HEADER DNA 06-JUN-09 3HQE TITLE CRYSTAL STRUCTURE OF THE DECAMER CGGGCGCCCG FORMING A HOLLIDAY TITLE 2 JUNCTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*CP*GP*GP*GP*CP*GP*CP*CP*CP*G)-3'; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS FOUR-WAY JUNCTION WITH B-DNA ARMS, DNA EXPDTA X-RAY DIFFRACTION AUTHOR S.VENKADESH,P.K.MANDAL,N.GAUTHAM REVDAT 2 01-NOV-23 3HQE 1 DBREF REVDAT 1 09-JUN-10 3HQE 0 JRNL AUTH S.VENKADESH,P.K.MANDAL,N.GAUTHAM JRNL TITL SEQUENCE DEPENDENT STRUCTURAL VARIATION OF HOLLIDAY JUNCTION JRNL TITL 2 - CRYSTAL STRUCTURE OF D(CGGGCGCCCG)4 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 1073 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 56 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.94 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 71 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.5340 REMARK 3 BIN FREE R VALUE SET COUNT : 4 REMARK 3 BIN FREE R VALUE : 0.7990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 404 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 10 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 64.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.15000 REMARK 3 B22 (A**2) : -0.97000 REMARK 3 B33 (A**2) : 0.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.71000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.456 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.321 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.845 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 452 ; 0.019 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 694 ; 3.158 ; 3.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 78 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 210 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 115 ; 0.274 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 250 ; 0.350 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 9 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 44 ; 0.187 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.260 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 666 ; 5.115 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 694 ; 4.326 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HQE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1000053454. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOMAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1239 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.510 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : 0.10900 REMARK 200 FOR THE DATA SET : 2.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.54 REMARK 200 R MERGE FOR SHELL (I) : 0.45790 REMARK 200 R SYM FOR SHELL (I) : 0.41620 REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ID 1P4Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: DROP CONTAINS 1MM DNA, 50MM BUFFER, REMARK 280 100MM MGCL2, 1MM SPERMINE, 50% MPD IN RESERVIOR , PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 32.50200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 11.40650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 32.50200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 11.40650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -18.32261 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 36.35139 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC A 5 O3' DC A 5 C3' -0.036 REMARK 500 DC B 11 O3' DC B 11 C3' -0.102 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC A 1 N1 - C1' - C2' ANGL. DEV. = 8.7 DEGREES REMARK 500 DG A 2 C3' - C2' - C1' ANGL. DEV. = -5.0 DEGREES REMARK 500 DG A 2 