HEADER    LIPOPROTEIN                             14-MAR-08   2K1S               
TITLE     SOLUTION NMR STRUCTURE OF THE FOLDED C-TERMINAL FRAGMENT OF YIAD FROM  
TITLE    2 ESCHERICHIA COLI. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET     
TITLE    3 ER553.                                                                
COMPND    MOL_ID: 1;                                                             
COMPND   2 MOLECULE: INNER MEMBRANE LIPOPROTEIN YIAD;                            
COMPND   3 CHAIN: A;                                                             
COMPND   4 FRAGMENT: C-TERMINAL RESIDUES 79-219;                                 
COMPND   5 ENGINEERED: YES                                                       
SOURCE    MOL_ID: 1;                                                             
SOURCE   2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;                                
SOURCE   3 ORGANISM_TAXID: 83333;                                                
SOURCE   4 STRAIN: K12;                                                          
SOURCE   5 GENE: YIAD, B3552, JW5657;                                            
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                  
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                         
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PMGK;                             
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                               
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET21                                      
KEYWDS    ABBABABAB, OMPA, LIPOPROTEIN, ALPHA BETA, INNER MEMBRANE, MEMBRANE,    
KEYWDS   2 PALMITATE, TRANSMEMBRANE, STRUCTURAL GENOMICS, PSI-2, PROTEIN         
KEYWDS   3 STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG  
EXPDTA    SOLUTION NMR                                                           
NUMMDL    20                                                                     
AUTHOR    T.A.RAMELOT,L.ZHAO,K.HAMILTON,M.MAGLAQUI,R.XIAO,J.LIU,M.C.BARAN,       
AUTHOR   2 G.SWAPNA,T.B.ACTON,B.ROST,G.T.MONTELIONE,M.A.KENNEDY,NORTHEAST        
AUTHOR   3 STRUCTURAL GENOMICS CONSORTIUM (NESG)                                 
REVDAT   4   19-FEB-20 2K1S    1       REMARK SEQADV                             
REVDAT   3   13-JUL-11 2K1S    1       VERSN                                     
REVDAT   2   24-FEB-09 2K1S    1       VERSN                                     
REVDAT   1   13-MAY-08 2K1S    0                                                 
JRNL        AUTH   T.A.RAMELOT,L.ZHAO,K.HAMILTON,M.MAGLAQUI,R.XIAO,J.LIU,        
JRNL        AUTH 2 M.C.BARAN,G.SWAPNA,T.B.ACTON,B.ROST,G.T.MONTELIONE,           
JRNL        AUTH 3 M.A.KENNEDY                                                   
JRNL        TITL   SOLUTION NMR STRUCTURE OF THE FOLDED C-TERMINAL FRAGMENT OF   
JRNL        TITL 2 YIAD FROM ESCHERICHIA COLI. NORTHEAST STRUCTURAL GENOMICS     
JRNL        TITL 3 CONSORTIUM TARGET ER553.                                      
JRNL        REF    TO BE PUBLISHED                                               
JRNL        REFN                                                                 
REMARK   2                                                                       
REMARK   2 RESOLUTION. NOT APPLICABLE.                                           
REMARK   3                                                                       
REMARK   3 REFINEMENT.                                                           
REMARK   3   PROGRAM     : NMRPIPE LINUX9, CNS 1.1                               
REMARK   3   AUTHORS     : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX     
REMARK   3                 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND    
REMARK   3                 READ (CNS)                                            
REMARK   3                                                                       
REMARK   3  OTHER REFINEMENT REMARKS: XPLOR-NIH AND CNS WATER REFINEMENT         
REMARK   4                                                                       
REMARK   4 2K1S COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                          
REMARK 100                                                                       
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAR-08.                   
REMARK 100 THE DEPOSITION ID IS D_1000100567.                                    
