HEADER DNA 12-JAN-12 4D9X TITLE THE CRYSTAL STRUCTURE OF COPTISINE BOUND TO DNA D(CGTACG) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*CP*GP*TP*AP*CP*G)-3'); COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS DRUG-DNA COMPLEX, DOUBLE HELIX, DNA EXPDTA X-RAY DIFFRACTION AUTHOR M.FERRARONI,C.BAZZICALUPI,P.GRATTERI,A.R.BILIA REVDAT 2 13-SEP-23 4D9X 1 REMARK LINK REVDAT 1 23-JAN-13 4D9X 0 JRNL AUTH M.FERRARONI,C.BAZZICALUPI,P.GRATTERI,A.R.BILIA JRNL TITL THE CRYSTAL STRUCTURE OF COPTISINE BOUND TO DNA D(CGTACG) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 2641 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.266 REMARK 3 R VALUE (WORKING SET) : 0.261 REMARK 3 FREE R VALUE : 0.307 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.600 REMARK 3 FREE R VALUE TEST SET COUNT : 254 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.44 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 175 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.4880 REMARK 3 BIN FREE R VALUE SET COUNT : 15 REMARK 3 BIN FREE R VALUE : 0.7340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 450 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 15 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.148 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.073 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.899 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.882 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 531 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 814 ; 1.955 ; 3.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): 258 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.789 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : H+K,-K,-L REMARK 3 TWIN FRACTION : 0.211 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: USED TWIN REFINEMENT TWIN FRACTION REMARK 3 0.204 REMARK 4 REMARK 4 4D9X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000070066. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-AUG-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : OXFORD DIFFRACTION ENHANCE ULTRA REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.542 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : OXFORD ONYX CCD REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : OXFORD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2642 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.440 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.4800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.61100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.010 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3NP6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPD, MGCL2, KCL, SPERMINE, PH 6.0, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.88667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.44333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 39.44333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 78.88667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 2700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 2720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DC A 1 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DC A 1 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC A 1 C6 REMARK 470 DC C 1 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DC C 1 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC C 1 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT A 3 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC B 11 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DT C 3 O4' - C1' - N1 ANGL. DEV. = 4.1 DEGREES REMARK 500 DA C 4 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DC C 5 C1' - O4' - C4' ANGL. DEV. = -6.8 DEGREES REMARK 500 DC C 5 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DC D 7 O4' - C1' - N1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DG D 8 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DA D 10 N1 - C2 - N3 ANGL. DEV. = -3.3 DEGREES REMARK 500 DC D 11 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC D 11 C3' - O3' - P ANGL. DEV. = 7.