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG A 3 O4' - C1' - C2' ANGL. DEV. = 3.1 DEGREES REMARK 500 DG A 3 O4' - C1' - N9 ANGL. DEV. = 2.8 DEGREES REMARK 500 DG A 3 C6 - N1 - C2 ANGL. DEV. = -3.8 DEGREES REMARK 500 DG A 3 C5 - C6 - O6 ANGL. DEV. = -5.7 DEGREES REMARK 500 DG A 4 N1 - C2 - N3 ANGL. DEV. = 3.6 DEGREES REMARK 500 DG A 4 C2 - N3 - C4 ANGL. DEV. = -3.4 DEGREES REMARK 500 DG A 4 C6 - C5 - N7 ANGL. DEV. = -4.3 DEGREES REMARK 500 DG A 4 N1 - C2 - N2 ANGL. DEV. = -7.0 DEGREES REMARK 500 DG A 4 C3' - O3' - P ANGL. DEV. = 15.1 DEGREES REMARK 500 DC A 5 O5' - P - OP1 ANGL. DEV. = -7.9 DEGREES REMARK 500 DC A 5 C5' - C4' - O4' ANGL. DEV. = 6.8 DEGREES REMARK 500 DC A 5 O4' - C1' - C2' ANGL. DEV. = -6.1 DEGREES REMARK 500 DC A 5 O4' - C1' - N1 ANGL. DEV. = 3.7 DEGREES REMARK 500 DG A 6 O4' - C1' - C2' ANGL. DEV. = -5.8 DEGREES REMARK 500 DG A 6 N1 - C2 - N3 ANGL. DEV. = 3.8 DEGREES REMARK 500 DG A 6 N7 - C8 - N9 ANGL. DEV. = 3.5 DEGREES REMARK 500 DG A 6 C8 - N9 - C4 ANGL. DEV. = -4.4 DEGREES REMARK 500 DC A 8 P - O5' - C5' ANGL. DEV. = -13.2 DEGREES REMARK 500 DC A 8 O4' - C1' - N1 ANGL. DEV. = -4.7 DEGREES REMARK 500 DC A 8 C6 - N1 - C2 ANGL. DEV. = 3.4 DEGREES REMARK 500 DC A 8 C5 - C6 - N1 ANGL. DEV. = -3.3 DEGREES REMARK 500 DC A 9 C4' - C3' - C2' ANGL. DEV. = -4.6 DEGREES REMARK 500 DC A 9 N3 - C4 - C5 ANGL. DEV. = 3.2 DEGREES REMARK 500 DC A 9 C5 - C4 - N4 ANGL. DEV. = -4.7 DEGREES REMARK 500 DG A 10 O4' - C4' - C3' ANGL. DEV. = -5.2 DEGREES REMARK 500 DC B 11 C1' - O4' - C4' ANGL. DEV. = -6.4 DEGREES REMARK 500 DC B 11 N1 - C1' - C2' ANGL. DEV. = 8.5 DEGREES REMARK 500 DC B 11 O4' - C1' - N1 ANGL. DEV. = -4.9 DEGREES REMARK 500 DG B 12 C6 - N1 - C2 ANGL. DEV. = -3.9 DEGREES REMARK 500 DG B 14 O4' - C4' - C3' ANGL. DEV. = -3.8 DEGREES REMARK 500 DG B 14 N9 - C1' - C2' ANGL. DEV. = 8.9 DEGREES REMARK 500 DG B 14 N3 - C4 - C5 ANGL. DEV. = -3.2 DEGREES REMARK 500 DC B 15 O4' - C1' - C2' ANGL. DEV. = -5.1 DEGREES REMARK 500 DC B 15 C6 - N1 - C2 ANGL. DEV. = -3.6 DEGREES REMARK 500 DG B 16 C3' - C2' - C1' ANGL. DEV. = -6.2 DEGREES REMARK 500 DG B 16 O4' - C1' - C2' ANGL. DEV. = -5.4 DEGREES REMARK 500 DG B 16 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DG B 16 C5 - C6 - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 DG B 16 N3 - C4 - N9 ANGL. DEV. = 3.9 DEGREES REMARK 500 DG B 16 C5 - C6 - O6 ANGL. DEV. = -3.9 DEGREES REMARK 500 DC B 17 N3 - C2 - O2 ANGL. DEV. = -4.3 DEGREES REMARK 500 DC B 18 N3 - C4 - C5 ANGL. DEV. = 3.9 DEGREES REMARK 500 DC B 18 C4 - C5 - C6 ANGL. DEV. = -3.1 DEGREES REMARK 500 DC B 19 O4' - C1' - N1 ANGL. DEV. = -4.6 DEGREES REMARK 500 DG B 20 O4' - C4' - C3' ANGL. DEV. = -5.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HS1 RELATED DB: PDB REMARK 900 STRUCTURE OF HOLLIDAY JUNCTION FORMED BY D(CCGGTACCGG); CRYSTAL REMARK 900 GROWN WITH COCL2 DBREF 3HQE A 1 10 PDB 3HQE 3HQE 1 10 DBREF 3HQE B 11 20 PDB 3HQE 3HQE 11 20 SEQRES 1 A 10 DC DG DG DG DC DG DC DC DC DG SEQRES 1 B 10 DC DG DG DG DC DG DC DC DC DG FORMUL 3 HOH *10(H2 O) CRYST1 65.004 22.813 40.708 90.00 116.75 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015384 0.000000 0.007754 0.00000 SCALE2 0.000000 0.043835 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027509 0.00000 ATOM 1 O5' DC A 1 8.041 -3.580 1.154 1.00 64.44 O ATOM 2 C5' DC A 1 8.422 -4.866 0.657 1.00 63.20 C ATOM 3 C4' DC A 1 8.542 -5.843 1.809 1.00 61.36 C ATOM 4 O4' DC A 1 9.013 -5.196 3.021 1.00 60.04 O ATOM 5 C3' DC A 1 7.204 -6.374 2.169 1.00 60.78 C ATOM 6 O3' DC A 1 7.366 -7.758 2.175 1.00 63.67 O ATOM 7 C2' DC A 1 6.853 -5.743 3.525 1.00 58.92 C ATOM 8 C1' DC