HEADER DNA 12-JUL-22 7YGP TITLE DNA DUPLEX CONTAINING 5OHU-T BASE PAIRS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*GP*GP*AP*CP*CP*TP*(OHU)P*GP*GP*TP*CP*C)-3'); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS DNA, METAL-MEDIATED BASE PAIR, METALLO-DNA, MERCURY EXPDTA X-RAY DIFFRACTION AUTHOR J.KONDO,H.TORIGOE,F.ARAKAWA REVDAT 2 29-MAY-24 7YGP 1 REMARK REVDAT 1 24-MAY-23 7YGP 0 JRNL AUTH H.TORIGOE,J.KONDO,F.ARAKAWA JRNL TITL SPECIFIC BINDING OF HG 2+ TO MISMATCHED BASE PAIRS INVOLVING JRNL TITL 2 5-HYDROXYURACIL IN DUPLEX DNA. JRNL REF J.INORG.BIOCHEM. V. 241 12125 2023 JRNL REFN ISSN 0162-0134 JRNL PMID 36716510 JRNL DOI 10.1016/J.JINORGBIO.2023.112125 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 5336 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.910 REMARK 3 FREE R VALUE TEST SET COUNT : 529 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.7870 - 3.1667 0.95 1219 128 0.1681 0.1691 REMARK 3 2 3.1667 - 2.5149 0.96 1218 136 0.2924 0.3272 REMARK 3 3 2.5149 - 2.1974 0.95 1186 129 0.3602 0.3901 REMARK 3 4 2.1974 - 1.9970 0.93 1184 136 0.4347 0.5147 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 41.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.17 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 276 REMARK 3 ANGLE : 1.153 430 REMARK 3 CHIRALITY : 0.045 46 REMARK 3 PLANARITY : 0.005 12 REMARK 3 DIHEDRAL : 19.079 110 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7YGP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1300030886. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00835 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5348 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.997 REMARK 200 RESOLUTION RANGE LOW (A) : 20.787 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 2.655 REMARK 200 R MERGE (I) : 0.02600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.39600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.070 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPD, LITHIUM CHLORIDE, HEXAMMINE REMARK 280 COBALT CHLORIDE, SODIUM CACODYLATE, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.33000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.66000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.66000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 18.33000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 55.00800 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 