REMARK 210                                                                       
REMARK 210 EXPERIMENTAL DETAILS                                                  
REMARK 210  EXPERIMENT TYPE                : NMR                                 
REMARK 210  TEMPERATURE           (KELVIN) : 293                                 
REMARK 210  PH                             : 6.5                                 
REMARK 210  IONIC STRENGTH                 : 0.1                                 
REMARK 210  PRESSURE                       : AMBIENT                             
REMARK 210  SAMPLE CONTENTS                : 1.9 MM [U-100% 13C; U-100% 15N]     
REMARK 210                                   YIAD PROTEIN, 20 MM MES, 100 MM     
REMARK 210                                   SODIUM CHLORIDE, 5 MM CALCIUM       
REMARK 210                                   CHLORIDE, 10 MM DTT, 0.02 %         
REMARK 210                                   SODIUM AZIDE, 90% H2O/10% D2O;      
REMARK 210                                   1.3 MM [U-5% 13C; U-100% 15N]       
REMARK 210                                   YIAD PROTEIN, 20 MM MES, 100 MM     
REMARK 210                                   SODIUM CHLORIDE, 5 MM CALCIUM       
REMARK 210                                   CHLORIDE, 10 MM DTT, 0.02 %         
REMARK 210                                   SODIUM AZIDE, 90% H2O/10% D2O;      
REMARK 210                                   1.9 MM [U-100% 13C; U-100% 15N]     
REMARK 210                                   YIAD PROTEIN, 20 MM MES, 100 MM     
REMARK 210                                   SODIUM CHLORIDE, 5 MM CALCIUM       
REMARK 210                                   CHLORIDE, 10 MM DTT, 0.02 %         
REMARK 210                                   SODIUM AZIDE, 100% D2O              
REMARK 210                                                                       
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 2D 1H-13C HSQC;     
REMARK 210                                   3D 1H-15N NOESY; 3D 1H-13C NOESY;   
REMARK 210                                   3D HNCO; 3D HNCA; 3D HN(CO)CA;      
REMARK 210                                   3D HNCACB; 3D CBCA(CO)NH; 3D        
REMARK 210                                   C(CO)NH; 3D HBHA(CO)NH; 3D H(CCO)   
REMARK 210                                   NH; 3D HCCH-TOCSY; 3D HCCH-COSY;    
REMARK 210                                   4D CC NOESY                         
REMARK 210  SPECTROMETER FIELD STRENGTH    : 600 MHZ; 850 MHZ                    
REMARK 210  SPECTROMETER MODEL             : INOVA; AVANCE III                   
REMARK 210  SPECTROMETER MANUFACTURER      : VARIAN; BRUKER                      
REMARK 210                                                                       
REMARK 210  STRUCTURE DETERMINATION.                                             
REMARK 210   SOFTWARE USED                 : VNMR 6.1C, TOPSPIN 2.1,             
REMARK 210                                   AUTOSTRUCTURE 2.1.1, X-PLOR NIH     
REMARK 210                                   2.15.0, SPARKY 3.113, PSVS 1.3,     
REMARK 210                                   AUTOASSIGN                          
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                 
REMARK 210                                                                       
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 150                                 
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                  
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LEAST           
REMARK 210                                   RESTRAINT VIOLATIONS                
REMARK 210                                                                       
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                    
REMARK 210                                                                       
REMARK 210 REMARK: NULL                                                          
REMARK 215                                                                       
REMARK 215 NMR STUDY                                                             
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION            
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                 
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON               
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                        
REMARK 300                                                                       
REMARK 300 BIOMOLECULE: 1                                                        
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                 
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                   
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON                
REMARK 300 BURIED SURFACE AREA.                                                  
REMARK 350                                                                       
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN            
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                 
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS           
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                           
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                                
REMARK 350                                                                       
REMARK 350 BIOMOLECULE: 1                                                        
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                          
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                      
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000             
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000             
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000             
REMARK 500                                                                       
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                          
