HEADER DNA 12-NOV-11 3UM4 TITLE X-RAY DIFFRACTION STUDIES OF RING CRYSTALS OBTAINED FOR D(CACGCG) TITLE 2 .D(CGCGTG): STAGE (I) HEXAGONAL PLATES COMPND MOL_ID: 1; COMPND 2 MOLECULE: 6-MER DNA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: CHEMICALLY SYNTHESIZED BY M/S MICROSYNTH KEYWDS Z-TYPE DNA DOUBLE HELIX, RING CRYSTAL, CRYSTAL MORPHOLOGY, DNA EXPDTA X-RAY DIFFRACTION AUTHOR P.K.MANDAL,S.VENKADESH,N.GAUTHAM REVDAT 3 03-APR-24 3UM4 1 REMARK REVDAT 2 20-MAR-24 3UM4 1 REMARK REVDAT 1 25-JUL-12 3UM4 0 JRNL AUTH P.K.MANDAL,A.R.CHANDRASEKARAN,B.R.MADHANAGOPAL,S.VENKADESH, JRNL AUTH 2 N.GAUTHAM JRNL TITL RING CRYSTALS OF OLIGONUCLEOTIDES: GROWTH STAGES AND X-RAY JRNL TITL 2 DIFFRACTION STUDIES JRNL REF J.CRYST.GROWTH V. 354 20 2012 JRNL REFN ISSN 0022-0248 JRNL DOI 10.1016/J.JCRYSGRO.2012.05.029 REMARK 2 REMARK 2 RESOLUTION. 2.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 3 NUMBER OF REFLECTIONS : 316 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 16 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.82 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.89 REMARK 3 REFLECTION IN BIN (WORKING SET) : 31 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.3900 REMARK 3 BIN FREE R VALUE SET COUNT : 2 REMARK 3 BIN FREE R VALUE : 0.1550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 165 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 3 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09000 REMARK 3 B22 (A**2) : -0.09000 REMARK 3 B33 (A**2) : 0.14000 REMARK 3 B12 (A**2) : -0.05000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.564 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.417 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.213 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 183 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 280 ; 2.391 ; 3.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): 88 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 79 ; 0.299 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 87 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 3 ; 0.277 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 22 ; 0.347 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.511 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE DNA OLIGONUCLEOTIDE HAS SIX BASE REMARK 3 PAIRS (D(CACGCG).D(CGCGTG)) AND FORMS THE Z-TYPE DOUBLE HELICAL REMARK 3 STRUCTURE. THE STRUCTURE HAS STATISTICAL DIS-ORDER AND THE REMARK 3 ASYMMETRIC UNIT CONTAINS A TETRAMERIC DUPLEX WHICH COULD STAND REMARK 3 FOR EITHER CPGPCPG/CPGPCPG OR CPAPCPG/CPGPTPG OR CPGPCPA/ REMARK 3 TPGPCPG. DUE TO DISORDER, THE TETRANUCLEOTIDE WAS CONSTRUCTED AS REMARK 3 TPGPTPG/TPGPTPG IN WHICH THE C5 METHYL GROUP OF THYMINE WAS REMARK 3 ASSIGNED OCCUPANCY OF 1/6 AND N2 OF GUANINE WAS ASSIGNED REMARK 3 OCCUPANCY OF 5/6. REMARK 4 REMARK 4 3UM4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000068925. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOMAR REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 343 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.810 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 3.220 REMARK 200 R MERGE (I) : 0.06570 REMARK 200 R SYM (I) : 0.04590 REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.93 REMARK 200 R MERGE FOR SHELL (I) : 0.34860 REMARK 200 R SYM FOR SHELL (I) : 0.25350 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: Z-TYPE DNA TETRANUCLEOTIDE BUILT USING INSIGHTII REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 21.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1MM DNA, 75MM SODIUM CACODYLATE REMARK 280 TRIHYDRATE BUFFER (PH 7.0), 0.5MM COBALT HEXAMMINE CHLORIDE, REMARK 280 0.75MM SPERMINE, EQUILIBRATED AGAINST 50% METHYL PENTANE DIOL REMARK 280 (MPD), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.33000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.16500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 1720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT A 1 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 DT A 1 N1 - C2 - N3 ANGL. DEV. = 4.2 DEGREES REMARK 500 DT A 3 O4' - C1' - N1 ANGL. DEV. = 3.7 DEGREES REMARK 500 DT B 5 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DT B 5 N3 - C2 - O2 ANGL. DEV. = -3.9 DEGREES REMARK 500 DG B 8 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG B 8 C5 - C6 - O6 ANGL. DEV. = -4.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ULM RELATED DB: PDB REMARK 900 THE 3ULM STRUCTURE IS OF STAGE (II) IN THE RING CRYSTAL FORMATION REMARK 900 SEEN IN OLIGONUCLEOTIDE. REMARK 900 RELATED ID: 3ULN RELATED DB: PDB REMARK 900 THE 3ULN STRUCTURE IS OF STAGE (III) IN THE RING CRYSTAL FORMATION REMARK 900 SEEN IN OLIGONUCLEOTIDE. REMARK 900 RELATED ID: 3ULO RELATED DB: PDB REMARK 900 THE 3ULO STRUCTURE IS OF STAGE (IV) IN THE RING CRYSTAL FORMATION REMARK 900 SEEN IN OLIGONUCLEOTIDE. REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE ACTUAL DNA SEQUENCE FOR THE THIS STUDY IS D(CACGCG).(CGCGTG) DBREF 3UM4 A 1 4 PDB 3UM4 3UM4 1 4 DBREF 3UM4 B 5 8 PDB 3UM4 3UM4 5 8 SEQRES 1 A 4 DT DG DT DG SEQRES 1 B 4 DT DG DT DG FORMUL 3 HOH *3(H2 O) CRYST1 17.693 17.693 42.495 90.00 90.00 120.00 P 32 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.056520 0.032632 0.000000 0.00000 SCALE2 0.000000 0.065263 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023532 0.00000 ATOM 1 P DT A 1 1.005 -7.578 -1.349 0.50 32.74 P ATOM 2 OP1 DT A 1 1.802 -6.521 -2.027 0.50 30.04 O ATOM 3 OP2 DT A 1 -0.180 -8.135 -2.062 0.50 33.62 O ATOM 4 O5' DT A 1 1.875 -8.849 -0.852 1.00 31.63 O ATOM 5 C5' DT A 1 3.102 -8.712 -0.171 1.00 30.01 C ATOM 6 C4' DT A 1 4.281 -8.555 -1.123 1.00 28.87 C ATOM 7 O4' DT A 1 