31.75888 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 18.33000 DBREF 7YGP A 1 12 PDB 7YGP 7YGP 1 12 SEQRES 1 A 12 DG DG DA DC DC DT OHU DG DG DT DC DC HET OHU A 7 20 HET NCO A 101 7 HET CO A 102 1 HETNAM OHU 2'-DEOXY-5-HYDROXYURIDINE 5'-(DIHYDROGEN PHOSPHATE) HETNAM NCO COBALT HEXAMMINE(III) HETNAM CO COBALT (II) ION FORMUL 1 OHU C9 H13 N2 O9 P FORMUL 2 NCO CO H18 N6 3+ FORMUL 3 CO CO 2+ LINK O3' DT A 6 P OHU A 7 1555 1555 1.62 LINK O3' OHU A 7 P DG A 8 1555 1555 1.62 CRYST1 36.672 36.672 54.990 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027269 0.015744 0.000000 0.00000 SCALE2 0.000000 0.031487 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018185 0.00000 ATOM 1 O5' DG A 1 35.900 25.166 2.298 1.00 60.95 O ATOM 2 C5' DG A 1 35.534 26.358 2.974 1.00 59.74 C ATOM 3 C4' DG A 1 34.454 27.101 2.208 1.00 59.32 C ATOM 4 O4' DG A 1 34.667 26.934 0.787 1.00 63.01 O ATOM 5 C3' DG A 1 33.045 26.593 2.424 1.00 63.50 C ATOM 6 O3' DG A 1 32.495 27.144 3.603 1.00 62.70 O ATOM 7 C2' DG A 1 32.337 27.112 1.179 1.00 60.39 C ATOM 8 C1' DG A 1 33.414 26.921 0.118 1.00 56.91 C ATOM 9 N9 DG A 1 33.302 25.673 -0.626 1.00 51.59 N ATOM 10 C8 DG A 1 34.214 24.650 -0.662 1.00 50.49 C ATOM 11 N7 DG A 1 33.856 23.667 -1.439 1.00 54.82 N ATOM 12 C5 DG A 1 32.633 24.067 -1.947 1.00 52.98 C ATOM 13 C6 DG A 1 31.762 23.409 -2.848 1.00 57.46 C ATOM 14 O6 DG A 1 31.911 22.304 -3.393 1.00 53.81 O ATOM 15 N1 DG A 1 30.622 24.169 -3.106 1.00 53.83 N ATOM 16 C2 DG A 1 30.370 25.410 -2.563 1.00 54.35 C ATOM 17 N2 DG A 1 29.221 25.999 -2.925 1.00 57.14 N ATOM 18 N3 DG A 1 31.178 26.027 -1.722 1.00 52.29 N ATOM 19 C4 DG A 1 32.283 25.303 -1.461 1.00 50.94 C ATOM 20 P DG A 2 31.579 26.218 4.538 1.00 67.36 P ATOM 21 OP1 DG A 2 31.429 26.863 5.869 1.00 69.89 O ATOM 22 OP2 DG A 2 32.197 24.878 4.400 1.00 57.31 O ATOM 23 O5' DG A 2 30.151 26.252 3.834 1.00 62.04 O ATOM 24 C5' DG A 2 29.488 27.489 3.696 1.00 63.59 C ATOM 25 C4' DG A 2 28.345 27.381 2.711 1.00 60.62 C ATOM 26 O4' DG A 2 28.862 27.075 1.396 1.00 62.17 O ATOM 27 C3' DG A 2 27.368 26.268 3.004 1.00 62.28 C ATOM 28 O3' DG A 2 26.401 26.712 3.929 1.00 66.45 O ATOM 29 C2' DG A 2 26.760 26.005 1.628 1.00 61.81 C ATOM 30 C1' DG A 2 27.979 26.178 0.728 1.00 61.93 C ATOM 31 N9 DG A 2 28.708 24.934 0.440 1.00 57.76 N ATOM 32 C8 DG A 2 29.907 24.538 0.982 1.00 56.72 C ATOM 33 N7 DG A 2 30.332 23.389 0.532 1.00 56.67 N ATOM 34 C5 DG A 2 29.357 22.999 -0.374 1.00 