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                              
REMARK 500                                                                       
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                             
REMARK 500                                                                       
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE           
REMARK 500   HZ3  LYS A     9     OE1  GLU A    62              1.58             
REMARK 500                                                                       
REMARK 500 REMARK: NULL                                                          
REMARK 500                                                                       
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                          
REMARK 500 SUBTOPIC: TORSION ANGLES                                              
REMARK 500                                                                       
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:             
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                              
REMARK 500                                                                       
REMARK 500 STANDARD TABLE:                                                       
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                     
REMARK 500                                                                       
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-            
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400             
REMARK 500                                                                       
REMARK 500  M RES CSSEQI        PSI       PHI                                    
REMARK 500  1 TYR A   2      -44.43     74.78                                    
REMARK 500  1 ASP A  39      -77.30    -75.64                                    
REMARK 500  1 SER A  40      -71.81    -95.82                                    
REMARK 500  1 SER A  41      -42.79   -155.21                                    
REMARK 500  1 ALA A  43       95.46    -66.86                                    
REMARK 500  1 THR A  74      148.31   -171.42                                    
REMARK 500  1 PRO A 115       34.77    -78.44                                    
REMARK 500  1 ALA A 116      -62.51   -109.53                                    
REMARK 500  1 LEU A 141      109.47    -55.59                                    
REMARK 500  1 GLU A 143       95.42     58.98                                    
REMARK 500  2 MET A   3      -55.64     74.03                                    
REMARK 500  2 MET A  14       32.03    -88.22                                    
REMARK 500  2 ARG A  15      106.29    -56.30                                    
REMARK 500  2 ASP A  26      -44.44     74.03                                    
REMARK 500  2 SER A  42     -173.27     56.06                                    
REMARK 500  2 ALA A  43      -49.99     71.01                                    
REMARK 500  2 PRO A  64       33.40    -88.40                                    
REMARK 500  2 ASP A  75     -157.36   -104.89                                    
REMARK 500  2 PRO A 115       35.91    -76.42                                    
REMARK 500  2 ASN A 117       71.00     54.59                                    
REMARK 500  2 HIS A 147      -94.60   -128.46                                    
REMARK 500  3 PHE A  38     -157.66   -113.01                                    
REMARK 500  3 PRO A  64       29.15    -79.83                                    
REMARK 500  3 THR A  74      119.66    175.93                                    
REMARK 500  3 SER A  76       74.52    -69.90                                    
REMARK 500  3 PRO A 115       33.30    -81.07                                    
REMARK 500  3 SER A 121      106.90    -56.20                                    
REMARK 500  3 LEU A 141      -90.15    -83.44                                    
REMARK 500  3 LEU A 142     -157.02     57.15                                    
REMARK 500  3 GLU A 143     -167.39     62.87                                    
REMARK 500  3 HIS A 144      -64.78     70.83                                    
REMARK 500  4 MET A   3      -39.17     75.04                                    
REMARK 500  4 SER A  41     -169.34   -126.67                                    
REMARK 500  4 SER A  42     -163.03     61.87                                    
REMARK 500  4 THR A  74     -166.06   -171.68                                    
REMARK 500  4 ASP A  75     -163.96   -113.52                                    
REMARK 500  4 LEU A 113       86.92     63.34                                    
REMARK 500  4 PRO A 115       41.99    -84.56                                    
REMARK 500  4 ASN A 117       87.33     69.12                                    
REMARK 500  4 HIS A 146      -70.50    -90.06                                    
REMARK 500  4 HIS A 147      -97.87     55.89                                    
REMARK 500  4 HIS A 148      -52.31    167.01                                    
REMARK 500  5 ASP A  39      -86.17    -48.68                                    
REMARK 500  5 SER A  40      -65.58    -98.71                                    
REMARK 500  5 SER A  41       18.89   -159.38                                    
REMARK 500  5 ASN A 117       88.52     64.22                                    
REMARK 500  5 HIS A 144      -70.13   -141.96                                    
REMARK 500  5 HIS A 145       52.98     39.46                                    
REMARK 500  5 HIS A 146      -96.21     60.81                                    
REMARK 500  5 HIS A 147       94.19    177.50                                    
REMARK 500                                                                       
REMARK 500 THIS ENTRY HAS     167 RAMACHANDRAN OUTLIERS.                         
