HEADER DNA 13-MAY-09 3HG8 TITLE CRYSTAL STRUCTURE OF 5-SME DERIVATIZED DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*GP*(UMS)P*GP*(US2)P*AP*CP*AP*C)-3'; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1 KEYWDS 5-SME DNA, DNA EXPDTA X-RAY DIFFRACTION AUTHOR J.SHENG,A.E.A.HASSAN,W.ZHANG,Z.HUANG REVDAT 6 22-MAY-24 3HG8 1 REMARK REVDAT 5 02-AUG-23 3HG8 1 SOURCE JRNL LINK REVDAT 4 24-JUL-19 3HG8 1 REMARK REVDAT 3 24-JAN-18 3HG8 1 AUTHOR REVDAT 2 01-NOV-17 3HG8 1 REMARK REVDAT 1 21-JUL-09 3HG8 0 JRNL AUTH Z.FANG,Y.DANTSU,C.CHEN,W.ZHANG,Z.HUANG JRNL TITL SYNTHESIS OF PYRIMIDINE MODIFIED SELENO-DNA AS A NOVEL JRNL TITL 2 APPROACH TO ANTISENSE CANDIDATE JRNL REF CHEMISTRYSELECT V. 8 2023 JRNL REFN ESSN 2365-6549 JRNL DOI 10.1002/SLCT.202302253 REMARK 2 REMARK 2 RESOLUTION. 1.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 4373 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 216 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.38 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 215 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 65.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 REMARK 3 BIN FREE R VALUE SET COUNT : 14 REMARK 3 BIN FREE R VALUE : 0.2220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 163 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 38 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.064 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.059 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.033 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.849 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 178 ; 0.007 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 262 ; 3.116 ; 3.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 30 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 81 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 74 ; 0.477 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 100 ; 0.285 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 34 ; 0.111 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 29 ; 0.195 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.076 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 253 ; 0.871 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 262 ; 1.266 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3HG8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053095. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC Q4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4616 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.380 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.0150 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.24000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPD,SODIUM CACODYLATE,SPERMINE TETRA REMARK 280 -HCL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 11.84350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.44100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.44100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 17.76525 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.44100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.44100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 5.92175 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.44100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.44100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 17.76525 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.44100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.44100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 5.92175 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 11.84350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 2940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC A 8 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HGA RELATED DB: PDB REMARK 900 RELATED ID: 3HGD RELATED DB: PDB DBREF 3HG8 A 1 8 PDB 3HG8 3HG8 1 8 SEQRES 1 A 8 DG UMS DG US2 DA DC DA DC MODRES 3HG8 UMS A 2 DU MODRES 3HG8 US2 A 4 DU HET UMS A 2 21 HET US2 A 4 21 HETNAM UMS 2'-METHYLSELENYL-2'-DEOXYURIDINE-5'-PHOSPHATE HETNAM US2 2'-DEOXY-5-(METHYLSULFANYL)URIDINE 5'-(DIHYDROGEN HETNAM 2 US2 PHOSPHATE) HETSYN US2 5-SME-DEOXYURIDINE-5'-PHOSPHATE FORMUL 1 UMS C10 H15 N2 O8 P SE FORMUL 1 US2 C10 H15 N2 O8 P S FORMUL 2 HOH *38(H2 O) LINK O3' DG A 1 P UMS A 2 1555 1555 1.61 LINK O3' UMS A 2 P DG A 3 1555 1555 1.60 LINK O3' DG A 3 P US2 A 4 1555 1555 1.60 LINK O3' US2 A 4 P DA A 5 1555 1555 1.61 CRYST1 42.882 42.882 23.687 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023320 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023320 0.000000 0.00000 SCALE3 0.000000 0.000000 0.042217 0.00000 ATOM 1 O5' DG A 1 29.197 18.988 -5.273 1.00 11.21 O ATOM 2 C5' DG A 1 29.115 17.578 -5.026 1.00 9.20 C ATOM 3 C4' DG A 1 30.359 17.047 -4.332 1.00 9.37 C ATOM 4 O4' DG A 1 31.536 17.255 -5.147 1.00 9.05 O ATOM 5 C3' DG A 1 30.717 17.748 -3.039 1.00 8.81 C ATOM 6 O3' DG A 1 29.925 17.241 -1.919 1.00 9.58 O ATOM 7 C2' DG A 1 32.199 17.433 -2.897 1.00 8.91 C ATOM 8 C1' DG A 1 32.647 17.591 -4.341 1.00 9.37 C ATOM 9 N9 DG A 1 33.050 18.964 -4.632 1.00 9.22 N ATOM 10 C8 DG A 1 32.296 19.945 -5.235 1.00 9.84 C ATOM 11 N7 DG A 1 32.922 21.084 -5.344 1.00 9.84 N ATOM 12 C5 DG A 1 34.165 20.844 -4.769 1.00 9.22 C ATOM 13 C6 DG A 1 35.276 21.703 -4.603 1.00 9.12 C ATOM 14 O6 DG A 1 35.375 22.886 -4.947 1.00 10.25 O