 O ATOM 41 OP2 DA A 3 0.070 30.716 33.386 1.00 41.53 O ATOM 42 O5' DA A 3 -1.768 29.624 34.844 1.00 42.13 O ATOM 43 C5' DA A 3 -2.079 28.768 35.908 1.00 42.44 C ATOM 44 C4' DA A 3 -3.495 28.264 35.752 1.00 44.66 C ATOM 45 O4' DA A 3 -4.502 29.312 35.692 1.00 42.78 O ATOM 46 C3' DA A 3 -3.738 27.402 34.525 1.00 46.72 C ATOM 47 O3' DA A 3 -4.755 26.490 34.952 1.00 51.32 O ATOM 48 C2' DA A 3 -4.266 28.419 33.526 1.00 44.91 C ATOM 49 C1' DA A 3 -5.084 29.360 34.407 1.00 42.28 C ATOM 50 N9 DA A 3 -4.995 30.753 34.005 1.00 41.63 N ATOM 51 C8 DA A 3 -3.825 31.450 33.757 1.00 42.20 C ATOM 52 N7 DA A 3 -3.993 32.713 33.419 1.00 40.72 N ATOM 53 C5 DA A 3 -5.375 32.848 33.451 1.00 38.73 C ATOM 54 C6 DA A 3 -6.172 33.957 33.190 1.00 36.94 C ATOM 55 N6 DA A 3 -5.612 35.113 32.847 1.00 35.23 N ATOM 56 N1 DA A 3 -7.513 33.820 33.308 1.00 36.71 N ATOM 57 C2 DA A 3 -8.020 32.617 33.652 1.00 37.71 C ATOM 58 N3 DA A 3 -7.359 31.479 33.930 1.00 39.01 N ATOM 59 C4 DA A 3 -6.022 31.664 33.806 1.00 40.17 C ATOM 60 P DT A 4 -5.351 25.298 34.064 1.00 53.58 P ATOM 61 OP1 DT A 4 -5.887 24.322 35.065 1.00 50.66 O ATOM 62 OP2 DT A 4 -4.365 25.047 32.962 1.00 49.66 O ATOM 63 O5' DT A 4 -6.618 25.973 33.366 1.00 51.59 O ATOM 64 C5' DT A 4 -7.780 26.369 34.087 1.00 50.92 C ATOM 65 C4' DT A 4 -8.705 26.928 33.019 1.00 50.36 C ATOM 66 O4' DT A 4 -8.401 28.314 32.688 1.00 48.94 O ATOM 67 C3' DT A 4 -8.546 26.244 31.664 1.00 50.93 C ATOM 68 O3' DT A 4 -9.824 26.265 31.060 1.00 52.44 O ATOM 69 C2' DT A 4 -7.566 27.139 30.892 1.00 47.58 C ATOM 70 C1' DT A 4 -8.257 28.435 31.279 1.00 45.20 C ATOM 71 N1 DT A 4 -7.510 29.648 30.899 1.00 41.89 N ATOM 72 C2 DT A 4 -8.160 30.858 30.706 1.00 40.85 C ATOM 73 O2 DT A 4 -9.359 31.028 30.835 1.00 42.27 O ATOM 74 N3 DT A 4 -7.366 31.897 30.351 1.00 38.11 N ATOM 75 C4 DT A 4 -6.013 31.834 30.161 1.00 39.31 C ATOM 76 O4 DT A 4 -5.362 32.831 29.839 1.00 40.51 O ATOM 77 C5 DT A 4 -5.406 30.541 30.381 1.00 39.17 C ATOM 78 C7 DT A 4 -3.926 30.338 30.228 1.00 40.63 C ATOM 79 C6 DT A 4 -6.166 29.514 30.728 1.00 39.35 C ATOM 80 P DA A 5 -10.529 24.878 30.744 1.00 50.99 P ATOM 81 OP1 DA A 5 -10.811 24.378 32.124 1.00 49.85 O ATOM 82 OP2 DA A 5 -9.661 24.180 29.728 1.00 48.94 