55.70 C ATOM 35 C6 DG A 2 29.281 21.837 -1.183 1.00 54.14 C ATOM 36 O6 DG A 2 30.087 20.893 -1.254 1.00 56.75 O ATOM 37 N1 DG A 2 28.126 21.829 -1.959 1.00 54.56 N ATOM 38 C2 DG A 2 27.167 22.825 -1.954 1.00 58.02 C ATOM 39 N2 DG A 2 26.123 22.648 -2.769 1.00 60.60 N ATOM 40 N3 DG A 2 27.230 23.918 -1.199 1.00 60.25 N ATOM 41 C4 DG A 2 28.348 23.939 -0.440 1.00 54.91 C ATOM 42 P DA A 3 25.799 25.661 4.973 1.00 68.97 P ATOM 43 OP1 DA A 3 25.094 26.368 6.072 1.00 65.14 O ATOM 44 OP2 DA A 3 26.940 24.773 5.272 1.00 60.06 O ATOM 45 O5' DA A 3 24.748 24.828 4.098 1.00 62.92 O ATOM 46 C5' DA A 3 23.701 25.494 3.419 1.00 63.79 C ATOM 47 C4' DA A 3 23.036 24.565 2.423 1.00 63.30 C ATOM 48 O4' DA A 3 23.948 24.283 1.341 1.00 66.03 O ATOM 49 C3' DA A 3 22.690 23.191 2.959 1.00 64.34 C ATOM 50 O3' DA A 3 21.474 23.224 3.656 1.00 66.08 O ATOM 51 C2' DA A 3 22.571 22.388 1.675 1.00 58.52 C ATOM 52 C1' DA A 3 23.743 22.947 0.885 1.00 60.30 C ATOM 53 N9 DA A 3 24.980 22.198 1.074 1.00 57.99 N ATOM 54 C8 DA A 3 25.994 22.471 1.953 1.00 55.13 C ATOM 55 N7 DA A 3 26.995 21.616 1.885 1.00 53.13 N ATOM 56 C5 DA A 3 26.607 20.731 0.891 1.00 54.76 C ATOM 57 C6 DA A 3 27.223 19.594 0.331 1.00 55.01 C ATOM 58 N6 DA A 3 28.423 19.140 0.706 1.00 52.90 N ATOM 59 N1 DA A 3 26.557 18.940 -0.639 1.00 54.58 N ATOM 60 C2 DA A 3 25.364 19.395 -1.022 1.00 55.22 C ATOM 61 N3 DA A 3 24.688 20.445 -0.580 1.00 55.13 N ATOM 62 C4 DA A 3 25.369 21.076 0.385 1.00 57.79 C ATOM 63 P DC A 4 21.282 22.261 4.919 1.00 71.42 P ATOM 64 OP1 DC A 4 20.032 22.679 5.593 1.00 80.55 O ATOM 65 OP2 DC A 4 22.568 22.251 5.666 1.00 62.20 O ATOM 66 O5' DC A 4 21.127 20.804 4.268 1.00 65.78 O ATOM 67 C5' DC A 4 19.996 20.485 3.484 1.00 62.39 C ATOM 68 C4' DC A 4 20.229 19.202 2.706 1.00 56.57 C ATOM 69 O4' DC A 4 21.398 19.351 1.874 1.00 58.95 O ATOM 70 C3' DC A 4 20.551 17.980 3.538 1.00 62.29 C ATOM 71 O3' DC A 4 19.384 17.414 4.072 1.00 65.31 O ATOM 72 C2' DC A 4 21.176 17.081 2.487 1.00 63.67 C ATOM 73 C1' DC A 4 22.022 18.089 1.713 1.00 56.51 C ATOM 74 N1 DC A 4 23.435 18.172 2.214 1.00 58.98 N ATOM 75 C2 DC A 4 24.369 17.250 1.751 1.00 56.45 C ATOM 76 O2 DC A 4 24.010 16.398 0.927 1.00 60.08 O ATOM 77 N3 DC A 4 25.643 17.324 2.193 1.00 51.89 N ATOM 78 C4 DC A 4 25.987 18.258 3.082 1.00 56.43 C ATOM 79 N4 DC A 4 27.256 18.280 3.501 1.00 51.59 N ATOM 80 C5 DC A 4 25.049 19.208 3.574 1.00 54.07 C ATOM 81 C6 DC A 4 23.795 19.130 3.116 1.00 