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG B 12 OP1 REMARK 620 2 DG D 12 OP1 65.5 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KPT C 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NP6 RELATED DB: PDB REMARK 900 THE SAME SEQUENCE COMPLEXED WITH BERBERINE REMARK 900 RELATED ID: 3NX5 RELATED DB: PDB REMARK 900 THE SAME SEQUENCE COMPLEXED WITH SANGUINARINE REMARK 900 RELATED ID: 4D9Y RELATED DB: PDB REMARK 900 THE SAME SEQUENCE COMPLEXED WITH CHELERYTHRINE DBREF 4D9X A 1 6 PDB 4D9X 4D9X 1 6 DBREF 4D9X B 7 12 PDB 4D9X 4D9X 7 12 DBREF 4D9X C 1 6 PDB 4D9X 4D9X 1 6 DBREF 4D9X D 7 12 PDB 4D9X 4D9X 7 12 SEQRES 1 A 6 DC DG DT DA DC DG SEQRES 1 B 6 DC DG DT DA DC DG SEQRES 1 C 6 DC DG DT DA DC DG SEQRES 1 D 6 DC DG DT DA DC DG HET CA B 101 1 HET KPT C 101 24 HETNAM CA CALCIUM ION HETNAM KPT 6,7-DIHYDRO[1,3]DIOXOLO[4,5-G][1,3]DIOXOLO[7, HETNAM 2 KPT 8]ISOQUINO[3,2-A]ISOQUINOLIN-5-IUM HETSYN KPT COPTISINE FORMUL 5 CA CA 2+ FORMUL 6 KPT C19 H14 N O4 1+ FORMUL 7 HOH *15(H2 O) LINK OP1 DG B 12 CA CA B 101 1555 1555 2.20 LINK CA CA B 101 OP1 DG D 12 1555 1555 3.06 SITE 1 AC1 2 DG B 12 DG D 12 SITE 1 AC2 8 DC A 5 DG A 6 DC B 7 DG B 8 SITE 2 AC2 8 DC C 5 DG C 6 DC D 7 DG D 8 CRYST1 30.282 30.282 118.330 90.00 90.00 120.00 P 32 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.033023 0.019066 0.000000 0.00000 SCALE2 0.000000 0.038132 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008451 0.00000 ATOM 1 O3' DC A 1 12.277 1.754 2.542 1.00 32.44 O ATOM 2 P DG A 2 10.787 2.317 2.735 1.00 32.83 P ATOM 3 OP1 DG A 2 9.815 1.275 2.302 1.00 32.46 O ATOM 4 OP2 DG A 2 10.752 3.673 2.137 1.00 32.44 O ATOM 5 O5' DG A 2 10.682 2.431 4.326 1.00 31.13 O ATOM 6 C5' DG A 2 10.338 3.645 4.978 1.00 28.38 C ATOM 7 C4' DG A 2 10.832 3.565 6.408 1.00 25.12 C ATOM 8 O4' DG A 2 10.887 2.181 6.830 1.00 22.36 O ATOM 9 C3' DG A 2 12.226 4.127 6.600 1.00 24.64 C ATOM 10 O3' DG A 2 12.192 4.969 7.738 1.00 26.45 O ATOM 11 C2' DG A 2 13.110 2.892 6.786 1.00 23.30 C ATOM 12 C1' DG A 2 12.138 1.907 7.423 1.00 21.30 C ATOM 13 N9 DG A 2 12.443 0.495 7.206 1.00 16.88 N ATOM 14 C8 DG A 2 12.423 -0.179 6.014 1.00 16.64 C ATOM 15 N7 DG A 2 12.730 -1.443 6.123 1.00 16.40 N ATOM 16 C5 DG A 2 12.954 -1.627 7.479 1.00 14.74 C ATOM 17 C6 DG A 2 13.319 -2.796 8.199 1.00 13.17 C ATOM 18 O6 DG A 2 13.517 -3.942 7.755 1.00 10.96 O ATOM 19 N1 DG A 2 13.443 -2.548 9.572 1.00 9.99 N ATOM 20 C2 DG A 2 13.254 -1.333 10.168 1.00 11.14 C ATOM 21 N2 DG A 2 13.431 -1.300 11.495 1.00 10.87 N ATOM 22 N3 DG A 2 12.910 -0.224 9.511 1.00 14.70 N ATOM 23 C4 DG A 2 12.776 -0.441 8.165 1.00 16.20 C ATOM 24 P DT A 3 13.108 6.276 7.801 1.00 28.20 P ATOM 25 OP1 DT A 3 12.276 7.421 8.240 1.00 28.56 O ATOM 26 OP2 DT A 3 13.830 6.364 6.508 1.00 26.93 O ATOM 27 O5' DT A 3 14.151 5.923 8.981 1.00 29.31 O ATOM 28 C5' DT A 3 13.767 5.101 10.098 1.00 29.44 C ATOM 29 C4' DT A 3 14.917 4.363 10.796 1.00 29.52 C ATOM 30 O4' DT A 3 14.958 2.965 10.397 1.00 29.33 O ATOM 31 C3' DT A 3 16.349 4.871 10.625 1.00 30.46 C ATOM 32 O3' DT A 3 16.980 4.766 11.892 1.00 31.74 O ATOM 33 C2' DT A 3 16.972 3.861 9.664 1.00 29.52 C ATOM 34 C1' DT A 3 16.299 2.586 10.162 1.00 28.85 C ATOM 35 N1 DT A 3 16.349 1.395 9.243 1.00 28.40 N ATOM 36 C2 DT A 3 16.564 0.130 9.776 1.00 29.13 C ATOM 37 O2 DT A 3 16.722 -0.095 10.964 1.00 28.88 O ATOM 38 N3 DT A 3 16.591 -0.895 8.858 1.00 28.67 N ATOM 39 C4 DT A 3 16.436 -0.796 7.483 1.00 28.47 C ATOM 40 O4 DT A 3 16.481 -1.796 6.760 1.00 28.89 O ATOM 41 C5 DT A 3 16.214 0.549 6.987 1.00 28.32 C ATOM 42 C7 DT A 3 16.022 0.812 5.519 1.00 27.88 C ATOM 43 C6 DT A 3 16.183 1.561 7.876 1.00 28.47 C ATOM 44 P DA A 4 18.086 5.795 12.416 1.00 31.73 P ATOM 45 OP1 DA A 4 17.375 6.760 13.287 1.00 32.30 O ATOM 46 OP2 DA A 4 18.914 6.284 11.291 1.00 30.98 O ATOM 47 O5' DA A 4 18.990 4.818 13.310 1.00 30.19 O ATOM 48 C5' DA A 4 18.352 3.875 14.193 1.00 28.84 C ATOM 49 C4' DA A 4 19.147 2.589 14.357 1.00 27.29 C ATOM 50 O4' DA A 4 