4.281 -7.292 -1.852 1.00 29.04 O ATOM 8 C3' DT A 1 5.604 -8.563 -0.387 1.00 28.65 C ATOM 9 O3' DT A 1 6.482 -9.263 -1.210 1.00 31.40 O ATOM 10 C2' DT A 1 5.955 -7.086 -0.224 1.00 27.35 C ATOM 11 C1' DT A 1 5.445 -6.512 -1.522 1.00 25.53 C ATOM 12 N1 DT A 1 5.184 -5.020 -1.576 1.00 24.61 N ATOM 13 C2 DT A 1 6.205 -4.290 -2.096 1.00 24.66 C ATOM 14 O2 DT A 1 7.222 -4.806 -2.429 1.00 28.82 O ATOM 15 N3 DT A 1 6.049 -2.948 -2.227 1.00 25.79 N ATOM 16 C4 DT A 1 4.938 -2.221 -1.857 1.00 28.15 C ATOM 17 O4 DT A 1 4.953 -0.979 -2.020 1.00 27.98 O ATOM 18 C5 DT A 1 3.838 -3.045 -1.299 1.00 26.83 C ATOM 19 C7 DT A 1 2.546 -2.408 -0.876 0.17 26.19 C ATOM 20 C6 DT A 1 4.008 -4.390 -1.191 1.00 25.24 C ATOM 21 P DG A 2 7.585 -10.241 -0.580 1.00 33.40 P ATOM 22 OP1 DG A 2 7.039 -10.615 0.757 1.00 34.83 O ATOM 23 OP2 DG A 2 8.935 -9.617 -0.649 1.00 34.42 O ATOM 24 O5' DG A 2 7.588 -11.461 -1.616 1.00 28.77 O ATOM 25 C5' DG A 2 7.927 -11.258 -2.970 1.00 26.97 C ATOM 26 C4' DG A 2 6.939 -12.076 -3.757 1.00 26.39 C ATOM 27 O4' DG A 2 5.677 -11.405 -3.665 1.00 24.00 O ATOM 28 C3' DG A 2 7.243 -12.179 -5.235 1.00 27.41 C ATOM 29 O3' DG A 2 7.960 -13.392 -5.468 1.00 28.59 O ATOM 30 C2' DG A 2 5.877 -12.118 -5.922 1.00 27.63 C ATOM 31 C1' DG A 2 4.901 -11.743 -4.804 1.00 27.61 C ATOM 32 N9 DG A 2 3.965 -10.630 -5.087 1.00 29.57 N ATOM 33 C8 DG A 2 2.616 -10.684 -5.374 1.00 29.76 C ATOM 34 N7 DG A 2 2.062 -9.506 -5.569 1.00 30.53 N ATOM 35 C5 DG A 2 3.090 -8.590 -5.384 1.00 30.62 C ATOM 36 C6 DG A 2 3.114 -7.161 -5.456 1.00 31.44 C ATOM 37 O6 DG A 2 2.191 -6.367 -5.711 1.00 33.39 O ATOM 38 N1 DG A 2 4.392 -6.645 -5.208 1.00 31.26 N ATOM 39 C2 DG A 2 5.518 -7.424 -4.932 1.00 32.30 C ATOM 40 N2 DG A 2 6.706 -6.828 -4.708 0.83 29.24 N ATOM 41 N3 DG A 2 5.495 -8.754 -4.859 1.00 33.53 N ATOM 42 C4 DG A 2 4.259 -9.275 -5.090 1.00 31.49 C ATOM 43 P DT A 3 8.437 -13.768 -6.966 0.50 29.66 P ATOM 44 OP1 DT A 3 7.275 -14.354 -7.701 0.50 28.31 O ATOM 45 OP2 DT A 3 9.717 -14.517 -6.820 0.50 27.03 O ATOM 46 O5' DT A 3 8.726 -12.341 -7.643 1.00 29.62 O ATOM 47 C5' DT A 3 9.980 -11.628 -7.351 1.00 32.98 C ATOM 48 C4' DT A 3 10.140 -10.274 -8.079 1.00 33.34 C ATOM 49 O4' DT A 3 8.942 -9.834 -8.838 1.00 31.09 O ATOM 50 C3' DT A 3 10.489 -9.093 -7.141 1.00 33.40 C ATOM 51 O3' DT A 3 11.391 -8.206 -7.808 1.00 33.50 O ATOM 52 C2' DT A 3 9.128 -8.419 -6.963 1.00 30.61 C ATOM 53 C1' DT A 3 8.654 -8.506 -8.414 1.00 25.66 C ATOM 54 N1 DT A 3 7.270 -8.166 -8.607 1.00 21.49 N ATOM 55 C2 DT A 3 7.058 -6.851 -8.795 1.00 22.80 C ATOM 56 O2 DT A 3 7.979 -6.051 -8.780 1.00 26.00 O ATOM 57 N3 DT A 3 5.758 -6.501 -8.991 1.00 21.98 N ATOM 58 C4 DT A 3 4.677 -7.330 -9.001 1.00 21.73 C ATOM 59 O4 DT A 3 3.561 -6.863 -9.168 1.00 21.83 O ATOM 60 C5 DT A 3 4.965 -8.727 -8.787 1.00 21.34 C ATOM 61 C7 DT A 3 3.872 -9.757 -8.777 0.17 21.46 C ATOM 62 C6 DT A 