57.48 C ATOM 82 P DC A 5 19.473 16.573 5.430 1.00 70.47 P ATOM 83 OP1 DC A 5 18.088 16.371 5.913 1.00 74.09 O ATOM 84 OP2 DC A 5 20.482 17.227 6.299 1.00 65.14 O ATOM 85 O5' DC A 5 20.112 15.176 4.983 1.00 69.61 O ATOM 86 C5' DC A 5 19.444 14.354 4.042 1.00 61.94 C ATOM 87 C4' DC A 5 20.338 13.212 3.593 1.00 54.32 C ATOM 88 O4' DC A 5 21.458 13.746 2.850 1.00 59.95 O ATOM 89 C3' DC A 5 21.009 12.397 4.690 1.00 57.34 C ATOM 90 O3' DC A 5 20.130 11.429 5.250 1.00 64.02 O ATOM 91 C2' DC A 5 22.113 11.717 3.895 1.00 57.21 C ATOM 92 C1' DC A 5 22.563 12.851 2.974 1.00 57.06 C ATOM 93 N1 DC A 5 23.737 13.593 3.511 1.00 55.26 N ATOM 94 C2 DC A 5 25.004 13.034 3.388 1.00 53.57 C ATOM 95 O2 DC A 5 25.122 11.942 2.823 1.00 54.20 O ATOM 96 N3 DC A 5 26.071 13.709 3.888 1.00 55.15 N ATOM 97 C4 DC A 5 25.889 14.886 4.499 1.00 51.00 C ATOM 98 N4 DC A 5 26.961 15.515 4.967 1.00 48.58 N ATOM 99 C5 DC A 5 24.600 15.465 4.645 1.00 53.15 C ATOM 100 C6 DC A 5 23.559 14.793 4.142 1.00 55.45 C ATOM 101 P DT A 6 20.373 10.915 6.756 1.00 60.06 P ATOM 102 OP1 DT A 6 19.321 9.926 7.075 1.00 61.02 O ATOM 103 OP2 DT A 6 20.544 12.134 7.564 1.00 52.15 O ATOM 104 O5' DT A 6 21.803 10.167 6.715 1.00 61.47 O ATOM 105 C5' DT A 6 21.912 8.855 6.157 1.00 56.32 C ATOM 106 C4' DT A 6 23.363 8.388 6.087 1.00 56.89 C ATOM 107 O4' DT A 6 24.148 9.363 5.352 1.00 53.67 O ATOM 108 C3' DT A 6 24.108 8.257 7.413 1.00 51.03 C ATOM 109 O3' DT A 6 23.814 7.023 8.084 1.00 56.48 O ATOM 110 C2' DT A 6 25.550 8.282 6.923 1.00 58.66 C ATOM 111 C1' DT A 6 25.482 9.378 5.861 1.00 59.11 C ATOM 112 N1 DT A 6 25.800 10.750 6.421 1.00 54.75 N ATOM 113 C2 DT A 6 27.118 11.123 6.596 1.00 53.02 C ATOM 114 O2 DT A 6 28.059 10.404 6.308 1.00 56.92 O ATOM 115 N3 DT A 6 27.295 12.376 7.126 1.00 56.02 N ATOM 116 C4 DT A 6 26.299 13.267 7.497 1.00 55.37 C ATOM 117 O4 DT A 6 26.545 14.371 7.961 1.00 59.36 O ATOM 118 C5 DT A 6 24.950 12.807 7.297 1.00 55.62 C ATOM 119 C7 DT A 6 23.795 13.691 7.656 1.00 59.69 C ATOM 120 C6 DT A 6 24.768 11.587 6.780 1.00 54.23 C HETATM 121 P OHU A 7 23.777 6.983 9.706 1.00 62.03 P HETATM 122 N1 OHU A 7 28.772 9.397 10.274 1.00 55.73 N HETATM 123 C2 OHU A 7 29.891 10.173 10.494 1.00 59.37 C HETATM 124 O2 OHU A 7 30.997 9.659 10.536 1.00 64.11 O HETATM 125 N3 OHU A 7 29.709 11.537 10.641 1.00 47.66 N HETATM 126 C4 OHU A 7 28.522 12.201 10.626 1.00 48.88 C HETATM 127 O4 OHU A 7 28.404 13.414 10.763 1.00 48.01 O HETATM 128 C5 