18.936 1.714 13.218 1.00 27.16 O ATOM 51 C3' DA A 4 20.657 2.758 14.472 1.00 27.72 C ATOM 52 O3' DA A 4 21.148 2.136 15.677 1.00 28.76 O ATOM 53 C2' DA A 4 21.224 2.099 13.216 1.00 27.00 C ATOM 54 C1' DA A 4 20.147 1.077 12.884 1.00 25.65 C ATOM 55 N9 DA A 4 20.068 0.698 11.479 1.00 24.43 N ATOM 56 C8 DA A 4 19.947 1.535 10.406 1.00 22.87 C ATOM 57 N7 DA A 4 19.887 0.904 9.258 1.00 22.88 N ATOM 58 C5 DA A 4 19.964 -0.440 9.595 1.00 22.07 C ATOM 59 C6 DA A 4 19.953 -1.628 8.836 1.00 21.75 C ATOM 60 N6 DA A 4 19.850 -1.658 7.515 1.00 22.37 N ATOM 61 N1 DA A 4 20.056 -2.807 9.483 1.00 23.89 N ATOM 62 C2 DA A 4 20.158 -2.800 10.819 1.00 23.33 C ATOM 63 N3 DA A 4 20.169 -1.750 11.639 1.00 22.20 N ATOM 64 C4 DA A 4 20.074 -0.589 10.963 1.00 23.51 C ATOM 65 P DC A 5 22.571 2.595 16.259 1.00 29.03 P ATOM 66 OP1 DC A 5 22.488 2.695 17.730 1.00 28.79 O ATOM 67 OP2 DC A 5 23.051 3.759 15.470 1.00 28.34 O ATOM 68 O5' DC A 5 23.499 1.351 15.894 1.00 29.76 O ATOM 69 C5' DC A 5 22.985 0.037 15.745 1.00 30.28 C ATOM 70 C4' DC A 5 23.850 -0.746 14.775 1.00 30.42 C ATOM 71 O4' DC A 5 23.304 -0.661 13.443 1.00 30.02 O ATOM 72 C3' DC A 5 25.287 -0.251 14.629 1.00 31.29 C ATOM 73 O3' DC A 5 26.093 -1.104 15.394 1.00 30.74 O ATOM 74 C2' DC A 5 25.604 -0.362 13.133 1.00 31.67 C ATOM 75 C1' DC A 5 24.343 -1.024 12.571 1.00 30.41 C ATOM 76 N1 DC A 5 23.954 -0.614 11.191 1.00 30.69 N ATOM 77 C2 DC A 5 23.802 -1.605 10.209 1.00 30.47 C ATOM 78 O2 DC A 5 23.993 -2.797 10.502 1.00 30.80 O ATOM 79 N3 DC A 5 23.446 -1.223 8.953 1.00 30.36 N ATOM 80 C4 DC A 5 23.243 0.065 8.666 1.00 30.04 C ATOM 81 N4 DC A 5 22.897 0.370 7.412 1.00 29.36 N ATOM 82 C5 DC A 5 23.397 1.092 9.649 1.00 29.97 C ATOM 83 C6 DC A 5 23.749 0.710 10.886 1.00 30.84 C ATOM 84 P DG A 6 27.423 -0.599 16.099 1.00 32.60 P ATOM 85 OP1 DG A 6 27.489 -1.289 17.412 1.00 32.78 O ATOM 86 OP2 DG A 6 27.548 0.888 16.027 1.00 31.77 O ATOM 87 O5' DG A 6 28.511 -1.258 15.145 1.00 32.06 O ATOM 88 C5' DG A 6 28.772 -2.657 15.258 1.00 32.52 C ATOM 89 C4' DG A 6 29.993 -3.008 14.437 1.00 34.09 C ATOM 90 O4' DG A 6 29.706 -2.717 13.044 1.00 34.39 O ATOM 91 C3' DG A 6 31.243 -2.203 14.789 1.00 33.86 C ATOM 92 O3' DG A 6 31.996 -2.846 15.798 1.00 34.12 O ATOM 93 C2' DG A 6 31.982 -2.163 13.458 1.00 34.83 C ATOM 94 C1' DG A 6 30.813 -2.036 12.482 1.00 35.62 C ATOM 95 N9 DG A 6 30.410 -0.665 12.172 1.00 36.79 N ATOM 96 C8 DG A 6 30.338 0.424 13.010 1.00 37.76 C ATOM 97 N7 DG A 6 29.939 1.518 12.421 1.00 38.08 N ATOM 98 C5 DG A 6 29.730 1.129 11.104 1.00 37.93 C ATOM 99 C6 DG A 6 29.292 1.881 9.983 1.00 38.17 C ATOM 100 O6 DG A 6 28.998 3.087 9.957 1.00 36.69 O ATOM 101 N1 DG A 6 29.216 1.089 8.820 1.00 37.77 N ATOM 102 C2 DG A 6 29.524 -0.257 8.770 1.00 37.50 C ATOM 103 N2 DG A 6 29.407 -0.887 7.595 1.00 37.40 N ATOM 104 N3 DG A 6 29.935 -0.962 9.815 1.00 38.12 N ATOM 105 C4 DG A 6 30.014 -0.211 10.941 1.00 37.60 C TER 106 DG A 6 ATOM 107 O5' DC B 7 19.252 -11.464 -0.891 1.00 31.01 O ATOM 108 C5' DC B 7 19.722 -11.129 -2.190 1.00 32.66 C ATOM 109 C4' DC B 7 21.112 -10.501 -2.146 1.00 31.75 C ATOM 110 O4' DC B 7 21.812 -10.804 -3.382 1.00 31.77 O ATOM 111 C3' DC B 7 21.137 -8.979 -2.035 1.00 30.66 C ATOM 112 O3' DC B 7 22.328 -8.538 -1.351 1.00 30.06 O ATOM 113 C2' DC B 7 21.113 -8.541 -3.499 1.00 30.65 C ATOM 114 C1' DC B 7 21.975 -9.619 -4.164 1.00 31.05 C ATOM 115 N1 DC B 7 21.660 -9.958 -5.599 1.00 30.60 N ATOM 116 C2 DC B 7 22.590 -9.717 -6.631 1.00 30.78 C ATOM 117 O2 DC B 7 23.686 -9.192 -6.384 1.00 29.95 O ATOM 118 N3 DC B 7 22.255 -10.060 -7.907 1.00 30.49 N ATOM 119 C4 DC B 7 21.075 -10.634 -8.178 1.00 31.53 C ATOM 120 N4 DC B 7 20.797 -10.953 -9.450 1.00 31.37 N ATOM 121 C5 DC B 7 20.119 -10.896 -7.149 1.00 31.32 C ATOM 122 C6 DC B 7 20.457 -10.548 -5.899 1.00 31.86 C ATOM 123 P DG B 8 22.252 -7.488 -0.133 1.00 29.44 P ATOM 124 OP1 DG B 8 20.981 -6.729 -0.215 1.00 28.77 O ATOM 125 OP2 DG B 8 23.512 -6.720 -0.037 1.00 29.11 O ATOM 126 O5' DG B 8 22.158 -8.494 1.109 1.00 28.26 O ATOM 127 C5' DG B 8 23.148 -9.474 1.415 1.00 