HEADER    HYDROLASE (O-GLYCOSYL)                  15-MAR-95   1GBS               
TITLE     CRYSTAL STRUCTURE OF BLACK SWAN GOOSE-TYPE LYSOZYME AT 1.8             
TITLE    2 ANGSTROMS RESOLUTION                                                  
COMPND    MOL_ID: 1;                                                             
COMPND   2 MOLECULE: AUSTRALIAN BLACK SWAN EGG WHITE LYSOZYME;                   
COMPND   3 CHAIN: A;                                                             
COMPND   4 EC: 3.2.1.17;                                                         
COMPND   5 ENGINEERED: YES                                                       
SOURCE    MOL_ID: 1;                                                             
SOURCE   2 ORGANISM_SCIENTIFIC: CYGNUS ATRATUS;                                  
SOURCE   3 ORGANISM_COMMON: BLACK SWAN;                                          
SOURCE   4 ORGANISM_TAXID: 8868                                                  
KEYWDS    HYDROLASE (O-GLYCOSYL)                                                 
EXPDTA    X-RAY DIFFRACTION                                                      
AUTHOR    Z.RAO,K.MACHIN,N.ISAACS                                                
REVDAT   2   24-FEB-09 1GBS    1       VERSN                                     
REVDAT   1   10-JUL-95 1GBS    0                                                 
JRNL        AUTH   Z.RAO,R.ESNOUF,N.ISAACS,D.STUART                              
JRNL        TITL   A STRATEGY FOR RAPID AND EFFECTIVE REFINEMENT                 
JRNL        TITL 2 APPLIED TO BLACK SWAN LYSOZYME.                               
JRNL        REF    ACTA CRYSTALLOGR.,SECT.D      V.  51   331 1995               
JRNL        REFN                   ISSN 0907-4449                                
JRNL        PMID   15299299                                                      
JRNL        DOI    10.1107/S0907444994009893                                     
REMARK   1                                                                       
REMARK   1 REFERENCE 1                                                           
REMARK   1  AUTH   Z.RAO,R.ESNOUF,N.ISAACS,D.STUART                              
REMARK   1  TITL   A STRATEGY FOR RAPID AND EFFECTIVE REFINEMENT                 
REMARK   1  TITL 2 APPLIED TO BLACK SWAN LYSOZYME                                
REMARK   1  REF    ACTA CRYSTALLOGR.,SECT.D      V.  51   331 1995               
REMARK   1  REFN                   ISSN 0907-4449                                
REMARK   1 REFERENCE 2                                                           
REMARK   1  AUTH   Z.RAO                                                         
REMARK   1  TITL   STRUCTURE DETERMINATION AND REFINEMENT OF THE                 
REMARK   1  TITL 2 GOOSE-TYPE LYSOZYME FROM THE BLACK SWAN                       
REMARK   1  REF    THESIS, UNIVERSITY OF                      1989               
REMARK   1  REF  2 MELBOURNE                                                     
REMARK   1  REFN                   ISSN 1043-1802                                
REMARK   1 REFERENCE 3                                                           
REMARK   1  AUTH   N.ISAACS,K.MACHIN,M.MASAKUNO                                  
REMARK   1  TITL   STRUCTURE OF A G-TYPE GOOSE_TYPE LYSOZYME AT 2.5              
REMARK   1  TITL 2 ANGSTROMS RESOLUTION                                          
REMARK   1  REF    AUST.J.BIOL.SCI.              V.  38    13 1985               
REMARK   1  REFN                   ISSN 0004-9417                                
REMARK   2                                                                       
REMARK   2 RESOLUTION.    1.50 ANGSTROMS.                                        
REMARK   3                                                                       
REMARK   3 REFINEMENT.                                                           
REMARK   3   PROGRAM     : X-PLOR, PROTEIN, CCP4                                 
REMARK   3   AUTHORS     : NULL                                                  
REMARK   3                                                                       
REMARK   3  DATA USED IN REFINEMENT.                                             
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50                            
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 20.00                           
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                            
REMARK   3   COMPLETENESS FOR RANGE        (%) : 95.0                            
REMARK   3   NUMBER OF REFLECTIONS             : 19189                           
REMARK   3                                                                       
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                      
REMARK   3   CROSS-VALIDATION METHOD          : NULL                             
REMARK   3   FREE R VALUE TEST SET SELECTION  : NULL                             
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.184                            
REMARK   3   R VALUE            (WORKING SET) : 0.184                            
REMARK   3   FREE R VALUE                     : NULL                             
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                             
REMARK   3   FREE R VALUE TEST SET COUNT      : NULL                             
REMARK   3                                                                       
REMARK   3  FIT/AGREEMENT OF MODEL WITH ALL DATA.                                