OHU A 7 27.375 11.351 10.400 1.00 60.31 C HETATM 129 O5 OHU A 7 26.144 11.980 10.373 1.00 63.95 O HETATM 130 C6 OHU A 7 27.531 10.018 10.232 1.00 55.66 C HETATM 131 C1' OHU A 7 28.954 7.887 10.096 1.00 55.47 C HETATM 132 C2' OHU A 7 28.951 7.031 11.370 1.00 64.84 C HETATM 133 C3' OHU A 7 27.580 6.344 11.357 1.00 62.84 C HETATM 134 O3' OHU A 7 27.527 5.139 12.157 1.00 65.47 O HETATM 135 C4' OHU A 7 27.482 6.072 9.860 1.00 62.17 C HETATM 136 O4' OHU A 7 27.903 7.341 9.311 1.00 62.53 O HETATM 137 C5' OHU A 7 26.117 5.749 9.273 1.00 61.50 C HETATM 138 O5' OHU A 7 25.049 6.088 10.145 1.00 58.54 O HETATM 139 OP1 OHU A 7 22.521 6.278 10.049 1.00 67.23 O HETATM 140 OP2 OHU A 7 24.058 8.323 10.262 1.00 57.75 O ATOM 141 P DG A 8 27.042 5.172 13.702 1.00 71.13 P ATOM 142 OP1 DG A 8 26.966 3.780 14.180 1.00 77.26 O ATOM 143 OP2 DG A 8 25.868 6.059 13.869 1.00 69.83 O ATOM 144 O5' DG A 8 28.258 5.846 14.475 1.00 66.85 O ATOM 145 C5' DG A 8 29.482 5.158 14.589 1.00 66.26 C ATOM 146 C4' DG A 8 30.541 6.070 15.156 1.00 60.46 C ATOM 147 O4' DG A 8 30.858 7.090 14.188 1.00 62.08 O ATOM 148 C3' DG A 8 30.119 6.843 16.391 1.00 63.27 C ATOM 149 O3' DG A 8 30.337 6.054 17.541 1.00 72.66 O ATOM 150 C2' DG A 8 31.080 8.022 16.352 1.00 58.40 C ATOM 151 C1' DG A 8 31.158 8.305 14.859 1.00 60.51 C ATOM 152 N9 DG A 8 30.214 9.321 14.433 1.00 56.98 N ATOM 153 C8 DG A 8 28.996 9.123 13.829 1.00 64.12 C ATOM 154 N7 DG A 8 28.364 10.230 13.558 1.00 65.68 N ATOM 155 C5 DG A 8 29.216 11.227 14.022 1.00 57.64 C ATOM 156 C6 DG A 8 29.070 12.630 13.999 1.00 53.11 C ATOM 157 O6 DG A 8 28.124 13.289 13.569 1.00 54.42 O ATOM 158 N1 DG A 8 30.163 13.278 14.573 1.00 58.28 N ATOM 159 C2 DG A 8 31.265 12.637 15.102 1.00 56.24 C ATOM 160 N2 DG A 8 32.225 13.424 15.602 1.00 53.13 N ATOM 161 N3 DG A 8 31.419 11.318 15.119 1.00 53.45 N ATOM 162 C4 DG A 8 30.358 10.681 14.567 1.00 56.96 C ATOM 163 P DG A 9 29.531 6.326 18.905 1.00 69.02 P ATOM 164 OP1 DG A 9 30.280 5.504 19.872 1.00 65.47 O ATOM 165 OP2 DG A 9 28.077 6.118 18.669 1.00 64.51 O ATOM 166 O5' DG A 9 29.761 7.886 19.241 1.00 54.55 O ATOM 167 C5' DG A 9 30.791 8.257 20.120 1.00 60.61 C ATOM 168 C4' DG A 9 31.111 9.736 20.028 1.00 56.03 C ATOM 169 O4' DG A 9 30.814 10.250 18.714 1.00 56.25 O ATOM 170 C3' DG A 9 30.320 10.646 20.932 1.00 53.84 C ATOM 171 O3' DG A 9 30.793 10.532 22.263 1.00 58.31 O ATOM 172 C2' DG A 9 30.691 11.998 20.323 1.00 53.67 C ATOM 173 C1' DG A 9 