24.73 C ATOM 128 C4' DG B 8 23.509 -9.361 2.885 1.00 24.00 C ATOM 129 O4' DG B 8 24.043 -8.037 3.084 1.00 23.05 O ATOM 130 C3' DG B 8 22.350 -9.409 3.877 1.00 23.71 C ATOM 131 O3' DG B 8 22.024 -10.750 4.214 1.00 23.55 O ATOM 132 C2' DG B 8 22.918 -8.656 5.074 1.00 23.13 C ATOM 133 C1' DG B 8 23.907 -7.678 4.439 1.00 23.16 C ATOM 134 N9 DG B 8 23.486 -6.276 4.506 1.00 22.24 N ATOM 135 C8 DG B 8 23.184 -5.437 3.466 1.00 20.78 C ATOM 136 N7 DG B 8 22.832 -4.240 3.852 1.00 21.67 N ATOM 137 C5 DG B 8 22.922 -4.281 5.241 1.00 21.48 C ATOM 138 C6 DG B 8 22.673 -3.289 6.225 1.00 20.37 C ATOM 139 O6 DG B 8 22.320 -2.116 6.077 1.00 19.94 O ATOM 140 N1 DG B 8 22.890 -3.763 7.516 1.00 21.15 N ATOM 141 C2 DG B 8 23.289 -5.041 7.825 1.00 20.52 C ATOM 142 N2 DG B 8 23.434 -5.332 9.122 1.00 19.05 N ATOM 143 N3 DG B 8 23.530 -5.972 6.914 1.00 20.94 N ATOM 144 C4 DG B 8 23.325 -5.531 5.653 1.00 21.13 C ATOM 145 P DT B 9 20.557 -11.135 4.757 1.00 24.74 P ATOM 146 OP1 DT B 9 20.342 -12.549 4.403 1.00 21.47 O ATOM 147 OP2 DT B 9 19.592 -10.094 4.323 1.00 22.25 O ATOM 148 O5' DT B 9 20.694 -10.981 6.346 1.00 23.09 O ATOM 149 C5' DT B 9 21.721 -11.580 7.087 1.00 23.96 C ATOM 150 C4' DT B 9 21.583 -11.129 8.533 1.00 23.92 C ATOM 151 O4' DT B 9 21.712 -9.686 8.659 1.00 23.62 O ATOM 152 C3' DT B 9 20.255 -11.455 9.196 1.00 23.39 C ATOM 153 O3' DT B 9 20.591 -11.757 10.531 1.00 22.69 O ATOM 154 C2' DT B 9 19.438 -10.168 9.041 1.00 22.95 C ATOM 155 C1' DT B 9 20.532 -9.118 9.195 1.00 23.05 C ATOM 156 N1 DT B 9 20.320 -7.806 8.487 1.00 22.69 N ATOM 157 C2 DT B 9 20.376 -6.660 9.253 1.00 21.76 C ATOM 158 O2 DT B 9 20.560 -6.662 10.452 1.00 20.57 O ATOM 159 N3 DT B 9 20.205 -5.492 8.556 1.00 21.13 N ATOM 160 C4 DT B 9 19.978 -5.352 7.207 1.00 20.13 C ATOM 161 O4 DT B 9 19.831 -4.244 6.705 1.00 20.83 O ATOM 162 C5 DT B 9 19.932 -6.586 6.449 1.00 21.00 C ATOM 163 C7 DT B 9 19.692 -6.539 4.964 1.00 18.79 C ATOM 164 C6 DT B 9 20.104 -7.744 7.114 1.00 20.53 C ATOM 165 P DA B 10 19.515 -12.084 11.668 1.00 21.67 P ATOM 166 OP1 DA B 10 20.198 -13.060 12.569 1.00 22.61 O ATOM 167 OP2 DA B 10 18.195 -12.421 11.086 1.00 19.80 O ATOM 168 O5' DA B 10 19.398 -10.649 12.342 1.00 20.06 O ATOM 169 C5' DA B 10 20.401 -10.175 13.223 1.00 19.75 C ATOM 170 C4' DA B 10 19.832 -9.132 14.173 1.00 18.83 C ATOM 171 O4' DA B 10 19.557 -7.896 13.467 1.00 18.86 O ATOM 172 C3' DA B 10 18.521 -9.532 14.834 1.00 17.78 C ATOM 173 O3' DA B 10 18.502 -9.066 16.177 1.00 18.43 O ATOM 174 C2' DA B 10 17.452 -8.850 13.984 1.00 16.89 C ATOM 175 C1' DA B 10 18.167 -7.578 13.541 1.00 19.25 C ATOM 176 N9 DA B 10 17.797 -7.141 12.198 1.00 17.60 N ATOM 177 C8 DA B 10 17.670 -7.947 11.106 1.00 18.14 C ATOM 178 N7 DA B 10 17.357 -7.299 10.007 1.00 18.59 N ATOM 179 C5 DA B 10 17.265 -5.989 10.417 1.00 17.35 C ATOM 180 C6 DA B 10 16.954 -4.813 9.718 1.00 17.95 C ATOM 181 N6 DA B 10 16.668 -4.811 8.409 1.00 18.73 N ATOM 182 N1 DA B 10 16.947 -3.653 10.416 1.00 17.36 N ATOM 183 C2 DA B 10 17.214 -3.686 11.729 1.00 16.91 C ATOM 184 N3 DA B 10 17.521 -4.733 12.492 1.00 16.85 N ATOM 185 C4 DA B 10 17.533 -5.867 11.769 1.00 17.17 C ATOM 186 P DC B 11 17.191 -9.345 17.054 1.00 16.85 P ATOM 187 OP1 DC B 11 17.617 -9.373 18.470 1.00 18.35 O ATOM 188 OP2 DC B 11 16.478 -10.492 16.442 1.00 13.44 O ATOM 189 O5' DC B 11 16.238 -8.080 16.778 1.00 16.27 O ATOM 190 C5' DC B 11 16.563 -6.759 17.058 1.00 15.05 C ATOM 191 C4' DC B 11 15.411 -5.826 16.686 1.00 16.54 C ATOM 192 O4' DC B 11 15.370 -5.561 15.253 1.00 17.13 O ATOM 193 C3' DC B 11 13.996 -6.272 17.051 1.00 17.26 C ATOM 194 O3' DC B 11 13.308 -5.123 17.569 1.00 18.20 O ATOM 195 C2' DC B 11 13.426 -6.710 15.711 1.00 15.30 C ATOM 196 C1' DC B 11 14.031 -5.632 14.823 1.00 15.12 C ATOM 197 N1 DC B 11 13.955 -5.885 13.346 1.00 13.08 N ATOM 198 C2 DC B 11 13.728 -4.837 12.433 1.00 11.79 C ATOM 199 O2 DC B 11 13.596 -3.668 12.835 1.00 9.60 O ATOM 200 N3 DC B 11 13.678 -5.140 11.105 1.00 11.77 N ATOM 201 C4 DC B 11 13.814 -6.411 10.686 1.00 12.63 C ATOM 202 N4 DC B 11 13.752 -6.686 9.371 