ATOM 15 N1 DG A 1 36.343 21.070 -3.972 1.00 9.64 N ATOM 16 C2 DG A 1 36.340 19.753 -3.559 1.00 9.86 C ATOM 17 N2 DG A 1 37.459 19.302 -2.974 1.00 11.04 N ATOM 18 N3 DG A 1 35.305 18.932 -3.714 1.00 9.58 N ATOM 19 C4 DG A 1 34.257 19.543 -4.319 1.00 9.30 C HETATM 20 P UMS A 2 29.426 18.151 -0.695 1.00 10.23 P HETATM 21 OP1 UMS A 2 28.549 17.304 0.195 1.00 11.53 O HETATM 22 OP2 UMS A 2 28.903 19.498 -1.199 1.00 11.37 O HETATM 23 O5' UMS A 2 30.756 18.514 0.129 1.00 9.42 O HETATM 24 C5' UMS A 2 31.434 17.474 0.821 1.00 9.60 C HETATM 25 C4' UMS A 2 32.827 17.915 1.216 1.00 10.02 C HETATM 26 O4' UMS A 2 33.596 18.358 0.097 1.00 9.77 O HETATM 27 C3' UMS A 2 32.809 19.115 2.123 1.00 10.82 C HETATM 28 O3' UMS A 2 32.438 18.711 3.502 1.00 12.74 O HETATM 29 C2' UMS A 2 34.206 19.674 1.981 1.00 10.78 C HETATM 30 SE2' UMS A 2 35.471 18.594 3.062 0.80 11.99 SE HETATM 31 C1' UMS A 2 34.445 19.445 0.498 1.00 9.59 C HETATM 32 CA' UMS A 2 37.045 19.768 2.874 1.00 12.50 C HETATM 33 N1 UMS A 2 34.115 20.614 -0.341 1.00 9.99 N HETATM 34 C2 UMS A 2 35.040 21.577 -0.529 1.00 9.93 C HETATM 35 O2 UMS A 2 36.157 21.505 0.024 1.00 10.75 O HETATM 36 N3 UMS A 2 34.772 22.650 -1.308 1.00 9.75 N HETATM 37 C4 UMS A 2 33.582 22.799 -1.932 1.00 9.60 C HETATM 38 O4 UMS A 2 33.374 23.809 -2.642 1.00 10.03 O HETATM 39 C5 UMS A 2 32.608 21.816 -1.762 1.00 10.40 C HETATM 40 C6 UMS A 2 32.913 20.720 -0.952 1.00 9.83 C ATOM 41 P DG A 3 31.695 19.667 4.545 1.00 18.19 P ATOM 42 OP1 DG A 3 31.207 18.771 5.693 1.00 20.31 O ATOM 43 OP2 DG A 3 30.605 20.601 3.951 1.00 19.59 O ATOM 44 O5' DG A 3 32.868 20.549 5.046 1.00 17.68 O ATOM 45 C5' DG A 3 32.833 21.954 4.991 1.00 15.43 C ATOM 46 C4' DG A 3 34.254 22.464 4.938 1.00 14.92 C ATOM 47 O4' DG A 3 34.747 22.332 3.587 1.00 13.73 O ATOM 48 C3' DG A 3 34.369 23.938 5.235 1.00 13.80 C ATOM 49 O3' DG A 3 34.471 24.196 6.674 1.00 14.02 O ATOM 50 C2' DG A 3 35.600 24.345 4.437 1.00 12.93 C ATOM 51 C1' DG A 3 35.426 23.503 3.182 1.00 11.30 C ATOM 52 N9 DG A 3 34.642 24.138 2.126 1.00 10.93 N ATOM 53 C8 DG A 3 33.418 23.749 1.630 1.00 10.39 C ATOM 54 N7 DG A 3 32.974 24.515 0.672 1.00 10.49 N ATOM 55 C5 DG A 3 33.973 25.473 0.515 1.00 9.82 C ATOM 56 C6 DG A 3 34.069 26.579 -0.369 1.00 9.47 C ATOM 57 O6 DG A 3 33.257 26.940 -1.228 1.00 10.02 O ATOM 58 N1 DG A 3 35.253 27.300 -0.189 1.00 9.76 N ATOM 59 C2 DG A 3 36.227 26.997 0.734 1.00 9.89 C ATOM 60 N2 DG A 3 37.311 27.792 0.786 1.00 9.91 N ATOM 61 N3 DG A 3 36.153 25.966 1.563 1.00 9.89 N ATOM 62 C4 DG A 3 35.005 25.254 1.402 1.00 10.41 C HETATM 63 P US2 A 4 34.001 25.558 7.372 1.00 14.39 P HETATM 64 N1 US2 A 4 35.372 29.048 3.435 1.00 9.77 N HETATM 65 C6 US2 A 4 34.357 28.253 3.443 