3 6.243 -9.069 -8.601 1.00 21.98 C ATOM 63 P DG A 4 12.887 -7.993 -7.331 1.00 35.39 P ATOM 64 OP1 DG A 4 12.994 -8.274 -5.877 1.00 36.91 O ATOM 65 OP2 DG A 4 13.286 -6.634 -7.772 1.00 37.16 O ATOM 66 O5' DG A 4 13.649 -9.150 -8.170 1.00 31.97 O ATOM 67 C5' DG A 4 14.036 -8.976 -9.590 1.00 29.06 C ATOM 68 C4' DG A 4 13.944 -10.313 -10.335 1.00 27.10 C ATOM 69 O4' DG A 4 12.604 -10.845 -10.148 1.00 25.64 O ATOM 70 C3' DG A 4 14.090 -10.254 -11.855 1.00 25.82 C ATOM 71 O3' DG A 4 15.453 -10.436 -12.284 1.00 26.41 O ATOM 72 C2' DG A 4 13.201 -11.382 -12.363 1.00 22.91 C ATOM 73 C1' DG A 4 12.320 -11.746 -11.188 1.00 22.87 C ATOM 74 N9 DG A 4 10.909 -11.623 -11.512 1.00 26.38 N ATOM 75 C8 DG A 4 10.007 -12.655 -11.601 1.00 29.18 C ATOM 76 N7 DG A 4 8.784 -12.291 -11.907 1.00 28.77 N ATOM 77 C5 DG A 4 8.876 -10.922 -12.025 1.00 25.08 C ATOM 78 C6 DG A 4 7.863 -10.019 -12.354 1.00 23.96 C ATOM 79 O6 DG A 4 6.658 -10.241 -12.610 1.00 21.58 O ATOM 80 N1 DG A 4 8.402 -8.737 -12.372 1.00 24.44 N ATOM 81 C2 DG A 4 9.704 -8.370 -12.112 1.00 23.98 C ATOM 82 N2 DG A 4 10.001 -7.067 -12.161 0.83 22.23 N ATOM 83 N3 DG A 4 10.652 -9.220 -11.801 1.00 25.40 N ATOM 84 C4 DG A 4 10.166 -10.484 -11.782 1.00 26.13 C TER 85 DG A 4 ATOM 86 O5' DT B 5 1.935 -1.190 -13.244 1.00 27.67 O ATOM 87 C5' DT B 5 3.325 -1.198 -13.661 1.00 27.53 C ATOM 88 C4' DT B 5 4.302 -1.186 -12.472 1.00 26.04 C ATOM 89 O4' DT B 5 4.398 -2.494 -11.809 1.00 24.17 O ATOM 90 C3' DT B 5 5.729 -0.843 -12.862 1.00 25.09 C ATOM 91 O3' DT B 5 6.418 -0.193 -11.795 1.00 26.00 O ATOM 92 C2' DT B 5 6.276 -2.240 -13.155 1.00 24.84 C ATOM 93 C1' DT B 5 5.702 -3.036 -11.986 1.00 21.95 C ATOM 94 N1 DT B 5 5.651 -4.535 -12.167 1.00 19.57 N ATOM 95 C2 DT B 5 6.761 -5.300 -12.427 1.00 18.34 C ATOM 96 O2 DT B 5 7.897 -4.906 -12.540 1.00 20.15 O ATOM 97 N3 DT B 5 6.525 -6.620 -12.548 1.00 17.36 N ATOM 98 C4 DT B 5 5.347 -7.301 -12.430 1.00 18.18 C ATOM 99 O4 DT B 5 5.262 -8.515 -12.555 1.00 19.44 O ATOM 100 C5 DT B 5 4.219 -6.483 -12.164 1.00 18.53 C ATOM 101 C7 DT B 5 2.857 -7.104 -12.026 0.17 18.85 C ATOM 102 C6 DT B 5 4.436 -5.166 -12.038 1.00 20.48 C ATOM 103 P DG B 6 7.726 0.715 -12.093 1.00 29.17 P ATOM 104 OP1 DG B 6 7.336 1.763 -13.079 1.00 27.98 O ATOM 105 OP2 DG B 6 8.849 -0.200 -12.431 1.00 28.19 O ATOM 106 O5' DG B 6 8.197 1.564 -10.764 1.00 29.07 O ATOM 107 C5' DG B 6 7.911 1.119 -9.436 1.00 29.40 C ATOM 108 C4' DG B 6 6.812 1.973 -8.834 1.00 29.07 C ATOM 109 O4' DG B 6 5.591 1.524 -9.467 1.00 28.60 O ATOM 110 C3' DG B 6 6.598 1.724 -7.347 1.00 30.61 C ATOM 111 O3' DG B 6 7.330 2.695 -6.529 1.00 28.98 O ATOM 112 C2' DG B 6 5.062 1.788 -7.190 1.00 31.53 C ATOM 113 C1' DG B 6 4.493 1.536 -8.584 1.00 30.81 C ATOM 114 N9 DG B 6 3.760 0.270 -8.685 1.00 33.17 N ATOM 115 C8 DG B 6 2.395 0.067 -8.830 1.00 34.66 C ATOM 116 N7 DG B 6 2.055 -1.205 -8.859 1.00 