1.00 11.93 N ATOM 203 C5 DC B 11 14.045 -7.480 11.603 1.00 13.39 C ATOM 204 C6 DC B 11 14.111 -7.172 12.902 1.00 14.36 C ATOM 205 P DG B 12 11.966 -5.252 18.420 1.00 18.15 P ATOM 206 OP1 DG B 12 11.810 -3.984 19.170 1.00 17.07 O ATOM 207 OP2 DG B 12 11.960 -6.548 19.134 1.00 19.02 O ATOM 208 O5' DG B 12 10.854 -5.328 17.266 1.00 18.80 O ATOM 209 C5' DG B 12 10.127 -4.163 16.893 1.00 19.96 C ATOM 210 C4' DG B 12 8.810 -4.532 16.239 1.00 21.75 C ATOM 211 O4' DG B 12 8.960 -5.754 15.462 1.00 22.89 O ATOM 212 C3' DG B 12 7.691 -4.801 17.240 1.00 23.04 C ATOM 213 O3' DG B 12 6.927 -3.608 17.467 1.00 23.61 O ATOM 214 C2' DG B 12 6.899 -5.927 16.568 1.00 22.14 C ATOM 215 C1' DG B 12 8.011 -6.725 15.886 1.00 23.16 C ATOM 216 N9 DG B 12 8.761 -7.666 16.718 1.00 24.42 N ATOM 217 C8 DG B 12 8.614 -7.903 18.068 1.00 24.76 C ATOM 218 N7 DG B 12 9.450 -8.783 18.537 1.00 25.05 N ATOM 219 C5 DG B 12 10.205 -9.154 17.437 1.00 25.21 C ATOM 220 C6 DG B 12 11.271 -10.080 17.343 1.00 25.47 C ATOM 221 O6 DG B 12 11.754 -10.776 18.250 1.00 24.68 O ATOM 222 N1 DG B 12 11.776 -10.161 16.044 1.00 25.26 N ATOM 223 C2 DG B 12 11.302 -9.437 14.968 1.00 25.97 C ATOM 224 N2 DG B 12 11.905 -9.643 13.782 1.00 25.82 N ATOM 225 N3 DG B 12 10.302 -8.568 15.052 1.00 25.70 N ATOM 226 C4 DG B 12 9.802 -8.473 16.310 1.00 24.86 C TER 227 DG B 12 ATOM 228 O3' DC C 1 11.375 -13.046 5.353 1.00 39.12 O ATOM 229 P DG C 2 12.912 -12.733 5.676 1.00 40.56 P ATOM 230 OP1 DG C 2 13.344 -11.606 4.813 1.00 40.32 O ATOM 231 OP2 DG C 2 13.640 -14.026 5.601 1.00 40.58 O ATOM 232 O5' DG C 2 12.885 -12.247 7.205 1.00 38.75 O ATOM 233 C5' DG C 2 13.662 -12.922 8.223 1.00 36.13 C ATOM 234 C4' DG C 2 12.998 -12.852 9.593 1.00 33.38 C ATOM 235 O4' DG C 2 12.765 -11.470 9.953 1.00 32.49 O ATOM 236 C3' DG C 2 11.640 -13.530 9.730 1.00 32.75 C ATOM 237 O3' DG C 2 11.505 -14.053 11.047 1.00 32.57 O ATOM 238 C2' DG C 2 10.644 -12.396 9.477 1.00 32.14 C ATOM 239 C1' DG C 2 11.379 -11.186 10.049 1.00 31.32 C ATOM 240 N9 DG C 2 11.138 -9.931 9.333 1.00 29.27 N ATOM 241 C8 DG C 2 11.160 -9.743 7.974 1.00 28.21 C ATOM 242 N7 DG C 2 10.913 -8.518 7.603 1.00 27.49 N ATOM 243 C5 DG C 2 10.717 -7.840 8.796 1.00 26.58 C ATOM 244 C6 DG C 2 10.416 -6.478 9.022 1.00 25.60 C ATOM 245 O6 DG C 2 10.265 -5.576 8.187 1.00 25.73 O ATOM 246 N1 DG C 2 10.291 -6.186 10.377 1.00 25.43 N ATOM 247 C2 DG C 2 10.441 -7.093 11.392 1.00 25.52 C ATOM 248 N2 DG C 2 10.276 -6.603 12.628 1.00 24.18 N ATOM 249 N3 DG C 2 10.726 -8.383 11.198 1.00 27.09 N ATOM 250 C4 DG C 2 10.854 -8.690 9.875 1.00 28.10 C ATOM 251 P DT C 3 10.417 -15.173 11.428 1.00 33.01 P ATOM 252 OP1 DT C 3 11.141 -16.209 12.203 1.00 33.30 O ATOM 253 OP2 DT C 3 9.659 -15.574 10.222 1.00 33.11 O ATOM 254 O5' DT C 3 9.397 -14.405 12.392 1.00 32.53 O ATOM 255 C5' DT C 3 9.915 -13.665 13.499 1.00 32.45 C ATOM 256 C4' DT C 3 9.017 -12.508 13.908 1.00 31.16 C ATOM 257 O4' DT C 3 9.078 -11.430 12.936 1.00 30.81 O ATOM 258 C3' DT C 3 7.534 -12.832 14.089 1.00 30.75 C ATOM 259 O3' DT C 3 7.119 -12.307 15.347 1.00 30.83 O ATOM 260 C2' DT C 3 6.873 -12.075 12.932 1.00 31.18 C ATOM 261 C1' DT C 3 7.785 -10.855 12.899 1.00 30.43 C ATOM 262 N1 DT C 3 7.620 -9.888 11.756 1.00 29.53 N ATOM 263 C2 DT C 3 7.405 -8.551 12.043 1.00 30.44 C ATOM 264 O2 DT C 3 7.330 -8.107 13.176 1.00 31.79 O ATOM 265 N3 DT C 3 7.271 -7.725 10.950 1.00 30.04 N ATOM 266 C4 DT C 3 7.332 -8.093 9.615 1.00 29.75 C ATOM 267 O4 DT C 3 7.193 -7.266 8.719 1.00 27.45 O ATOM 268 C5 DT C 3 7.564 -9.507 9.375 1.00 29.83 C ATOM 269 C7 DT C 3 7.649 -10.046 7.977 1.00 30.49 C ATOM 270 C6 DT C 3 7.698 -10.321 10.441 1.00 30.20 C ATOM 271 P DA C 4 5.918 -12.919 16.222 1.00 30.72 P ATOM 272 OP1 DA C 4 6.498 -13.411 17.490 1.00 30.99 O ATOM 273 OP2 DA C 4 5.104 -13.837 15.394 1.00 30.03 O ATOM 274 O5' DA C 4 5.066 -11.604 16.532 1.00 29.61 O ATOM 275 C5' DA C 4 5.655 -10.488 17.191 1.00 28.10 C ATOM 276 C4' DA C 4 4.809 -9.250 16.966 1.00 26.38 C ATOM 277 O4' DA C 4 5.035 -8.753 15.625 1.00 26.71 O ATOM 278 C3' DA C 4 3.302 -9.490 