REMARK   3   R VALUE   (WORKING + TEST SET, NO CUTOFF) : NULL                    
REMARK   3   R VALUE          (WORKING SET, NO CUTOFF) : NULL                    
REMARK   3   FREE R VALUE                  (NO CUTOFF) : NULL                    
REMARK   3   FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL                    
REMARK   3   FREE R VALUE TEST SET COUNT   (NO CUTOFF) : NULL                    
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (NO CUTOFF) : NULL                    
REMARK   3                                                                       
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                     
REMARK   3   PROTEIN ATOMS            : 1434                                     
REMARK   3   NUCLEIC ACID ATOMS       : 0                                        
REMARK   3   HETEROGEN ATOMS          : 0                                        
REMARK   3   SOLVENT ATOMS            : 152                                      
REMARK   3                                                                       
REMARK   3  B VALUES.                                                            
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                            
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                            
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                        
REMARK   3    B11 (A**2) : NULL                                                  
REMARK   3    B22 (A**2) : NULL                                                  
REMARK   3    B33 (A**2) : NULL                                                  
REMARK   3    B12 (A**2) : NULL                                                  
REMARK   3    B13 (A**2) : NULL                                                  
REMARK   3    B23 (A**2) : NULL                                                  
REMARK   3                                                                       
REMARK   3  ESTIMATED COORDINATE ERROR.                                          
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL                             
REMARK   3   ESD FROM SIGMAA              (A) : NULL                             
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                             
REMARK   3                                                                       
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                    
REMARK   3   DISTANCE RESTRAINTS.                    RMS    SIGMA                
REMARK   3    BOND LENGTH                     (A) : NULL  ; NULL                 
REMARK   3    ANGLE DISTANCE                  (A) : NULL  ; NULL                 
REMARK   3    INTRAPLANAR 1-4 DISTANCE        (A) : NULL  ; NULL                 
REMARK   3    H-BOND OR METAL COORDINATION    (A) : NULL  ; NULL                 
REMARK   3                                                                       
REMARK   3   PLANE RESTRAINT                  (A) : NULL  ; NULL                 
REMARK   3   CHIRAL-CENTER RESTRAINT       (A**3) : NULL  ; NULL                 
REMARK   3                                                                       
REMARK   3   NON-BONDED CONTACT RESTRAINTS.                                      
REMARK   3    SINGLE TORSION                  (A) : NULL  ; NULL                 
REMARK   3    MULTIPLE TORSION                (A) : NULL  ; NULL                 
REMARK   3    H-BOND (X...Y)                  (A) : NULL  ; NULL                 
REMARK   3    H-BOND (X-H...Y)                (A) : NULL  ; NULL                 
REMARK   3                                                                       
REMARK   3   CONFORMATIONAL TORSION ANGLE RESTRAINTS.                            
REMARK   3    SPECIFIED                 (DEGREES) : NULL  ; NULL                 
REMARK   3    PLANAR                    (DEGREES) : NULL  ; NULL                 
REMARK   3    STAGGERED                 (DEGREES) : NULL  ; NULL                 
REMARK   3    TRANSVERSE                (DEGREES) : NULL  ; NULL                 
REMARK   3                                                                       
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                 
REMARK   3   MAIN-CHAIN BOND               (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND               (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE              (A**2) : NULL  ; NULL                 
REMARK   3                                                                       
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                       
REMARK   4                                                                       
REMARK   4 1GBS COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                          
REMARK 100                                                                       
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.                                 