30.748 11.665 18.813 1.00 55.35 C ATOM 174 N9 DG A 9 29.572 12.121 18.101 1.00 51.06 N ATOM 175 C8 DG A 9 28.557 11.344 17.607 1.00 55.91 C ATOM 176 N7 DG A 9 27.613 12.035 17.029 1.00 60.08 N ATOM 177 C5 DG A 9 28.021 13.353 17.165 1.00 55.30 C ATOM 178 C6 DG A 9 27.400 14.541 16.735 1.00 57.30 C ATOM 179 O6 DG A 9 26.329 14.667 16.133 1.00 61.86 O ATOM 180 N1 DG A 9 28.144 15.666 17.066 1.00 52.90 N ATOM 181 C2 DG A 9 29.339 15.644 17.724 1.00 52.85 C ATOM 182 N2 DG A 9 29.900 16.837 17.959 1.00 53.01 N ATOM 183 N3 DG A 9 29.940 14.532 18.138 1.00 53.75 N ATOM 184 C4 DG A 9 29.222 13.428 17.828 1.00 52.96 C ATOM 185 P DT A 10 29.839 10.861 23.515 1.00 58.28 P ATOM 186 OP1 DT A 10 30.596 10.362 24.676 1.00 63.32 O ATOM 187 OP2 DT A 10 28.444 10.438 23.262 1.00 58.81 O ATOM 188 O5' DT A 10 29.871 12.443 23.613 1.00 50.37 O ATOM 189 C5' DT A 10 31.126 13.077 23.776 1.00 58.63 C ATOM 190 C4' DT A 10 30.952 14.564 23.912 1.00 59.39 C ATOM 191 O4' DT A 10 30.379 15.101 22.686 1.00 57.97 O ATOM 192 C3' DT A 10 30.015 14.965 25.032 1.00 59.71 C ATOM 193 O3' DT A 10 30.512 16.094 25.689 1.00 64.07 O ATOM 194 C2' DT A 10 28.702 15.264 24.314 1.00 56.06 C ATOM 195 C1' DT A 10 29.185 15.796 22.975 1.00 59.77 C ATOM 196 N1 DT A 10 28.197 15.544 21.880 1.00 56.22 N ATOM 197 C2 DT A 10 27.685 16.603 21.182 1.00 52.06 C ATOM 198 O2 DT A 10 28.020 17.754 21.379 1.00 51.53 O ATOM 199 N3 DT A 10 26.760 16.263 20.228 1.00 54.86 N ATOM 200 C4 DT A 10 26.310 14.995 19.918 1.00 53.55 C ATOM 201 O4 DT A 10 25.483 14.791 19.041 1.00 59.64 O ATOM 202 C5 DT A 10 26.878 13.929 20.704 1.00 55.07 C ATOM 203 C7 DT A 10 26.461 12.512 20.467 1.00 55.48 C ATOM 204 C6 DT A 10 27.778 14.251 21.636 1.00 56.05 C ATOM 205 P DC A 11 29.864 16.525 27.091 1.00 69.59 P ATOM 206 OP1 DC A 11 30.942 17.167 27.879 1.00 66.53 O ATOM 207 OP2 DC A 11 29.178 15.320 27.617 1.00 60.37 O ATOM 208 O5' DC A 11 28.791 17.625 26.668 1.00 58.83 O ATOM 209 C5' DC A 11 29.242 18.854 26.156 1.00 59.29 C ATOM 210 C4' DC A 11 28.081 19.709 25.708 1.00 62.81 C ATOM 211 O4' DC A 11 27.441 19.100 24.559 1.00 63.70 O ATOM 212 C3' DC A 11 26.983 19.904 26.754 1.00 62.66 C ATOM 213 O3' DC A 11 26.705 21.274 26.891 1.00 76.01 O ATOM 214 C2' DC A 11 25.784 19.165 26.167 1.00 68.93 C ATOM 215 C1' DC A 11 26.055 19.267 24.678 1.00 60.23 C ATOM 216 N1 DC A 11 25.409 18.204 23.909 1.00 58.30 N ATOM 217 C2 DC A 11 24.598 18.531 22.809 1.00 58.86 C ATOM 218 O2 DC