17.084 1.00 26.77 C ATOM 279 O3' DA C 4 2.724 -8.579 18.035 1.00 25.78 O ATOM 280 C2' DA C 4 2.773 -9.290 15.658 1.00 25.89 C ATOM 281 C1' DA C 4 3.803 -8.337 15.068 1.00 25.23 C ATOM 282 N9 DA C 4 3.860 -8.302 13.599 1.00 23.49 N ATOM 283 C8 DA C 4 4.000 -9.348 12.727 1.00 22.98 C ATOM 284 N7 DA C 4 3.995 -8.983 11.457 1.00 23.53 N ATOM 285 C5 DA C 4 3.851 -7.604 11.487 1.00 21.01 C ATOM 286 C6 DA C 4 3.776 -6.611 10.478 1.00 20.32 C ATOM 287 N6 DA C 4 3.848 -6.860 9.160 1.00 16.56 N ATOM 288 N1 DA C 4 3.618 -5.320 10.875 1.00 20.28 N ATOM 289 C2 DA C 4 3.543 -5.049 12.185 1.00 20.37 C ATOM 290 N3 DA C 4 3.597 -5.895 13.216 1.00 21.19 N ATOM 291 C4 DA C 4 3.754 -7.171 12.803 1.00 22.53 C ATOM 292 P DC C 5 1.325 -8.925 18.727 1.00 26.56 P ATOM 293 OP1 DC C 5 1.502 -8.800 20.195 1.00 26.24 O ATOM 294 OP2 DC C 5 0.800 -10.175 18.131 1.00 24.61 O ATOM 295 O5' DC C 5 0.339 -7.742 18.275 1.00 24.00 O ATOM 296 C5' DC C 5 0.797 -6.572 17.624 1.00 20.97 C ATOM 297 C4' DC C 5 0.015 -6.290 16.351 1.00 18.88 C ATOM 298 O4' DC C 5 0.632 -6.952 15.211 1.00 16.84 O ATOM 299 C3' DC C 5 -1.435 -6.765 16.292 1.00 19.16 C ATOM 300 O3' DC C 5 -2.265 -5.673 16.629 1.00 21.30 O ATOM 301 C2' DC C 5 -1.626 -7.205 14.829 1.00 15.65 C ATOM 302 C1' DC C 5 -0.310 -6.769 14.181 1.00 11.49 C ATOM 303 N1 DC C 5 0.082 -7.519 12.934 1.00 4.55 N ATOM 304 C2 DC C 5 0.220 -6.838 11.709 1.00 2.00 C ATOM 305 O2 DC C 5 0.020 -5.580 11.687 1.00 2.00 O ATOM 306 N3 DC C 5 0.566 -7.574 10.604 1.00 2.00 N ATOM 307 C4 DC C 5 0.754 -8.890 10.713 1.00 2.00 C ATOM 308 N4 DC C 5 1.095 -9.554 9.610 1.00 2.00 N ATOM 309 C5 DC C 5 0.621 -9.583 11.970 1.00 2.00 C ATOM 310 C6 DC C 5 0.275 -8.860 13.030 1.00 2.00 C ATOM 311 P DG C 6 -3.821 -5.830 17.007 1.00 24.73 P ATOM 312 OP1 DG C 6 -4.159 -4.606 17.787 1.00 24.72 O ATOM 313 OP2 DG C 6 -4.059 -7.156 17.616 1.00 22.70 O ATOM 314 O5' DG C 6 -4.558 -5.780 15.586 1.00 24.58 O ATOM 315 C5' DG C 6 -5.011 -4.515 15.069 1.00 25.90 C ATOM 316 C4' DG C 6 -6.162 -4.651 14.079 1.00 25.13 C ATOM 317 O4' DG C 6 -5.786 -5.560 13.018 1.00 24.34 O ATOM 318 C3' DG C 6 -7.458 -5.234 14.634 1.00 25.43 C ATOM 319 O3' DG C 6 -8.254 -4.198 15.177 1.00 25.69 O ATOM 320 C2' DG C 6 -8.126 -5.846 13.404 1.00 24.62 C ATOM 321 C1' DG C 6 -6.950 -6.179 12.485 1.00 24.41 C ATOM 322 N9 DG C 6 -6.700 -7.614 12.369 1.00 23.92 N ATOM 323 C8 DG C 6 -6.748 -8.542 13.386 1.00 24.05 C ATOM 324 N7 DG C 6 -6.491 -9.763 13.004 1.00 23.37 N ATOM 325 C5 DG C 6 -6.252 -9.638 11.640 1.00 23.54 C ATOM 326 C6 DG C 6 -5.899 -10.628 10.684 1.00 22.92 C ATOM 327 O6 DG C 6 -5.744 -11.848 10.849 1.00 22.81 O ATOM 328 N1 DG C 6 -5.744 -10.084 9.418 1.00 22.83 N ATOM 329 C2 DG C 6 -5.896 -8.752 9.107 1.00 23.17 C ATOM 330 N2 DG C 6 -5.706 -8.420 7.826 1.00 22.99 N ATOM 331 N3 DG C 6 -6.216 -7.815 9.994 1.00 23.43 N ATOM 332 C4 DG C 6 -6.374 -8.322 11.238 1.00 22.68 C TER 333 DG C 6 ATOM 334 O5' DC D 7 4.637 -0.271 -0.531 1.00 32.27 O ATOM 335 C5' DC D 7 4.291 -1.649 -0.523 1.00 33.97 C ATOM 336 C4' DC D 7 3.076 -1.940 -1.391 1.00 33.75 C ATOM 337 O4' DC D 7 3.298 -1.456 -2.746 1.00 35.05 O ATOM 338 C3' DC D 7 2.740 -3.429 -1.498 1.00 33.06 C ATOM 339 O3' DC D 7 1.398 -3.682 -1.051 1.00 29.47 O ATOM 340 C2' DC D 7 2.918 -3.754 -2.989 1.00 35.08 C ATOM 341 C1' DC D 7 2.762 -2.393 -3.667 1.00 35.88 C ATOM 342 N1 DC D 7 3.425 -2.296 -5.038 1.00 37.49 N ATOM 343 C2 DC D 7 2.650 -2.391 -6.215 1.00 38.12 C ATOM 344 O2 DC D 7 1.427 -2.552 -6.144 1.00 37.50 O ATOM 345 N3 DC D 7 3.268 -2.315 -7.429 1.00 39.05 N ATOM 346 C4 DC D 7 4.594 -2.145 -7.506 1.00 38.90 C ATOM 347 N4 DC D 7 5.143 -2.070 -8.722 1.00 38.04 N ATOM 348 C5 DC D 7 5.404 -2.046 -6.329 1.00 38.89 C ATOM 349 C6 DC D 7 4.785 -2.128 -5.141 1.00 38.24 C ATOM 350 P DG D 8 1.042 -4.567 0.248 1.00 27.67 P ATOM 351 OP1 DG D 8 2.154 -5.517 0.548 1.00 25.98 O ATOM 352 OP2 DG D 8 -0.323 -5.105 0.088 1.00 23.63 O ATOM 353 O5' DG D 8 0.974 -3.419 1.362 1.00 25.16 O ATOM 354 C5' DG D 8 -0.211 -2.615 1.367 1.00 23.84 C ATOM 355 C4' DG D 8 -0.369 -1.763 