1.00 10.32 C HETATM 66 C2 US2 A 4 35.159 29.952 2.463 1.00 8.96 C HETATM 67 O2 US2 A 4 35.942 30.909 2.268 1.00 8.63 O HETATM 68 N3 US2 A 4 34.008 29.859 1.724 1.00 8.94 N HETATM 69 C4 US2 A 4 33.039 28.901 1.918 1.00 9.01 C HETATM 70 O4 US2 A 4 32.030 28.912 1.183 1.00 9.30 O HETATM 71 C5 US2 A 4 33.224 27.948 2.928 1.00 9.13 C HETATM 72 S5 US2 A 4 32.130 26.680 3.281 1.00 10.91 S HETATM 73 C5A US2 A 4 30.930 27.511 4.262 1.00 12.81 C HETATM 74 C1' US2 A 4 36.618 29.041 4.216 1.00 10.06 C HETATM 75 O4' US2 A 4 36.841 27.771 4.836 1.00 11.19 O HETATM 76 C4' US2 A 4 36.915 27.937 6.252 1.00 10.89 C HETATM 77 C3' US2 A 4 36.146 29.209 6.513 1.00 10.66 C HETATM 78 O3' US2 A 4 36.441 29.831 7.806 1.00 10.57 O HETATM 79 C2' US2 A 4 36.499 30.076 5.327 1.00 10.50 C HETATM 80 C5' US2 A 4 36.321 26.746 6.978 1.00 11.63 C HETATM 81 O5' US2 A 4 34.927 26.697 6.697 1.00 12.74 O HETATM 82 O1P US2 A 4 32.563 25.853 7.070 1.00 13.25 O HETATM 83 O2P US2 A 4 34.456 25.402 8.834 1.00 16.30 O ATOM 84 P DA A 5 35.473 30.889 8.530 1.00 11.90 P ATOM 85 OP1 DA A 5 35.895 30.928 9.976 1.00 12.61 O ATOM 86 OP2 DA A 5 34.012 30.635 8.250 1.00 13.38 O ATOM 87 O5' DA A 5 35.908 32.260 7.840 1.00 9.43 O ATOM 88 C5' DA A 5 35.000 33.323 7.606 1.00 9.57 C ATOM 89 C4' DA A 5 35.544 34.168 6.474 1.00 8.39 C ATOM 90 O4' DA A 5 35.699 33.344 5.289 1.00 7.77 O ATOM 91 C3' DA A 5 34.652 35.322 6.051 1.00 8.70 C ATOM 92 O3' DA A 5 34.977 36.451 6.831 1.00 9.25 O ATOM 93 C2' DA A 5 35.035 35.502 4.592 1.00 8.02 C ATOM 94 C1' DA A 5 35.191 34.048 4.172 1.00 7.57 C ATOM 95 N9 DA A 5 33.966 33.375 3.723 1.00 7.34 N ATOM 96 C8 DA A 5 33.335 32.315 4.322 1.00 7.34 C ATOM 97 N7 DA A 5 32.275 31.898 3.685 1.00 6.77 N ATOM 98 C5 DA A 5 32.210 32.734 2.578 1.00 7.20 C ATOM 99 C6 DA A 5 31.309 32.807 1.495 1.00 7.06 C ATOM 100 N6 DA A 5 30.269 31.982 1.359 1.00 8.14 N ATOM 101 N1 DA A 5 31.524 33.761 0.559 1.00 6.77 N ATOM 102 C2 DA A 5 32.566 34.596 0.701 1.00 7.14 C ATOM 103 N3 DA A 5 33.482 34.616 1.675 1.00 7.56 N ATOM 104 C4 DA A 5 33.247 33.653 2.585 1.00 7.26 C ATOM 105 P DC A 6 33.835 37.463 7.308 1.00 10.01 P ATOM 106 OP1 DC A 6 34.520 38.542 8.072 1.00 11.65 O ATOM 107 OP2 DC A 6 32.724 36.710 7.898 1.00 10.92 O ATOM 108 O5' DC A 6 33.303 38.098 5.947 1.00 9.81 O ATOM 109 C5' DC A 6 34.123 38.991 5.204 1.00 9.94 C ATOM 110 C4' DC A 6 33.436 39.328 3.899 1.00 9.77 C ATOM 111 O4' DC A 6 33.275 38.126 3.109 1.00 9.09 O ATOM 112 C3' DC A 6 32.011 39.842 4.051 1.00 10.22 C ATOM 113 O3' DC A 6 31.979 41.213 4.443 1.00 12.67 O ATOM 114 C2' DC A 6 31.476 39.617 2.645 1.00 9.86 C ATOM 115 C1' DC A 6 32.064 38.237 2.375 1.00 8.98 C ATOM 116 N1 DC A 6 31.152 37.097 2.716 1.00 