REMARK 200                                                                       
REMARK 200 EXPERIMENTAL DETAILS                                                  
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                   
REMARK 200  DATE OF DATA COLLECTION        : NULL                                
REMARK 200  TEMPERATURE           (KELVIN) : NULL                                
REMARK 200  PH                             : NULL                                
REMARK 200  NUMBER OF CRYSTALS USED        : NULL                                
REMARK 200                                                                       
REMARK 200  SYNCHROTRON              (Y/N) : NULL                                
REMARK 200  RADIATION SOURCE               : NULL                                
REMARK 200  BEAMLINE                       : NULL                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                                
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : NULL                                
REMARK 200  WAVELENGTH OR RANGE        (A) : NULL                                
REMARK 200  MONOCHROMATOR                  : NULL                                
REMARK 200  OPTICS                         : NULL                                
REMARK 200                                                                       
REMARK 200  DETECTOR TYPE                  : NULL                                
REMARK 200  DETECTOR MANUFACTURER          : NULL                                
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : NULL                                
REMARK 200  DATA SCALING SOFTWARE          : NULL                                
REMARK 200                                                                       
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 19189                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.800                               
REMARK 200  RESOLUTION RANGE LOW       (A) : 20.000                              
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                               
REMARK 200                                                                       
REMARK 200 OVERALL.                                                              
REMARK 200  COMPLETENESS FOR RANGE     (%) : 95.0                                
REMARK 200  DATA REDUNDANCY                : NULL                                
REMARK 200  R MERGE                    (I) : NULL                                
REMARK 200  R SYM                      (I) : NULL                                
REMARK 200   FOR THE DATA SET  : NULL                                
REMARK 200                                                                       
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                      
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL                      
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                      
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                                
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                                
REMARK 200  R MERGE FOR SHELL          (I) : NULL                                
REMARK 200  R SYM FOR SHELL            (I) : NULL                                
REMARK 200   FOR SHELL         : NULL                                
REMARK 200                                                                       
REMARK 200 DIFFRACTION PROTOCOL: NULL                                            
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL                          
REMARK 200 SOFTWARE USED: X-PLOR                                                 
REMARK 200 STARTING MODEL: NULL                                                  
REMARK 200                                                                       
REMARK 200 REMARK: NULL                                                          
REMARK 280                                                                       
REMARK 280 CRYSTAL                                                               
REMARK 280 SOLVENT CONTENT, VS   (%): 56.83                                      
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85                      
REMARK 280                                                                       
REMARK 280 CRYSTALLIZATION CONDITIONS: NULL                                      
REMARK 290                                                                       
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                             
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2                         
REMARK 290                                                                       
REMARK 290      SYMOP   SYMMETRY                                                 
REMARK 290     NNNMMM   OPERATOR                                                 
REMARK 290       1555   X,Y,Z                                                    
REMARK 290       2555   -X,-Y,Z                                                  
REMARK 290       3555   -X+1/2,Y+1/2,-Z                                          
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                          
REMARK 290                                                                       
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                      
REMARK 290           MMM -> TRANSLATION VECTOR                                   
REMARK 290                                                                       
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                             
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM              
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                 
REMARK 290 RELATED MOLECULES.                                                    
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000             
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000             
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000             
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000             
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000             
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000        0.00000             
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000       45.90000             
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       32.70000             