A 11 24.436 19.728 22.505 1.00 54.82 O ATOM 219 N3 DC A 11 24.006 17.522 22.113 1.00 55.94 N ATOM 220 C4 DC A 11 24.206 16.252 22.482 1.00 55.96 C ATOM 221 N4 DC A 11 23.617 15.294 21.771 1.00 51.92 N ATOM 222 C5 DC A 11 25.031 15.908 23.597 1.00 58.58 C ATOM 223 C6 DC A 11 25.602 16.905 24.275 1.00 56.73 C ATOM 224 P DC A 12 25.654 21.779 27.996 1.00 80.50 P ATOM 225 OP1 DC A 12 26.166 23.098 28.432 1.00 80.16 O ATOM 226 OP2 DC A 12 25.375 20.690 28.973 1.00 65.06 O ATOM 227 O5' DC A 12 24.312 21.997 27.165 1.00 73.04 O ATOM 228 C5' DC A 12 24.139 23.166 26.392 1.00 73.48 C ATOM 229 C4' DC A 12 22.758 23.171 25.784 1.00 71.72 C ATOM 230 O4' DC A 12 22.674 22.086 24.853 1.00 70.65 O ATOM 231 C3' DC A 12 21.645 22.900 26.778 1.00 72.86 C ATOM 232 O3' DC A 12 21.181 24.130 27.342 1.00 85.04 O ATOM 233 C2' DC A 12 20.562 22.227 25.929 1.00 68.14 C ATOM 234 C1' DC A 12 21.328 21.696 24.713 1.00 67.61 C ATOM 235 N1 DC A 12 21.287 20.211 24.550 1.00 60.67 N ATOM 236 C2 DC A 12 20.406 19.646 23.626 1.00 58.25 C ATOM 237 O2 DC A 12 19.657 20.383 22.982 1.00 61.56 O ATOM 238 N3 DC A 12 20.394 18.305 23.467 1.00 59.04 N ATOM 239 C4 DC A 12 21.216 17.541 24.180 1.00 54.42 C ATOM 240 N4 DC A 12 21.163 16.220 23.983 1.00 56.10 N ATOM 241 C5 DC A 12 22.130 18.096 25.118 1.00 59.40 C ATOM 242 C6 DC A 12 22.133 19.425 25.269 1.00 61.74 C TER 243 DC A 12 HETATM 244 CO NCO A 101 23.784 11.169 14.938 1.00108.24 CO3+ HETATM 245 N1 NCO A 101 23.219 12.028 16.631 1.00 75.91 N HETATM 246 N2 NCO A 101 24.380 10.306 13.259 1.00 67.26 N HETATM 247 N3 NCO A 101 25.042 12.655 14.586 1.00 72.48 N HETATM 248 N4 NCO A 101 25.162 10.202 15.986 1.00 76.27 N HETATM 249 N5 NCO A 101 22.533 9.663 15.242 1.00 96.83 N HETATM 250 N6 NCO A 101 22.392 12.136 13.912 1.00 86.66 N HETATM 251 CO CO A 102 16.925 15.029 9.215 1.00 99.67 CO3+ CONECT 109 121 CONECT 121 109 138 139 140 CONECT 122 123 130 131 CONECT 123 122 124 125 CONECT 124 123 CONECT 125 123 126 CONECT 126 125 127 128 CONECT 127 126 CONECT 128 126 129 130 CONECT 129 128 CONECT 130 122 128 CONECT 131 122 132 136 CONECT 132 131 133 CONECT 133 132 134 135 CONECT 134 133 141 CONECT 135 133 136 137 CONECT 136 131 135 CONECT 137 135 138 CONECT 138 121 137 CONECT 139 121 CONECT 140 121 CONECT 141 134 CONECT 244 245 246 247 248 CONECT 244 249 250 CONECT 245 244 CONECT 246 244 CONECT 247 244 CONECT 248 244 CONECT 249 244 CONECT 250 244 MASTER 207 0 3 0 0 0 0 6 250 1 30 1 END