8.36 N ATOM 117 C2 DC A 6 30.115 36.786 1.825 1.00 8.28 C ATOM 118 O2 DC A 6 29.983 37.471 0.803 1.00 8.30 O ATOM 119 N3 DC A 6 29.288 35.745 2.108 1.00 7.56 N ATOM 120 C4 DC A 6 29.457 35.032 3.227 1.00 8.40 C ATOM 121 N4 DC A 6 28.616 34.016 3.450 1.00 8.61 N ATOM 122 C5 DC A 6 30.502 35.329 4.156 1.00 8.13 C ATOM 123 C6 DC A 6 31.315 36.358 3.862 1.00 7.92 C ATOM 124 P DA A 7 30.718 41.816 5.228 1.00 13.87 P ATOM 125 OP1 DA A 7 31.165 43.161 5.706 1.00 14.80 O ATOM 126 OP2 DA A 7 30.208 40.814 6.189 1.00 13.68 O ATOM 127 O5' DA A 7 29.679 41.980 4.068 1.00 11.80 O ATOM 128 C5' DA A 7 29.873 42.934 3.027 1.00 11.89 C ATOM 129 C4' DA A 7 28.694 42.842 2.084 1.00 11.33 C ATOM 130 O4' DA A 7 28.598 41.502 1.544 1.00 11.37 O ATOM 131 C3' DA A 7 27.357 43.066 2.762 1.00 11.25 C ATOM 132 O3' DA A 7 27.091 44.451 2.817 1.00 12.15 O ATOM 133 C2' DA A 7 26.376 42.326 1.868 1.00 10.43 C ATOM 134 C1' DA A 7 27.231 41.154 1.416 1.00 9.38 C ATOM 135 N9 DA A 7 27.061 39.889 2.127 1.00 8.57 N ATOM 136 C8 DA A 7 27.805 39.403 3.173 1.00 8.48 C ATOM 137 N7 DA A 7 27.421 38.214 3.579 1.00 8.24 N ATOM 138 C5 DA A 7 26.368 37.890 2.730 1.00 8.46 C ATOM 139 C6 DA A 7 25.527 36.756 2.627 1.00 8.48 C ATOM 140 N6 DA A 7 25.643 35.689 3.423 1.00 8.48 N ATOM 141 N1 DA A 7 24.564 36.766 1.670 1.00 8.62 N ATOM 142 C2 DA A 7 24.449 37.837 0.871 1.00 8.67 C ATOM 143 N3 DA A 7 25.180 38.956 0.867 1.00 9.36 N ATOM 144 C4 DA A 7 26.128 38.918 1.831 1.00 8.60 C ATOM 145 P DC A 8 26.212 45.061 3.976 1.00 13.09 P ATOM 146 OP1 DC A 8 26.240 46.537 3.795 1.00 14.21 O ATOM 147 OP2 DC A 8 26.650 44.488 5.268 1.00 14.45 O ATOM 148 O5' DC A 8 24.745 44.546 3.631 1.00 12.40 O ATOM 149 C5' DC A 8 24.090 45.069 2.472 1.00 13.26 C ATOM 150 C4' DC A 8 22.748 44.409 2.236 1.00 13.60 C ATOM 151 O4' DC A 8 22.948 42.973 2.143 1.00 12.98 O ATOM 152 C3' DC A 8 21.709 44.661 3.326 1.00 14.44 C ATOM 153 O3' DC A 8 20.463 44.981 2.719 1.00 17.41 O ATOM 154 C2' DC A 8 21.632 43.337 4.075 1.00 13.72 C ATOM 155 C1' DC A 8 22.044 42.320 3.009 1.00 12.57 C ATOM 156 N1 DC A 8 22.674 41.112 3.618 1.00 11.95 N ATOM 157 C2 DC A 8 22.131 39.839 3.369 1.00 11.48 C ATOM 158 O2 DC A 8 21.143 39.721 2.630 1.00 11.66 O ATOM 159 N3 DC A 8 22.711 38.759 3.962 1.00 11.23 N ATOM 160 C4 DC A 8 23.782 38.909 4.755 1.00 11.12 C ATOM 161 N4 DC A 8 24.308 37.811 5.314 1.00 10.53 N ATOM 162 C5 DC A 8 24.356 40.196 5.010 1.00 11.19 C ATOM 163 C6 DC A 8 23.773 41.250 4.431 1.00 11.29 C TER 164 DC A 8 HETATM 165 O HOH A 20 35.851 36.159 1.342 1.00 8.83 O HETATM 166 O HOH A 22 23.940 41.435 -0.241 1.00 14.18 O HETATM 167 O HOH A 24 26.127 47.812 1.468 1.00 13.94 O HETATM 168 O HOH A 25 26.133 16.485 -0.735 1.00 