O ATOM 83 O5' DA A 5 -11.913 25.311 30.059 1.00 47.19 O ATOM 84 C5' DA A 5 -12.665 26.312 30.719 1.00 44.82 C ATOM 85 C4' DA A 5 -13.347 27.218 29.717 1.00 43.35 C ATOM 86 O4' DA A 5 -12.509 28.329 29.297 1.00 41.33 O ATOM 87 C3' DA A 5 -13.739 26.513 28.439 1.00 43.99 C ATOM 88 O3' DA A 5 -14.943 27.110 28.017 1.00 47.33 O ATOM 89 C2' DA A 5 -12.567 26.839 27.511 1.00 41.43 C ATOM 90 C1' DA A 5 -12.238 28.277 27.906 1.00 39.04 C ATOM 91 N9 DA A 5 -10.834 28.667 27.726 1.00 35.89 N ATOM 92 C8 DA A 5 -9.738 27.853 27.834 1.00 35.19 C ATOM 93 N7 DA A 5 -8.579 28.443 27.639 1.00 32.92 N ATOM 94 C5 DA A 5 -8.932 29.743 27.393 1.00 31.78 C ATOM 95 C6 DA A 5 -8.157 30.865 27.137 1.00 31.10 C ATOM 96 N6 DA A 5 -6.841 30.805 27.070 1.00 31.13 N ATOM 97 N1 DA A 5 -8.760 32.048 26.932 1.00 32.55 N ATOM 98 C2 DA A 5 -10.098 32.086 26.984 1.00 34.78 C ATOM 99 N3 DA A 5 -10.947 31.065 27.232 1.00 36.60 N ATOM 100 C4 DA A 5 -10.298 29.906 27.441 1.00 34.27 C ATOM 101 P DT A 6 -15.518 26.783 26.558 1.00 50.94 P ATOM 102 OP1 DT A 6 -16.945 27.185 26.657 1.00 50.49 O ATOM 103 OP2 DT A 6 -15.058 25.422 26.155 1.00 48.73 O ATOM 104 O5' DT A 6 -14.887 27.866 25.577 1.00 49.87 O ATOM 105 C5' DT A 6 -15.418 29.160 25.794 1.00 50.87 C ATOM 106 C4' DT A 6 -14.953 30.091 24.710 1.00 50.56 C ATOM 107 O4' DT A 6 -13.521 30.203 24.827 1.00 49.12 O ATOM 108 C3' DT A 6 -15.234 29.578 23.304 1.00 50.73 C ATOM 109 O3' DT A 6 -15.766 30.659 22.550 1.00 52.17 O ATOM 110 C2' DT A 6 -13.859 29.164 22.792 1.00 49.56 C ATOM 111 C1' DT A 6 -12.988 30.170 23.529 1.00 47.70 C ATOM 112 N1 DT A 6 -11.558 29.826 23.696 1.00 45.69 N ATOM 113 C2 DT A 6 -10.665 30.862 23.667 1.00 44.11 C ATOM 114 O2 DT A 6 -11.012 32.020 23.501 1.00 44.63 O ATOM 115 N3 DT A 6 -9.361 30.487 23.829 1.00 42.39 N ATOM 116 C4 DT A 6 -8.898 29.208 24.019 1.00 42.83 C ATOM 117 O4 DT A 6 -7.707 28.976 24.152 1.00 42.94 O ATOM 118 C5 DT A 6 -9.892 28.166 24.033 1.00 42.20 C ATOM 119 C7 DT A 6 -9.506 26.742 24.230 1.00 41.34 C ATOM 120 C6 DT A 6 -11.161 28.517 23.884 1.00 43.56 C TER 121 DT A 6 HETATM 122 O HOH A 7 -13.684 31.445 27.438 1.00 40.78 O HETATM 123 O HOH A 8 -8.643 29.731 35.642 1.00 46.80 O MASTER 320 0 0 0 0 0 0 6 122 1 0 1 END