35.38 N ATOM 117 C5 DG B 6 3.262 -1.902 -8.733 1.00 34.40 C ATOM 118 C6 DG B 6 3.563 -3.299 -8.696 1.00 33.51 C ATOM 119 O6 DG B 6 2.828 -4.290 -8.777 1.00 34.14 O ATOM 120 N1 DG B 6 4.919 -3.541 -8.545 1.00 33.80 N ATOM 121 C2 DG B 6 5.885 -2.560 -8.424 1.00 35.57 C ATOM 122 N2 DG B 6 7.159 -2.964 -8.273 0.83 34.77 N ATOM 123 N3 DG B 6 5.631 -1.252 -8.463 1.00 35.72 N ATOM 124 C4 DG B 6 4.308 -0.996 -8.625 1.00 34.33 C ATOM 125 P DT B 7 6.989 2.974 -4.966 0.50 28.02 P ATOM 126 OP1 DT B 7 5.712 2.353 -4.536 0.50 27.29 O ATOM 127 OP2 DT B 7 7.195 4.429 -4.778 0.50 29.22 O ATOM 128 O5' DT B 7 8.160 2.235 -4.177 1.00 27.24 O ATOM 129 C5' DT B 7 9.209 1.644 -4.936 1.00 28.32 C ATOM 130 C4' DT B 7 9.332 0.152 -4.638 1.00 27.80 C ATOM 131 O4' DT B 7 8.038 -0.507 -4.598 1.00 28.20 O ATOM 132 C3' DT B 7 10.201 -0.677 -5.576 1.00 27.23 C ATOM 133 O3' DT B 7 11.238 -1.140 -4.714 1.00 28.67 O ATOM 134 C2' DT B 7 9.250 -1.766 -6.114 1.00 25.77 C ATOM 135 C1' DT B 7 8.234 -1.854 -4.975 1.00 25.26 C ATOM 136 N1 DT B 7 6.884 -2.516 -5.140 1.00 23.71 N ATOM 137 C2 DT B 7 6.831 -3.878 -5.228 1.00 23.53 C ATOM 138 O2 DT B 7 7.818 -4.601 -5.217 1.00 20.36 O ATOM 139 N3 DT B 7 5.550 -4.383 -5.340 1.00 26.13 N ATOM 140 C4 DT B 7 4.315 -3.735 -5.364 1.00 26.25 C ATOM 141 O4 DT B 7 3.249 -4.385 -5.487 1.00 21.99 O ATOM 142 C5 DT B 7 4.455 -2.275 -5.254 1.00 25.27 C ATOM 143 C7 DT B 7 3.265 -1.356 -5.255 0.17 24.87 C ATOM 144 C6 DT B 7 5.705 -1.771 -5.145 1.00 24.79 C ATOM 145 P DG B 8 12.752 -1.135 -5.200 1.00 28.82 P ATOM 146 OP1 DG B 8 12.858 0.139 -5.957 1.00 29.69 O ATOM 147 OP2 DG B 8 13.049 -2.429 -5.873 1.00 27.08 O ATOM 148 O5' DG B 8 13.663 -1.027 -3.867 1.00 26.18 O ATOM 149 C5' DG B 8 13.113 -0.877 -2.586 1.00 25.90 C ATOM 150 C4' DG B 8 13.296 0.510 -2.002 1.00 24.60 C ATOM 151 O4' DG B 8 12.117 1.239 -2.357 1.00 25.21 O ATOM 152 C3' DG B 8 13.234 0.509 -0.474 1.00 26.28 C ATOM 153 O3' DG B 8 14.542 0.642 0.101 1.00 28.95 O ATOM 154 C2' DG B 8 12.360 1.694 -0.053 1.00 25.20 C ATOM 155 C1' DG B 8 11.848 2.212 -1.380 1.00 26.04 C ATOM 156 N9 DG B 8 10.427 2.443 -1.265 1.00 27.08 N ATOM 157 C8 DG B 8 9.823 3.636 -0.959 1.00 30.04 C ATOM 158 N7 DG B 8 8.522 3.571 -0.901 1.00 32.19 N ATOM 159 C5 DG B 8 8.275 2.239 -1.177 1.00 31.67 C ATOM 160 C6 DG B 8 7.037 1.580 -1.255 1.00 35.47 C ATOM 161 O6 DG B 8 5.943 2.138 -1.061 1.00 41.38 O ATOM 162 N1 DG B 8 7.157 0.209 -1.586 1.00 34.31 N ATOM 163 C2 DG B 8 8.396 -0.411 -1.789 1.00 33.21 C ATOM 164 N2 DG B 8 8.412 -1.729 -2.080 0.83 31.33 N ATOM 165 N3 DG B 8 9.574 0.226 -1.715 1.00 30.43 N ATOM 166 C4 DG B 8 9.428 1.533 -1.401 1.00 28.40 C TER 167 DG B 8 HETATM 168 O HOH A 101 12.178 -12.332 -0.594 1.00 34.31 O HETATM 169 O HOH A 102 5.742 -14.777 -11.944 1.00 2.00 O HETATM 170 O HOH B 101 15.333 -3.484 -8.083 1.00 30.80 O MASTER 283 0 0 0 0 0 0 6 168 2 0 2 END