13.68 O HETATM 169 O HOH A 27 20.922 38.770 0.009 1.00 14.46 O HETATM 170 O HOH A 28 31.360 25.824 -2.802 1.00 12.41 O HETATM 171 O HOH A 29 30.045 31.054 5.013 1.00 22.75 O HETATM 172 O HOH A 30 30.469 24.484 6.082 1.00 20.87 O HETATM 173 O HOH A 31 28.448 19.661 -7.898 1.00 16.09 O HETATM 174 O HOH A 32 27.361 16.965 -8.511 1.00 13.05 O HETATM 175 O HOH A 34 17.921 38.593 -0.022 1.00 21.33 O HETATM 176 O HOH A 35 41.604 18.357 -3.859 1.00 19.89 O HETATM 177 O HOH A 36 38.885 16.927 -2.746 1.00 16.22 O HETATM 178 O HOH A 37 30.500 24.484 -0.479 1.00 21.03 O HETATM 179 O HOH A 38 24.580 15.515 1.370 1.00 23.37 O HETATM 180 O HOH A 40 31.506 34.058 7.430 1.00 17.44 O HETATM 181 O HOH A 41 25.894 42.750 7.029 1.00 21.92 O HETATM 182 O HOH A 42 29.174 21.866 0.189 1.00 22.17 O HETATM 183 O HOH A 45 31.386 22.848 -6.643 1.00 24.73 O HETATM 184 O HOH A 46 28.090 16.920 2.642 1.00 24.28 O HETATM 185 O HOH A 49 36.115 22.688 8.773 1.00 28.60 O HETATM 186 O HOH A 50 31.883 31.931 8.949 1.00 23.02 O HETATM 187 O HOH A 51 33.967 24.646 -6.307 1.00 19.95 O HETATM 188 O HOH A 52 27.836 20.391 -3.401 1.00 24.46 O HETATM 189 O HOH A 53 27.660 40.693 7.163 1.00 23.04 O HETATM 190 O HOH A 54 33.531 35.645 10.422 1.00 22.07 O HETATM 191 O HOH A 55 29.683 24.022 3.573 1.00 24.48 O HETATM 192 O HOH A 57 28.931 33.317 6.498 1.00 31.40 O HETATM 193 O HOH A 58 27.979 36.718 5.977 1.00 21.26 O HETATM 194 O HOH A 59 31.408 15.830 5.330 1.00 20.45 O HETATM 195 O HOH A 60 28.274 29.992 3.032 1.00 26.02 O HETATM 196 O HOH A 61 30.301 37.974 7.585 1.00 28.54 O HETATM 197 O HOH A 62 29.397 28.268 1.172 1.00 24.50 O HETATM 198 O HOH A 63 28.833 15.018 4.315 1.00 24.84 O HETATM 199 O HOH A 67 28.974 45.107 6.386 1.00 30.75 O HETATM 200 O HOH A 69 32.437 28.561 7.473 1.00 31.59 O HETATM 201 O HOH A 73 37.300 21.595 6.282 1.00 33.78 O HETATM 202 O HOH A 80 31.565 25.187 10.518 1.00 37.67 O CONECT 6 20 CONECT 20 6 21 22 23 CONECT 21 20 CONECT 22 20 CONECT 23 20 24 CONECT 24 23 25 CONECT 25 24 26 27 CONECT 26 25 31 CONECT 27 25 28 29 CONECT 28 27 41 CONECT 29 27 30 31 CONECT 30 29 32 CONECT 31 26 29 33 CONECT 32 30 CONECT 33 31 34 40 CONECT 34 33 35 36 CONECT 35 34 CONECT 36 34 37 CONECT 37 36 38 39 CONECT 38 37 CONECT 39 37 40 CONECT 40 33 39 CONECT 41 28 CONECT 49 63 CONECT 63 49 81 82 83 CONECT 64 65 66 74 CONECT 65 64 71 CONECT 66 64 67 68 CONECT 67 66 CONECT 68 66 69 CONECT 69 68 70 71 CONECT 70 69 CONECT 71 65 69 72 CONECT 72 71 73 CONECT 73 72 CONECT 74 64 75 79 CONECT 75 74 76 CONECT 76 75 77 80 CONECT 77 76 78 79 CONECT 78 77 84 CONECT 79 74 77 CONECT 80 76 81 CONECT 81 63 80 CONECT 82 63 CONECT 83 63 CONECT 84 78 MASTER 281 0 2 0 0 0 0 6 201 1 46 1 END