A 1 8.212 -5.495 4.134 1.00 56.50 C ATOM 9 N1 DC A 1 8.473 -4.405 5.157 1.00 54.20 N ATOM 10 C2 DC A 1 8.434 -4.710 6.521 1.00 53.27 C ATOM 11 O2 DC A 1 8.124 -5.836 6.910 1.00 52.22 O ATOM 12 N3 DC A 1 8.720 -3.750 7.423 1.00 53.57 N ATOM 13 C4 DC A 1 9.059 -2.532 7.027 1.00 54.41 C ATOM 14 N4 DC A 1 9.326 -1.675 8.013 1.00 56.79 N ATOM 15 C5 DC A 1 9.132 -2.159 5.652 1.00 53.68 C ATOM 16 C6 DC A 1 8.839 -3.135 4.773 1.00 54.25 C ATOM 17 P DG A 2 6.063 -8.546 1.630 1.00 68.45 P ATOM 18 OP1 DG A 2 6.470 -9.946 1.346 1.00 68.77 O ATOM 19 OP2 DG A 2 5.454 -7.674 0.573 1.00 67.35 O ATOM 20 O5' DG A 2 5.059 -8.563 2.909 1.00 63.93 O ATOM 21 C5' DG A 2 4.589 -9.762 3.617 1.00 56.72 C ATOM 22 C4' DG A 2 3.472 -9.286 4.538 1.00 51.59 C ATOM 23 O4' DG A 2 3.938 -8.130 5.294 1.00 48.57 O ATOM 24 C3' DG A 2 2.179 -8.792 3.872 1.00 49.38 C ATOM 25 O3' DG A 2 1.138 -9.088 4.775 1.00 52.00 O ATOM 26 C2' DG A 2 2.405 -7.282 3.748 1.00 45.67 C ATOM 27 C1' DG A 2 3.025 -7.062 5.124 1.00 42.78 C ATOM 28 N9 DG A 2 3.683 -5.794 5.357 1.00 36.23 N ATOM 29 C8 DG A 2 3.971 -4.890 4.393 1.00 33.54 C ATOM 30 N7 DG A 2 4.547 -3.828 4.878 1.00 35.03 N ATOM 31 C5 DG A 2 4.643 -4.033 6.241 1.00 33.83 C ATOM 32 C6 DG A 2 5.183 -3.170 7.241 1.00 35.96 C ATOM 33 O6 DG A 2 5.716 -2.030 7.070 1.00 38.30 O ATOM 34 N1 DG A 2 5.072 -3.738 8.531 1.00 35.66 N ATOM 35 C2 DG A 2 4.509 -4.987 8.789 1.00 34.38 C ATOM 36 N2 DG A 2 4.506 -5.366 10.099 1.00 31.80 N ATOM 37 N3 DG A 2 4.004 -5.791 7.818 1.00 33.32 N ATOM 38 C4 DG A 2 4.107 -5.250 6.567 1.00 33.86 C ATOM 39 P DG A 3 0.777 -10.620 4.929 1.00 55.66 P ATOM 40 OP1 DG A 3 2.024 -11.334 4.528 1.00 55.76 O ATOM 41 OP2 DG A 3 -0.530 -10.795 4.256 1.00 53.76 O ATOM 42 O5' DG A 3 0.446 -11.038 6.434 1.00 53.49 O ATOM 43 C5' DG A 3 1.129 -10.567 7.548 1.00 53.07 C ATOM 44 C4' DG A 3 0.065 -10.077 8.524 1.00 52.93 C ATOM 45 O4' DG A 3 0.350 -8.679 8.763 1.00 49.95 O ATOM 46 C3' DG A 3 -1.400 -10.132 8.015 1.00 54.82 C ATOM 47 O3' DG A 3 -2.456 -10.192 9.043 1.00 58.47 O ATOM 48 C2' DG A 3 -1.517 -8.819 7.238 1.00 50.46 C ATOM 49 C1' DG A 3 -0.685 -7.922 8.160 1.00 47.02 C ATOM 50 N9 DG A 3 -0.154 -6.763 7.480 1.00 42.17 N ATOM 51 C8 DG A 3 -0.228 -6.566 6.124 1.00 43.28 C ATOM 52 N7 DG A 3 0.288 -5.435 5.723 1.00 42.09 N ATOM 53 C5 DG A 3 0.706 -4.849 6.914 1.00 38.94 C ATOM 54 C6 DG A 3 1.335 -3.601 7.081 1.00 37.36 C ATOM 55 O6 DG A 3 1.608 -2.858 6.138 1.00 39.16 O ATOM 56 N1 DG A 3 1.647 -3.289 8.412 1.00 32.68 N ATOM 57 C2 DG A 3 1.331 -4.155 9.447 1.00 31.82 C ATOM 58 N2 DG A 3 1.660 -3.739 10.679 1.00 27.50 N ATOM 59 N3 DG A 3 0.738 -5.348 9.296 1.00 32.48 N ATOM 60 C4 DG A 3 0.451 -5.639 8.008 1.00 37.75 C ATOM 61 P DG A 4 -2.508 -11.220 10.298 1.00 62.28 P ATOM 62 OP1 DG A 4 -1.279 -12.079 10.228 1.00 58.56 O ATOM 63 OP2 DG A 4 -3.931 -11.713 10.384 1.00 60.06 O ATOM 64 O5' DG A 4 -2.356 -10.348 11.629 1.00 60.99 O ATOM 65 C5' DG A 4 -1.906 -9.022 11.550 1.00 59.66 C ATOM 66 C4' DG A 4 -2.194 -8.331 12.869 1.00 58.78 C ATOM 67 O4' DG A 4 -1.809 -6.928 12.776 1.00 57.08 O ATOM 68 C3' DG A 4 -3.641 -8.332 13.381 1.00 59.05 C ATOM 69 O3' DG A 4 -3.635 -8.339 14.878 1.00 61.09 O ATOM 70 C2' DG A 4 -4.170 -7.106 12.645 1.00 57.17 C ATOM 71 C1' DG A 4 -2.956 -6.141 12.568 1.00 53.32 C ATOM 72 N9 DG A 4 -2.787 -5.533 11.258 1.00 46.20 N ATOM 73 C8 DG A 4 -3.113 -6.184 10.092 1.00 44.67 C ATOM 74 N7 DG A 4 -2.898 -5.464 9.030 1.00 42.15 N ATOM 75 C5 DG A 4 -2.401 -4.276 9.533 1.00 38.38 C ATOM 76 C6 DG A 4 -2.009 -3.176 8.789 1.00 35.96 C ATOM 77 O6 DG A 4 -2.001 -3.056 7.558 1.00 36.82 O ATOM 78 N1 DG A 4 -1.600 -2.159 