REMARK 500                                                                       
REMARK 500 REMARK: NULL                                                          
REMARK 900                                                                       
REMARK 900 RELATED ENTRIES                                                       
REMARK 900 RELATED ID: ER553   RELATED DB: TARGETDB                              
REMARK 900 RELATED ID: 15683   RELATED DB: BMRB                                  
DBREF  2K1S A    1   141  UNP    P37665   YIAD_ECOLI      79    219              
SEQADV 2K1S LEU A  142  UNP  P37665              EXPRESSION TAG                  
SEQADV 2K1S GLU A  143  UNP  P37665              EXPRESSION TAG                  
SEQADV 2K1S HIS A  144  UNP  P37665              EXPRESSION TAG                  
SEQADV 2K1S HIS A  145  UNP  P37665              EXPRESSION TAG                  
SEQADV 2K1S HIS A  146  UNP  P37665              EXPRESSION TAG                  
SEQADV 2K1S HIS A  147  UNP  P37665              EXPRESSION TAG                  
SEQADV 2K1S HIS A  148  UNP  P37665              EXPRESSION TAG                  
SEQADV 2K1S HIS A  149  UNP  P37665              EXPRESSION TAG                  
SEQRES   1 A  149  TYR TYR MET ASP VAL GLN GLU ALA LYS LEU ARG ASP LYS           
SEQRES   2 A  149  MET ARG GLY THR GLY VAL SER VAL THR ARG SER GLY ASP           
SEQRES   3 A  149  ASN ILE ILE LEU ASN MET PRO ASN ASN VAL THR PHE ASP           
SEQRES   4 A  149  SER SER SER ALA THR LEU LYS PRO ALA GLY ALA ASN THR           
SEQRES   5 A  149  LEU THR GLY VAL ALA MET VAL LEU LYS GLU TYR PRO LYS           
SEQRES   6 A  149  THR ALA VAL ASN VAL ILE GLY TYR THR ASP SER THR GLY           
SEQRES   7 A  149  GLY HIS ASP LEU ASN MET ARG LEU SER GLN GLN ARG ALA           
SEQRES   8 A  149  ASP SER VAL ALA SER ALA LEU ILE THR GLN GLY VAL ASP           
SEQRES   9 A  149  ALA SER ARG ILE ARG THR GLN GLY LEU GLY PRO ALA ASN           
SEQRES  10 A  149  PRO ILE ALA SER ASN SER THR ALA GLU GLY LYS ALA GLN           
SEQRES  11 A  149  ASN ARG ARG VAL GLU ILE THR LEU SER PRO LEU LEU GLU           
SEQRES  12 A  149  HIS HIS HIS HIS HIS HIS                                       
HELIX    1   1 MET A    3  MET A   14  1                                  12     
HELIX    2   2 ASN A   34  PHE A   38  1                                   5     
HELIX    3   3 LYS A   46  TYR A   63  1                                  18     
HELIX    4   4 GLY A   79  GLY A  102  1                                  24     
HELIX    5   5 ASP A  104  SER A  106  5                                   3     
HELIX    6   6 THR A  124  ARG A  132  1                                   9     
SHEET    1   A 5 SER A  20  SER A  24  0                                         
SHEET    2   A 5 ASN A  27  PRO A  33 -1  O  ILE A  29   N  THR A  22            
SHEET    3   A 5 ARG A 133  PRO A 140 -1  O  VAL A 134   N  MET A  32            
SHEET    4   A 5 THR A  66  TYR A  73 -1  N  ALA A  67   O  SER A 139            
SHEET    5   A 5 ILE A 108  GLY A 112  1  O  ARG A 109   N  VAL A  70            
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1           
ORIGX1      1.000000  0.000000  0.000000        0.00000                          
ORIGX2      0.000000  1.000000  0.000000        0.00000                          
ORIGX3      0.000000  0.000000  1.000000        0.00000                          
SCALE1      1.000000  0.000000  0.000000        0.00000                          
SCALE2      0.000000  1.000000  0.000000        0.00000                          
SCALE3      0.000000  0.000000  1.000000        0.00000                          
MODEL        1                                                                   
MODEL        2                                                                   
MODEL        3                                                                   
MODEL        4                                                                   
MODEL        5                                                                   
MODEL        6                                                                   
MODEL        7                                                                   
MODEL        8                                                                   
MODEL        9                                                                   
MODEL       10                                                                   
MODEL       11                                                                   
MODEL       12                                                                   
MODEL       13                                                                   
MODEL       14                                                                   
MODEL       15                                                                   
MODEL       16                                                                   
MODEL       17                                                                   
MODEL       18                                                                   
MODEL       19                                                                   
MODEL       20                                                                   
END