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000        0.00000             
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       45.90000             
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       32.70000             
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000             
REMARK 290                                                                       
REMARK 290 REMARK: NULL                                                          
REMARK 300                                                                       
REMARK 300 BIOMOLECULE: 1                                                        
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                 
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                   
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON                
REMARK 300 BURIED SURFACE AREA.                                                  
REMARK 350                                                                       
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN            
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                 
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS           
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                           
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                                
REMARK 350                                                                       
REMARK 350 BIOMOLECULE: 1                                                        
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                          
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                      
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000             
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000             
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000             
REMARK 500                                                                       
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                          
REMARK 500 SUBTOPIC: TORSION ANGLES                                              
REMARK 500                                                                       
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:             
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                              
REMARK 500                                                                       
REMARK 500 STANDARD TABLE:                                                       
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                     
REMARK 500                                                                       
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-            
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400             
REMARK 500                                                                       
REMARK 500  M RES CSSEQI        PSI       PHI                                    
REMARK 500    CYS A  29     -165.34   -126.70                                    
REMARK 500    ASP A 168       16.84   -150.51                                    
REMARK 500                                                                       
REMARK 500 REMARK: NULL                                                          
DBREF  1GBS A    1   185  UNP    P00717   LYG_CYGAT        1    185              
SEQRES   1 A  185  ARG THR ASP CYS TYR GLY ASN VAL ASN ARG ILE ASP THR           
SEQRES   2 A  185  THR GLY ALA SER CYS LYS THR ALA LYS PRO GLU GLY LEU           
SEQRES   3 A  185  SER TYR CYS GLY VAL PRO ALA SER LYS THR ILE ALA GLU           
SEQRES   4 A  185  ARG ASP LEU LYS ALA MET ASP ARG TYR LYS THR ILE ILE           
SEQRES   5 A  185  LYS LYS VAL GLY GLU LYS LEU CYS VAL GLU PRO ALA VAL           
SEQRES   6 A  185  ILE ALA GLY ILE ILE SER ARG GLU SER HIS ALA GLY LYS           
SEQRES   7 A  185  VAL LEU LYS ASN GLY TRP GLY ASP ARG GLY ASN GLY PHE           
SEQRES   8 A  185  GLY LEU MET GLN VAL ASP LYS ARG SER HIS LYS PRO GLN           
SEQRES   9 A  185  GLY THR TRP ASN GLY GLU VAL HIS ILE THR GLN GLY THR           
SEQRES  10 A  185  THR ILE LEU THR ASP PHE ILE LYS ARG ILE GLN LYS LYS           
SEQRES  11 A  185  PHE PRO SER TRP THR LYS ASP GLN GLN LEU LYS GLY GLY           
SEQRES  12 A  185  ILE SER ALA TYR ASN ALA GLY ALA GLY ASN VAL ARG SER           
SEQRES  13 A  185  TYR ALA ARG MET ASP ILE GLY THR THR HIS ASP ASP TYR           
SEQRES  14 A  185  ALA ASN ASP VAL VAL ALA ARG ALA GLN TYR TYR LYS GLN           
SEQRES  15 A  185  HIS GLY TYR                                                   
FORMUL   2  HOH   *152(H2 O)                                                     
HELIX    1   1 VAL A    8  ARG A   10  5                                   3     
HELIX    2   2 CYS A   18  GLU A   24  1                                   7     
HELIX    3   3 GLY A   30  ARG A   47  1                                  18     
HELIX    4   4 LYS A   49  LEU A   59  1                                  11     
HELIX    5   5 PRO A   63  SER A   74  1                                  12     
HELIX    6   6 GLU A  110  LYS A  130  1                                  21     
HELIX    7   7 LYS A  136  ALA A  149  1                                  14     
HELIX    8   8 ALA A  151  ASN A  153  5                                   3     
HELIX    9   9 THR A  165  ASP A  167  5                                   3     
HELIX   10  10 TYR A  169  GLN A  182  1                                  14     
SHEET    1   A 2 GLY A  90  PHE A  91  0                                         
SHEET    2   A 2 VAL A  96  ASP A  97 -1  O  VAL A  96   N  PHE A  91            
SSBOND   1 CYS A    4    CYS A   60                          1555   1555  2.04   
SSBOND   2 CYS A   18    CYS A   29                          1555   1555  2.04   
CRYST1   91.800   65.400   38.800  90.00  90.00  90.00 P 21 21 2     4           
ORIGX1      1.000000  0.000000  0.000000        0.00000                          
ORIGX2      0.000000  1.000000  0.000000        0.00000                          
ORIGX3      0.000000  0.000000  1.000000        0.00000                          
SCALE1      0.010893  0.000000  0.000000        0.00000                          
SCALE2      0.000000  0.015291  0.000000        0.00000                          
SCALE3      0.000000  0.000000  0.025773        0.00000                          
END