2.602 1.00 21.00 C ATOM 356 O4' DG D 8 -1.061 -2.529 3.617 1.00 20.05 O ATOM 357 C3' DG D 8 0.953 -1.309 3.182 1.00 21.67 C ATOM 358 O3' DG D 8 1.064 0.089 2.976 1.00 24.88 O ATOM 359 C2' DG D 8 0.850 -1.635 4.665 1.00 20.50 C ATOM 360 C1' DG D 8 -0.316 -2.596 4.803 1.00 16.30 C ATOM 361 N9 DG D 8 0.043 -3.977 5.111 1.00 12.79 N ATOM 362 C8 DG D 8 0.305 -5.048 4.271 1.00 13.82 C ATOM 363 N7 DG D 8 0.572 -6.163 4.922 1.00 11.46 N ATOM 364 C5 DG D 8 0.478 -5.813 6.260 1.00 8.49 C ATOM 365 C6 DG D 8 0.660 -6.563 7.456 1.00 7.30 C ATOM 366 O6 DG D 8 0.941 -7.765 7.551 1.00 4.59 O ATOM 367 N1 DG D 8 0.466 -5.780 8.615 1.00 3.76 N ATOM 368 C2 DG D 8 0.135 -4.447 8.616 1.00 4.62 C ATOM 369 N2 DG D 8 -0.038 -3.793 9.781 1.00 5.68 N ATOM 370 N3 DG D 8 -0.034 -3.752 7.509 1.00 8.67 N ATOM 371 C4 DG D 8 0.145 -4.479 6.379 1.00 10.21 C ATOM 372 P DT D 9 2.361 0.872 3.473 1.00 27.40 P ATOM 373 OP1 DT D 9 2.206 2.287 3.054 1.00 27.65 O ATOM 374 OP2 DT D 9 3.542 0.071 3.036 1.00 26.42 O ATOM 375 O5' DT D 9 2.240 0.814 5.062 1.00 26.20 O ATOM 376 C5' DT D 9 1.601 1.860 5.794 1.00 24.99 C ATOM 377 C4' DT D 9 1.933 1.722 7.267 1.00 23.03 C ATOM 378 O4' DT D 9 1.927 0.318 7.619 1.00 22.11 O ATOM 379 C3' DT D 9 3.304 2.226 7.704 1.00 22.40 C ATOM 380 O3' DT D 9 3.194 2.694 9.055 1.00 21.67 O ATOM 381 C2' DT D 9 4.146 0.960 7.606 1.00 23.03 C ATOM 382 C1' DT D 9 3.161 -0.054 8.180 1.00 21.88 C ATOM 383 N1 DT D 9 3.369 -1.504 7.845 1.00 21.90 N ATOM 384 C2 DT D 9 3.407 -2.437 8.870 1.00 21.07 C ATOM 385 O2 DT D 9 3.301 -2.149 10.045 1.00 20.57 O ATOM 386 N3 DT D 9 3.580 -3.734 8.464 1.00 20.42 N ATOM 387 C4 DT D 9 3.712 -4.183 7.156 1.00 20.44 C ATOM 388 O4 DT D 9 3.863 -5.370 6.882 1.00 18.50 O ATOM 389 C5 DT D 9 3.658 -3.157 6.135 1.00 21.06 C ATOM 390 C7 DT D 9 3.785 -3.513 4.674 1.00 21.27 C ATOM 391 C6 DT D 9 3.489 -1.891 6.527 1.00 20.53 C ATOM 392 P DA D 10 4.369 3.502 9.794 1.00 22.89 P ATOM 393 OP1 DA D 10 3.729 4.629 10.508 1.00 20.15 O ATOM 394 OP2 DA D 10 5.479 3.734 8.834 1.00 21.98 O ATOM 395 O5' DA D 10 4.881 2.451 10.881 1.00 20.48 O ATOM 396 C5' DA D 10 3.938 1.890 11.793 1.00 17.83 C ATOM 397 C4' DA D 10 4.665 1.358 13.002 1.00 15.71 C ATOM 398 O4' DA D 10 4.912 -0.048 12.784 1.00 13.87 O ATOM 399 C3' DA D 10 6.020 1.992 13.262 1.00 15.99 C ATOM 400 O3' DA D 10 6.167 2.129 14.676 1.00 18.46 O ATOM 401 C2' DA D 10 7.014 1.041 12.585 1.00 13.36 C ATOM 402 C1' DA D 10 6.274 -0.293 12.528 1.00 9.79 C ATOM 403 N9 DA D 10 6.384 -1.065 11.280 1.00 5.15 N ATOM 404 C8 DA D 10 6.376 -0.616 9.982 1.00 2.00 C ATOM 405 N7 DA D 10 6.470 -1.588 9.098 1.00 2.80 N ATOM 406 C5 DA D 10 6.594 -2.748 9.870 1.00 2.00 C ATOM 407 C6 DA D 10 6.719 -4.133 9.582 1.00 2.00 C ATOM 408 N6 DA D 10 6.800 -4.602 8.325 1.00 2.00 N ATOM 409 N1 DA D 10 6.805 -5.034 10.620 1.00 2.00 N ATOM 410 C2 DA D 10 6.702 -4.580 11.881 1.00 2.00 C ATOM 411 N3 DA D 10 6.559 -3.298 12.249 1.00 2.00 N ATOM 412 C4 DA D 10 6.515 -2.444 11.206 1.00 2.00 C ATOM 413 P DC D 11 7.356 2.954 15.363 1.00 19.74 P ATOM 414 OP1 DC D 11 6.882 3.448 16.668 1.00 20.16 O ATOM 415 OP2 DC D 11 8.005 3.883 14.404 1.00 21.22 O ATOM 416 O5' DC D 11 8.375 1.749 15.614 1.00 19.69 O ATOM 417 C5' DC D 11 7.898 0.470 16.010 1.00 17.85 C ATOM 418 C4' DC D 11 9.016 -0.553 15.948 1.00 18.17 C ATOM 419 O4' DC D 11 8.886 -1.307 14.716 1.00 18.55 O ATOM 420 C3' DC D 11 10.452 0.009 15.985 1.00 17.93 C ATOM 421 O3' DC D 11 11.201 -0.695 17.017 1.00 16.87 O ATOM 422 C2' DC D 11 10.930 -0.223 14.545 1.00 17.73 C ATOM 423 C1' DC D 11 10.184 -1.510 14.205 1.00 19.20 C ATOM 424 N1 DC D 11 10.121 -1.918 12.747 1.00 20.07 N ATOM 425 C2 DC D 11 10.252 -3.278 12.434 1.00 21.34 C ATOM 426 O2 DC D 11 10.407 -4.108 13.350 1.00 23.55 O ATOM 427 N3 DC D 11 10.201 -3.653 11.130 1.00 20.99 N ATOM 428 C4 DC D 11 10.027 -2.730 10.168 1.00 19.51 C ATOM 429 N4 DC D 11 9.988 -3.149 8.901 1.00 17.91 N ATOM 430 C5 DC D 11 9.885 -1.345 10.466 1.00 18.50 C ATOM 431 C6 DC D 11 9.943 -0.988 11.753 1.00 19.60 C ATOM 432 P DG D 12 12.715 -0.392 17.497 1.00 17.22 