9.595 1.00 33.35 N ATOM 79 C2 DG A 4 -1.542 -2.248 10.940 1.00 35.18 C ATOM 80 N2 DG A 4 -1.061 -1.113 11.432 1.00 36.32 N ATOM 81 N3 DG A 4 -1.896 -3.289 11.705 1.00 36.36 N ATOM 82 C4 DG A 4 -2.320 -4.280 10.905 1.00 39.98 C ATOM 83 P DC A 5 -4.338 -7.427 16.035 1.00 63.29 P ATOM 84 OP1 DC A 5 -4.114 -8.045 17.381 1.00 61.07 O ATOM 85 OP2 DC A 5 -5.705 -7.009 15.552 1.00 61.95 O ATOM 86 O5' DC A 5 -3.329 -6.203 16.189 1.00 61.72 O ATOM 87 C5' DC A 5 -3.651 -5.264 17.213 1.00 60.16 C ATOM 88 C4' DC A 5 -4.087 -3.913 16.644 1.00 57.08 C ATOM 89 O4' DC A 5 -4.064 -3.777 15.174 1.00 56.26 O ATOM 90 C3' DC A 5 -5.482 -3.513 17.034 1.00 53.92 C ATOM 91 O3' DC A 5 -5.289 -2.155 17.210 1.00 53.62 O ATOM 92 C2' DC A 5 -6.238 -3.748 15.742 1.00 52.37 C ATOM 93 C1' DC A 5 -5.248 -3.125 14.766 1.00 49.10 C ATOM 94 N1 DC A 5 -5.525 -3.328 13.312 1.00 42.94 N ATOM 95 C2 DC A 5 -5.171 -2.324 12.388 1.00 42.62 C ATOM 96 O2 DC A 5 -4.613 -1.289 12.767 1.00 42.99 O ATOM 97 N3 DC A 5 -5.424 -2.496 11.077 1.00 42.05 N ATOM 98 C4 DC A 5 -6.020 -3.628 10.714 1.00 43.30 C ATOM 99 N4 DC A 5 -6.276 -3.793 9.426 1.00 45.63 N ATOM 100 C5 DC A 5 -6.397 -4.657 11.627 1.00 42.51 C ATOM 101 C6 DC A 5 -6.129 -4.465 12.912 1.00 41.01 C ATOM 102 P DG A 6 -5.523 -1.663 18.694 1.00 55.49 P ATOM 103 OP1 DG A 6 -4.248 -1.688 19.491 1.00 57.35 O ATOM 104 OP2 DG A 6 -6.688 -2.443 19.189 1.00 53.51 O ATOM 105 O5' DG A 6 -5.818 -0.114 18.377 1.00 52.04 O ATOM 106 C5' DG A 6 -4.823 0.674 17.715 1.00 45.72 C ATOM 107 C4' DG A 6 -5.547 1.806 17.033 1.00 43.19 C ATOM 108 O4' DG A 6 -5.949 1.417 15.684 1.00 43.42 O ATOM 109 C3' DG A 6 -6.840 2.211 17.703 1.00 41.12 C ATOM 110 O3' DG A 6 -6.911 3.591 17.578 1.00 41.13 O ATOM 111 C2' DG A 6 -7.889 1.494 16.848 1.00 40.19 C ATOM 112 C1' DG A 6 -7.333 1.621 15.429 1.00 38.72 C ATOM 113 N9 DG A 6 -7.800 0.624 14.423 1.00 36.89 N ATOM 114 C8 DG A 6 -8.366 -0.624 14.695 1.00 38.86 C ATOM 115 N7 DG A 6 -8.704 -1.364 13.649 1.00 37.54 N ATOM 116 C5 DG A 6 -8.334 -0.565 12.578 1.00 34.60 C ATOM 117 C6 DG A 6 -8.469 -0.862 11.207 1.00 35.19 C ATOM 118 O6 DG A 6 -8.942 -1.903 10.657 1.00 37.41 O ATOM 119 N1 DG A 6 -7.982 0.199 10.453 1.00 33.62 N ATOM 120 C2 DG A 6 -7.459 1.340 10.996 1.00 31.93 C ATOM 121 N2 DG A 6 -7.042 2.229 10.121 1.00 32.23 N ATOM 122 N3 DG A 6 -7.345 1.643 12.263 1.00 31.83 N ATOM 123 C4 DG A 6 -7.793 0.641 13.020 1.00 34.36 C ATOM 124 P DC A 7 -5.960 4.484 18.509 1.00 45.04 P ATOM 125 OP1 DC A 7 -5.975 5.775 17.757 1.00 44.21 O ATOM 126 OP2 DC A 7 -4.680 3.815 18.908 1.00 42.99 O ATOM 127 O5' DC A 7 -6.719 4.626 19.922 1.00 43.53 O ATOM 128 C5' DC A 7 -7.867 5.487 20.054 1.00 42.70 C ATOM 129 C4' DC A 7 -8.701 5.472 21.333 1.00 40.92 C ATOM 130 O4' DC A 7 -8.900 4.155 21.886 1.00 40.77 O ATOM 131 C3' DC A 7 -8.148 6.298 22.453 1.00 41.74 C ATOM 132 O3' DC A 7 -9.176 7.127 22.868 1.00 46.99 O ATOM 133 C2' DC A 7 -7.761 5.327 23.567 1.00 40.19 C ATOM 134 C1' DC A 7 -8.493 4.062 23.236 1.00 38.20 C ATOM 135 N1 DC A 7 -7.793 2.753 23.427 1.00 35.78 N ATOM 136 C2 DC A 7 -7.644 2.244 24.693 1.00 37.93 C ATOM 137 O2 DC A 7 -8.029 2.924 25.630 1.00 43.00 O ATOM 138 N3 DC A 7 -7.085 1.048 24.904 1.00 36.69 N ATOM 139 C4 DC A 7 -6.704 0.362 23.856 1.00 35.70 C ATOM 140 N4 DC A 7 -6.153 -0.819 24.088 1.00 39.10 N ATOM 141 C5 DC A 7 -6.848 0.829 22.539 1.00 32.64 C ATOM 142 C6 DC A 7 -7.397 2.015 22.385 1.00 32.92 C ATOM 143 P DC A 8 -8.934 8.696 23.095 1.00 51.90 P ATOM 144 OP1 DC A 8 -10.047 9.173 24.005 1.00 51.33 O ATOM 145 OP2 DC A 8 -8.571 9.273 21.769 1.00 49.71 O ATOM 146 O5' DC A 8 -7.593 8.727 23.945 1.00 49.66 