P ATOM 433 OP1 DG D 12 13.157 -1.502 18.372 1.00 14.79 O ATOM 434 OP2 DG D 12 12.788 0.990 17.998 1.00 16.44 O ATOM 435 O5' DG D 12 13.550 -0.511 16.144 1.00 19.92 O ATOM 436 C5' DG D 12 13.815 -1.811 15.607 1.00 22.89 C ATOM 437 C4' DG D 12 15.174 -1.803 14.944 1.00 25.09 C ATOM 438 O4' DG D 12 15.184 -0.742 13.960 1.00 26.87 O ATOM 439 C3' DG D 12 16.324 -1.519 15.895 1.00 24.90 C ATOM 440 O3' DG D 12 16.995 -2.720 16.179 1.00 24.89 O ATOM 441 C2' DG D 12 17.221 -0.582 15.091 1.00 26.89 C ATOM 442 C1' DG D 12 16.220 0.175 14.228 1.00 27.55 C ATOM 443 N9 DG D 12 15.602 1.343 14.844 1.00 29.93 N ATOM 444 C8 DG D 12 15.952 1.966 16.020 1.00 30.19 C ATOM 445 N7 DG D 12 15.198 2.987 16.309 1.00 31.44 N ATOM 446 C5 DG D 12 14.281 3.047 15.265 1.00 32.27 C ATOM 447 C6 DG D 12 13.209 3.950 15.034 1.00 33.57 C ATOM 448 O6 DG D 12 12.856 4.910 15.739 1.00 35.23 O ATOM 449 N1 DG D 12 12.519 3.660 13.855 1.00 32.96 N ATOM 450 C2 DG D 12 12.838 2.619 13.004 1.00 32.56 C ATOM 451 N2 DG D 12 12.083 2.477 11.909 1.00 32.11 N ATOM 452 N3 DG D 12 13.837 1.771 13.209 1.00 32.01 N ATOM 453 C4 DG D 12 14.516 2.039 14.354 1.00 31.45 C TER 454 DG D 12 HETATM 455 CA CA B 101 12.273 -2.830 20.982 1.00 45.38 CA HETATM 456 C36 KPT C 101 -2.558 -10.842 12.762 1.00 38.26 C HETATM 457 O4 KPT C 101 -2.078 -11.538 11.593 1.00 37.50 O HETATM 458 O3 KPT C 101 -2.785 -9.499 12.293 1.00 37.94 O HETATM 459 C18 KPT C 101 -2.588 -9.477 10.942 1.00 38.28 C HETATM 460 C13 KPT C 101 -2.758 -8.427 10.054 1.00 38.12 C HETATM 461 C14 KPT C 101 -3.184 -7.173 10.479 1.00 38.45 C HETATM 462 C17 KPT C 101 -2.164 -10.703 10.520 1.00 38.01 C HETATM 463 C16 KPT C 101 -1.880 -10.971 9.184 1.00 38.27 C HETATM 464 C15 KPT C 101 -2.048 -9.924 8.272 1.00 38.72 C HETATM 465 C12 KPT C 101 -2.489 -8.664 8.706 1.00 38.33 C HETATM 466 C11 KPT C 101 -2.652 -7.621 7.801 1.00 38.25 C HETATM 467 C10 KPT C 101 -3.086 -6.374 8.268 1.00 38.81 C HETATM 468 N KPT C 101 -3.350 -6.181 9.587 1.00 38.62 N HETATM 469 C9 KPT C 101 -3.806 -4.880 10.102 1.00 38.59 C HETATM 470 C8 KPT C 101 -3.268 -3.707 9.282 1.00 38.73 C HETATM 471 C6 KPT C 101 -3.290 -5.338 7.358 1.00 38.88 C HETATM 472 C5 KPT C 101 -3.414 -4.015 7.807 1.00 38.86 C HETATM 473 C4 KPT C 101 -3.657 -2.975 6.904 1.00 39.25 C HETATM 474 C7 KPT C 101 -3.449 -5.648 5.999 1.00 38.94 C HETATM 475 C3 KPT C 101 -3.684 -4.598 5.121 1.00 39.39 C HETATM 476 C2 KPT C 101 -3.787 -3.313 5.558 1.00 39.37 C HETATM 477 O2 KPT C 101 -4.020 -2.500 4.487 1.00 40.24 O HETATM 478 O1 KPT C 101 -3.859 -4.639 3.766 1.00 40.36 O HETATM 479 C1 KPT C 101 -4.157 -3.310 3.303 1.00 40.40 C HETATM 480 O HOH A 101 20.061 -2.300 14.628 1.00 16.60 O HETATM 481 O HOH A 102 27.495 -2.617 20.184 1.00 14.51 O HETATM 482 O HOH A 103 29.020 4.365 6.636 1.00 19.94 O HETATM 483 O HOH A 104 24.601 10.419 1.261 1.00 22.68 O HETATM 484 O HOH A 105 11.354 6.343 1.604 1.00 22.61 O HETATM 485 O HOH A 106 21.523 7.037 12.871 1.00 25.99 O HETATM 486 O HOH B 201 8.391 -10.044 20.660 1.00 20.89 O HETATM 487 O HOH B 202 17.952 -3.282 3.156 1.00 30.51 O HETATM 488 O HOH C 201 -6.911 -4.741 17.977 1.00 19.00 O HETATM 489 O HOH C 202 0.542 -8.977 23.422 1.00 29.66 O HETATM 490 O HOH D 101 12.359 7.615 15.699 1.00 16.51 O HETATM 491 O HOH D 102 6.092 2.875 1.068 1.00 23.77 O HETATM 492 O HOH D 103 6.215 -2.872 14.867 1.00 11.69 O HETATM 493 O HOH D 104 2.484 -8.094 3.396 1.00 27.93 O HETATM 494 O HOH D 105 3.732 3.080 16.520 1.00 33.59 O CONECT 206 455 CONECT 433 455 CONECT 455 206 433 CONECT 456 457 458 CONECT 457 456 462 CONECT 458 456 459 CONECT 459 458 460 462 CONECT 460 459 461 465 CONECT 461 460 468 CONECT 462 457 459 463 CONECT 463 462 464 CONECT 464 463 465 CONECT 465 460 464 466 CONECT 466 465 467 CONECT 467 466 468 471 CONECT 468 461 467 469 CONECT 469 468 470 CONECT 470 469 472 CONECT 471 467 472 474 CONECT 472 470 471 473 CONECT 473 472 476 CONECT 474 471 475 CONECT 475 474 476 478 CONECT 476 473 475 477 CONECT 477 476 479 CONECT 478 475 479 CONECT 479 477 478 MASTER 337 0 2 0 0 0 3 6 490 4 27 4 END