O ATOM 147 C5' DC A 8 -7.838 8.074 25.144 1.00 49.50 C ATOM 148 C4' DC A 8 -7.006 8.593 26.280 1.00 50.45 C ATOM 149 O4' DC A 8 -6.102 7.541 26.692 1.00 47.92 O ATOM 150 C3' DC A 8 -6.112 9.802 26.059 1.00 50.99 C ATOM 151 O3' DC A 8 -5.843 10.193 27.387 1.00 52.61 O ATOM 152 C2' DC A 8 -4.909 9.140 25.396 1.00 48.79 C ATOM 153 C1' DC A 8 -4.858 7.797 26.122 1.00 45.55 C ATOM 154 N1 DC A 8 -4.637 6.652 25.283 1.00 42.15 N ATOM 155 C2 DC A 8 -4.517 5.398 25.930 1.00 41.05 C ATOM 156 O2 DC A 8 -4.616 5.297 27.161 1.00 38.90 O ATOM 157 N3 DC A 8 -4.271 4.304 25.189 1.00 42.37 N ATOM 158 C4 DC A 8 -4.151 4.454 23.858 1.00 44.14 C ATOM 159 N4 DC A 8 -3.907 3.331 23.158 1.00 45.10 N ATOM 160 C5 DC A 8 -4.263 5.739 23.189 1.00 42.89 C ATOM 161 C6 DC A 8 -4.517 6.823 23.933 1.00 40.95 C ATOM 162 P DC A 9 -5.284 11.617 27.762 1.00 54.07 P ATOM 163 OP1 DC A 9 -6.316 12.179 28.654 1.00 54.05 O ATOM 164 OP2 DC A 9 -4.879 12.324 26.513 1.00 52.67 O ATOM 165 O5' DC A 9 -4.081 11.146 28.714 1.00 52.62 O ATOM 166 C5' DC A 9 -4.521 10.211 29.756 1.00 52.45 C ATOM 167 C4' DC A 9 -3.376 9.632 30.600 1.00 53.49 C ATOM 168 O4' DC A 9 -2.743 8.466 29.986 1.00 53.41 O ATOM 169 C3' DC A 9 -2.198 10.563 30.848 1.00 53.39 C ATOM 170 O3' DC A 9 -1.352 10.013 31.827 1.00 53.95 O ATOM 171 C2' DC A 9 -1.511 10.382 29.499 1.00 53.53 C ATOM 172 C1' DC A 9 -1.490 8.844 29.440 1.00 51.89 C ATOM 173 N1 DC A 9 -1.385 8.240 28.072 1.00 49.94 N ATOM 174 C2 DC A 9 -1.210 6.842 27.912 1.00 47.83 C ATOM 175 O2 DC A 9 -1.142 6.105 28.916 1.00 44.95 O ATOM 176 N3 DC A 9 -1.154 6.355 26.634 1.00 45.84 N ATOM 177 C4 DC A 9 -1.257 7.229 25.597 1.00 47.54 C ATOM 178 N4 DC A 9 -1.191 6.772 24.350 1.00 48.73 N ATOM 179 C5 DC A 9 -1.414 8.642 25.727 1.00 47.26 C ATOM 180 C6 DC A 9 -1.487 9.081 26.982 1.00 49.83 C ATOM 181 P DG A 10 -1.471 10.257 33.389 1.00 54.48 P ATOM 182 OP1 DG A 10 -2.747 9.671 33.822 1.00 55.17 O ATOM 183 OP2 DG A 10 -1.240 11.695 33.635 1.00 55.10 O ATOM 184 O5' DG A 10 -0.293 9.299 33.944 1.00 53.45 O ATOM 185 C5' DG A 10 -0.720 8.022 34.586 1.00 53.69 C ATOM 186 C4' DG A 10 0.343 6.914 34.721 1.00 54.78 C ATOM 187 O4' DG A 10 0.935 6.655 33.424 1.00 56.13 O ATOM 188 C3' DG A 10 1.622 7.208 35.525 1.00 55.39 C ATOM 189 O3' DG A 10 2.446 6.039 35.756 1.00 53.47 O ATOM 190 C2' DG A 10 2.321 8.192 34.582 1.00 54.18 C ATOM 191 C1' DG A 10 2.134 7.415 33.285 1.00 52.68 C ATOM 192 N9 DG A 10 2.037 8.174 32.037 1.00 49.90 N ATOM 193 C8 DG A 10 1.823 9.525 31.795 1.00 48.62 C ATOM 194 N7 DG A 10 1.836 9.772 30.503 1.00 47.15 N ATOM 195 C5 DG A 10 2.044 8.535 29.887 1.00 44.96 C ATOM 196 C6 DG A 10 2.121 8.171 28.521 1.00 44.78 C ATOM 197 O6 DG A 10 2.017 8.967 27.556 1.00 46.05 O ATOM 198 N1 DG A 10 2.344 6.770 28.346 1.00 39.99 N ATOM 199 C2 DG A 10 2.476 5.853 29.376 1.00 37.59 C ATOM 200 N2 DG A 10 2.674 4.574 29.084 1.00 31.05 N ATOM 201 N3 DG A 10 2.398 6.185 30.648 1.00 40.68 N ATOM 202 C4 DG A 10 2.180 7.532 30.818 1.00 45.72 C TER 203 DG A 10 ATOM 204 O5' DC B 11 -22.166 2.225 16.009 1.00 51.14 O ATOM 205 C5' DC B 11 -22.128 1.026 15.170 1.00 48.71 C ATOM 206 C4' DC B 11 -22.613 1.391 13.801 1.00 46.33 C ATOM 207 O4' DC B 11 -22.081 2.688 13.607 1.00 46.72 O ATOM 208 C3' DC B 11 -22.052 0.623 12.638 1.00 46.59 C ATOM 209 O3' DC B 11 -23.113 -0.013 12.186 1.00 49.76 O ATOM 210 C2' DC B 11 -21.665 1.632 11.565 1.00 46.77 C ATOM 211 C1' DC B 11 -22.185 2.885 12.236 1.00 47.36 C ATOM 212 N1 DC B 11 -21.578 4.192 12.043 1.00 48.06 N ATOM 213 C2 DC B 11 -21.325 4.652 10.760 1.00 49.88 C ATOM 214 O2 DC B 11 -21.581 3.875 9.797 1.00 50.99 O ATOM 215 N3 DC B 11 -20.806 5.923 10.641 1.00 49.43 N ATOM 216 C4 DC B 11 -20.585 6.683 11.739 1.00 49.05 C ATOM 217 N4 DC B 11 -20.089 7.937 11.612 1.00 49.45 N ATOM 218 C5 DC B 11 -20.858 6.183 13.040 1.00 47.51 C ATOM 219 C6 DC B 11 -21.349 4.956 13.135 1.00 47.29 C ATOM 220 P DG B 12 -23.290 -1.512 12.640 1.00 55.70 P ATOM 221 OP1 DG B 12 -24.692 -1.921 12.289 1.00 55.82 O ATOM 222 OP2 DG B 12 -22.785 -1.565 14.039 1.00 53.53 O ATOM 223 O5' DG B 12 -22.244 -2.307 11.695 1.00 55.36 O ATOM 224 C5' DG B 12 -22.210 -2.075 10.258 1.00 54.49 C ATOM 225 C4' DG B 12 -20.830 -2.126 9.576 1.00 52.62 C ATOM 226 O4' DG B 12 -20.151 -0.827 9.559 1.00 50.04 O ATOM 227 C3' DG B 12 -19.790 -3.100 10.122 1.00 53.07 C ATOM 228 O3' DG B 12 -19.007 -3.523 9.031 1.00 58.05 O ATOM 229 C2' DG B 12 -18.976 -2.197 11.015 1.00 48.23 C ATOM 230 C1' DG B 12 -18.870 -1.007 10.082 1.00 44.41 C ATOM 231 N9 DG B 12 -18.561 0.146 10.859 1.00 38.30 N ATOM 232 C8 DG B 12 -18.521 0.140 12.228 1.00 37.11 C ATOM 233 N7 DG B 12 -18.194 1.298 12.707 1.00 36.58 N ATOM 234 C5 DG B 12 -18.018 2.116 11.575 1.00 36.19 C ATOM 235 C6 DG B 12 -17.649 3.494 11.500 1.00 35.94 C ATOM 236 O6 DG B 12 -17.420 4.235 12.475 1.00 39.71 O ATOM 237 N1 DG B 12 -17.516 3.986 10.203 1.00 30.01 N ATOM 238 C2 DG B 12 -17.775 3.197 9.116 1.00 32.53 C ATOM 239 N2 DG B 12 -17.623 3.852 7.949 1.00 29.89 N ATOM 240 N3 DG B 12 -18.160 1.889 9.145 1.00 33.37 N ATOM 241 C4 DG B 12 -18.238 1.411 10.416 1.00 35.72 C ATOM 242 P DG B 13 -19.499 -4.826 8.252 1.00 62.49 P ATOM 243 OP1 DG B 13 -20.968 -4.656 7.976 1.00 62.17 O ATOM 244 OP2 DG B 13 -18.956 -5.956 9.068 1.00 61.59 O ATOM 245 O5' DG B 13 -18.683 -4.756 6.856 1.00 58.95 O ATOM 246 C5' DG B 13 -18.902 -3.664 5.914 1.00 54.33 C ATOM 247 C4' DG B 13 -17.620 -2.881 5.570 1.00 50.93 C ATOM 248 O4' DG B 13 -17.198 -1.979 6.631 1.00 47.35 O ATOM 249 C3' DG B 13 -16.357 -3.706 5.305 1.00 49.62 C ATOM 250 O3' DG B 13 -15.635 -3.120 4.268 1.00 51.39 O ATOM 251 C2' DG B 13 -15.555 -3.534 6.577 1.00 45.71 C ATOM 252 C1' DG B 13 -15.794 -2.063 6.804 1.00 42.56 C ATOM 253 N9 DG B 13 -15.559 -1.642 8.166 1.00 38.01 N ATOM 254 C8 DG B 13 -15.628 -2.453 9.270 1.00 37.31 C ATOM 255 N7 DG B 13 -15.393 -1.812 10.379 1.00 36.61 N ATOM 256 C5 DG B 13 -15.180 -0.490 9.987 1.00 33.95 C ATOM 257 C6 DG B 13 -14.915 0.652 10.791 1.00 32.86 C ATOM 258 O6 DG B 13 -14.790 0.727 12.035 1.00 33.02 O ATOM 259 N1 DG B 13 -14.786 1.790 10.016 1.00 30.42 N ATOM 260 C2 DG B 13 -14.877 1.802 8.654 1.00 30.78 C ATOM 261 N2 DG B 13 -14.690 3.025 8.140 1.00 32.92 N ATOM 262 N3 DG B 13 -15.136 0.754 7.871 1.00 30.03 N ATOM 263 C4 DG B 13 -15.277 -0.366 8.619 1.00 33.96 C ATOM 264 P DG B 14 -15.339 -3.874 2.885 1.00 53.46 P ATOM 265 OP1 DG B 14 -16.602 -4.294 2.232 1.00 51.90 O ATOM 266 OP2 DG B 14 -14.209 -4.825 3.131 1.00 55.16 O ATOM 267 O5' DG B 14 -14.838 -2.622 2.034 1.00 53.00 O ATOM 268 C5' DG B 14 -15.154 -1.278 2.418 1.00 53.27 C ATOM 269 C4' DG B 14 -13.972 -0.340 2.194 1.00 54.56 C ATOM 270 O4' DG B 14 -13.257 -0.085 3.440 1.00 55.47 O ATOM 271 C3' DG B 14 -12.842 -0.814 1.313 1.00 55.80 C ATOM 272 O3' DG B 14 -12.252 0.434 0.855 1.00 59.58 O ATOM 273 C2' DG B 14 -12.071 -1.724 2.321 1.00 53.38 C ATOM 274 C1' DG B 14 -12.052 -0.851 3.586 1.00 51.91 C ATOM 275 N9 DG B 14 -12.038 -1.417 4.973 1.00 48.47 N ATOM 276 C8 DG B 14 -12.210 -2.748 5.347 1.00 47.98 C ATOM 277 N7 DG B 14 -12.169 -2.938 6.652 1.00 45.31 N ATOM 278 C5 DG B 14 -11.971 -1.668 7.201 1.00 43.00 C ATOM 279 C6 DG B 14 -11.867 -1.276 8.573 1.00 41.67 C ATOM 280 O6 DG B 14 -11.919 -2.020 9.557 1.00 41.98 O ATOM 281 N1 DG B 14 -11.677 0.100 8.772 1.00 39.47 N ATOM 282 C2 DG B 14 -11.589 0.978 7.710 1.00 39.99 C ATOM 283 N2 DG B 14 -11.387 2.239 8.082 1.00 37.15 N ATOM 284 N3 DG B 14 -11.688 0.648 6.396 1.00 41.13 N ATOM 285 C4 DG B 14 -11.883 -0.707 6.195 1.00 44.27 C ATOM 286 P DC B 15 -10.823 0.602 0.087 1.00 63.92 P ATOM 287 OP1 DC B 15 -11.151 1.581 -0.971 1.00 64.11 O ATOM 288 OP2 DC B 15 -10.189 -0.716 -0.240 1.00 62.88 O ATOM 289 O5' DC B 15 -9.812 1.305 1.113 1.00 62.75 O ATOM 290 C5' DC B 15 -10.043 2.633 1.531 1.00 63.15 C ATOM 291 C4' DC B 15 -8.967 2.965 2.547 1.00 63.35 C ATOM 292 O4' DC B 15 -9.126 2.191 3.784 1.00 62.80 O ATOM 293 C3' DC B 15 -7.556 2.705 2.076 1.00 62.61 C ATOM 294 O3' DC B 15 -6.959 3.968 2.227 1.00 66.27 O ATOM 295 C2' DC B 15 -7.032 1.651 3.070 1.00 60.35 C ATOM 296 C1' DC B 15 -7.886 1.799 4.342 1.00 56.17 C ATOM 297 N1 DC B 15 -8.102 0.561 5.276 1.00 49.74 N ATOM 298 C2 DC B 15 -8.077 0.664 6.687 1.00 48.58 C ATOM 299 O2 DC B 15 -7.877 1.757 7.215 1.00 48.94 O ATOM 300 N3 DC B 15 -8.262 -0.446 7.476 1.00 46.68 N ATOM 301 C4 DC B 15 -8.486 -1.646 6.916 1.00 45.11 C ATOM 302 N4 DC B 15 -8.667 -2.705 7.717 1.00 45.57 N ATOM 303 C5 DC B 15 -8.533 -1.796 5.499 1.00 43.94 C ATOM 304 C6 DC B 15 -8.348 -0.690 4.750 1.00 46.38 C ATOM 305 P DG B 16 -5.557 4.292 1.535 1.00 70.80 P ATOM 306 OP1 DG B 16 -5.704 5.653 0.983 1.00 71.86 O ATOM 307 OP2 DG B 16 -5.210 3.121 0.681 1.00 70.64 O ATOM 308 O5' DG B 16 -4.479 4.397 2.721 1.00 69.57 O ATOM 309 C5' DG B 16 -4.547 5.463 3.656 1.00 69.11 C ATOM 310 C4' DG B 16 -3.792 5.055 4.908 1.00 69.73 C ATOM 311 O4' DG B 16 -4.352 3.885 5.584 1.00 68.87 O ATOM 312 C3' DG B 16 -2.353 4.641 4.664 1.00 71.63 C ATOM 313 O3' DG B 16 -1.551 5.091 5.784 1.00 75.15 O ATOM 314 C2' DG B 16 -2.478 3.118 4.595 1.00 69.03 C ATOM 315 C1' DG B 16 -3.309 2.966 5.851 1.00 65.85 C ATOM 316 N9 DG B 16 -3.817 1.620 5.991 1.00 61.19 N ATOM 317 C8 DG B 16 -4.139 0.829 4.925 1.00 58.13 C ATOM 318 N7 DG B 16 -4.574 -0.332 5.304 1.00 56.83 N ATOM 319 C5 DG B 16 -4.532 -0.301 6.686 1.00 55.51 C ATOM 320 C6 DG B 16 -4.899 -1.299 7.591 1.00 54.18 C ATOM 321 O6 DG B 16 -5.333 -2.393 7.278 1.00 55.14 O ATOM 322 N1 DG B 16 -4.733 -0.967 8.924 1.00 53.94 N ATOM 323 C2 DG B 16 -4.258 0.260 9.312 1.00 56.50 C ATOM 324 N2 DG B 16 -4.180 0.432 10.647 1.00 56.25 N ATOM 325 N3 DG B 16 -3.909 1.245 8.455 1.00 57.54 N ATOM 326 C4 DG B 16 -4.065 0.891 7.148 1.00 57.72 C ATOM 327 P DC B 17 -0.794 6.489 5.629 1.00 75.20 P ATOM 328 OP1 DC B 17 -1.883 7.543 5.586 1.00 73.67 O ATOM 329 OP2 DC B 17 0.207 6.177 4.545 1.00 73.39 O ATOM 330 O5' DC B 17 0.019 6.721 6.987 1.00 73.10 O ATOM 331 C5' DC B 17 -0.749 6.879 8.166 1.00 71.31 C ATOM 332 C4' DC B 17 -0.409 5.765 9.148 1.00 68.79 C ATOM 333 O4' DC B 17 -0.828 4.450 8.659 1.00 64.51 O ATOM 334 C3' DC B 17 1.078 5.718 9.487 1.00 68.43 C ATOM 335 O3' DC B 17 1.143 6.113 10.886 1.00 70.15 O ATOM 336 C2' DC B 17 1.454 4.281 9.043 1.00 66.09 C ATOM 337 C1' DC B 17 0.116 3.506 9.087 1.00 61.06 C ATOM 338 N1 DC B 17 -0.110 2.268 8.243 1.00 53.05 N ATOM 339 C2 DC B 17 -0.581 1.085 8.829 1.00 49.16 C ATOM 340 O2 DC B 17 -0.802 1.012 10.022 1.00 47.54 O ATOM 341 N3 DC B 17 -0.806 0.003 8.095 1.00 46.63 N ATOM 342 C4 DC B 17 -0.587 0.064 6.801 1.00 47.75 C ATOM 343 N4 DC B 17 -0.835 -1.042 6.094 1.00 47.43 N ATOM 344 C5 DC B 17 -0.112 1.246 6.162 1.00 48.98 C ATOM 345 C6 DC B 17 0.107 2.321 6.914 1.00 50.59 C ATOM 346 P DC B 18 2.368 5.833 11.892 1.00 73.97 P ATOM 347 OP1 DC B 18 1.958 6.351 13.230 1.00 71.06 O ATOM 348 OP2 DC B 18 3.631 6.258 11.182 1.00 72.87 O ATOM 349 O5' DC B 18 2.359 4.246 12.077 1.00 71.96 O ATOM 350 C5' DC B 18 1.326 3.610 12.824 1.00 73.39 C ATOM 351 C4' DC B 18 1.920 2.430 13.572 1.00 74.00 C ATOM 352 O4' DC B 18 1.967 1.245 12.723 1.00 74.00 O ATOM 353 C3' DC B 18 3.370 2.607 13.952 1.00 75.76 C ATOM 354 O3' DC B 18 3.691 1.607 14.869 1.00 78.83 O ATOM 355 C2' DC B 18 4.066 2.248 12.638 1.00 74.92 C ATOM 356 C1' DC B 18 3.290 0.984 12.232 1.00 71.16 C ATOM 357 N1 DC B 18 3.189 0.695 10.774 1.00 65.64 N ATOM 358 C2 DC B 18 2.489 -0.447 10.362 1.00 62.10 C ATOM 359 O2 DC B 18 1.989 -1.222 11.169 1.00 58.65 O ATOM 360 N3 DC B 18 2.374 -0.680 9.053 1.00 61.64 N ATOM 361 C4 DC B 18 2.932 0.181 8.204 1.00 63.76 C ATOM 362 N4 DC B 18 2.787 -0.134 6.930 1.00 65.21 N ATOM 363 C5 DC B 18 3.657 1.360 8.564 1.00 63.88 C ATOM 364 C6 DC B 18 3.749 1.567 9.870 1.00 65.41 C ATOM 365 P DC B 19 4.688 1.839 16.101 1.00 82.75 P ATOM 366 OP1 DC B 19 4.253 3.099 16.753 1.00 83.02 O ATOM 367 OP2 DC B 19 6.146 1.579 15.806 1.00 82.54 O ATOM 368 O5' DC B 19 4.129 0.626 16.976 1.00 80.45 O ATOM 369 C5' DC B 19 3.269 -0.334 16.365 1.00 76.15 C ATOM 370 C4' DC B 19 3.951 -1.679 16.424 1.00 72.13 C ATOM 371 O4' DC B 19 4.328 -2.112 15.102 1.00 71.43 O ATOM 372 C3' DC B 19 5.219 -1.741 17.240 1.00 70.50 C ATOM 373 O3' DC B 19 5.046 -3.018 17.788 1.00 69.45 O ATOM 374 C2' DC B 19 6.337 -1.539 16.199 1.00 69.74 C ATOM 375 C1' DC B 19 5.725 -2.198 14.957 1.00 69.32 C ATOM 376 N1 DC B 19 5.969 -1.644 13.573 1.00 66.90 N ATOM 377 C2 DC B 19 5.594 -2.448 12.459 1.00 64.35 C ATOM 378 O2 DC B 19 5.097 -3.591 12.626 1.00 58.69 O ATOM 379 N3 DC B 19 5.823 -1.920 11.208 1.00 64.93 N ATOM 380 C4 DC B 19 6.370 -0.679 11.058 1.00 65.86 C ATOM 381 N4 DC B 19 6.561 -0.205 9.818 1.00 64.54 N ATOM 382 C5 DC B 19 6.753 0.133 12.178 1.00 65.42 C ATOM 383 C6 DC B 19 6.523 -0.390 13.396 1.00 66.39 C ATOM 384 P DG B 20 6.178 -3.847 18.549 1.00 70.88 P ATOM 385 OP1 DG B 20 5.669 -3.912 19.938 1.00 71.09 O ATOM 386 OP2 DG B 20 7.564 -3.318 18.321 1.00 69.08 O ATOM 387 O5' DG B 20 6.000 -5.325 17.895 1.00 67.54 O ATOM 388 C5' DG B 20 5.166 -5.739 16.754 1.00 63.07 C ATOM 389 C4' DG B 20 5.576 -7.136 16.221 1.00 60.15 C ATOM 390 O4' DG B 20 6.183 -7.103 14.887 1.00 59.48 O ATOM 391 C3' DG B 20 6.653 -7.920 16.970 1.00 58.89 C ATOM 392 O3' DG B 20 6.412 -9.321 16.761 1.00 57.56 O ATOM 393 C2' DG B 20 7.987 -7.416 16.360 1.00 55.93 C ATOM 394 C1' DG B 20 7.630 -7.206 14.889 1.00 53.81 C ATOM 395 N9 DG B 20 8.097 -5.975 14.235 1.00 49.44 N ATOM 396 C8 DG B 20 8.504 -4.807 14.856 1.00 48.99 C ATOM 397 N7 DG B 20 8.805 -3.829 14.035 1.00 47.35 N ATOM 398 C5 DG B 20 8.571 -4.367 12.768 1.00 46.76 C ATOM 399 C6 DG B 20 8.728 -3.768 11.470 1.00 47.73 C ATOM 400 O6 DG B 20 9.123 -2.607 11.151 1.00 49.91 O ATOM 401 N1 DG B 20 8.361 -4.662 10.452 1.00 45.21 N ATOM 402 C2 DG B 20 7.923 -5.954 10.650 1.00 43.75 C ATOM 403 N2 DG B 20 7.625 -6.631 9.518 1.00 41.05 N ATOM 404 N3 DG B 20 7.792 -6.515 11.859 1.00 44.50 N ATOM 405 C4 DG B 20 8.127 -5.678 12.875 1.00 46.38 C TER 406 DG B 20 HETATM 407 O HOH A 11 -6.045 6.828 9.555 1.00 36.00 O HETATM 408 O HOH A 12 -1.065 4.541 31.321 1.00 28.42 O HETATM 409 O HOH A 13 2.161 13.402 28.070 1.00 52.22 O HETATM 410 O HOH A 14 -9.432 11.274 27.895 1.00 30.16 O HETATM 411 O HOH A 15 -5.336 3.761 11.800 1.00 31.73 O HETATM 412 O HOH A 16 11.343 2.663 5.059 1.00 37.38 O HETATM 413 O HOH A 17 8.941 -1.816 -1.575 1.00 36.45 O HETATM 414 O HOH A 18 0.672 2.761 36.359 1.00 39.52 O HETATM 415 O HOH B 4 -3.700 -3.795 4.293 1.00 40.53 O HETATM 416 O HOH B 9 -16.714 -7.597 6.280 1.00 39.48 O MASTER 333 0 0 0 0 0 0 6 414 2 0 2 END