The input data for STRALCP processing is composed from the STRALCP parameters and the list of PDB structures (chains).
Parameters for STRALCP calculations:
Up to three LGA_S parameters can be specified in this box (using space ' ' as a separator). For example: 50 60 70
The value of LGA_S = 60 is recomended as a default parameter for STRALCP calculations. This parameter defines the level of overall structure similarity between structures that can be clustered together. By lowering or increasing this parameter (0 < LGA_S < 100) user can allow groupping within one cluster more or less structures that are structurally similar in calculated pairwise comparisons.
PDB list of models:
The list of PDB structures has to be prepared in the following format:
PDB_entry [Name [Class [Parameters]]]
where: PDB_entry - PDB code (entry) of the chain from PDB, or local structure
Name - name you would like to use on the plot (optional)
Class - additional comment (e.g. class from SCOP) (optional)
Parameters - LGA parameters for particular molecule (e.g. selected range
or chain) (optional)
For information about "LGA parameters" please check LGA parameters.
In your list you can combine the following formats:
PDB_entry
or
PDB_entry Name
or
PDB_entry Name Class
or
PDB_entry Name Class Parameters
Please make sure that you select PDB entry (chains, domains) correctly.
Otherwise NO RESULTS will be calculated.
PDB_entry has to be in the following format:
1cpi_A for PDB entry: 1cpi, chain: 'A'
1akf for PDB entry: 1akf, chain: ' '
1ggg* for PDB entry: 1ggg, all existing chains are selected (chain 'A' and 'B')
or specifying NMR MODEL:
1bve_B_5 for PDB entry: 1bve, chain: 'B', model: 5
1rel___4 for PDB entry: 1rel, chain: ' ', model: 4
There are several ways how to select from given structures the set
of residues for calculations.
Here are some examples:
-ch1:B - chain B from molecule1 is selected
-er1:B:B - chain B from molecule1 is selected
-aa1:1:317 - residues 1 till 317 from molecule1
-gap1:152:156 - remove residues 152 - 156 from molecule1
-aa1:45:361 - residues 45 till 361 from molecule1
-er1:45_B:50_B - residues 45 till 50 from molecule1 chain B
-er1:7S_B:7_C,12_C:49_C - selects two ranges in molecule1: the residues 7S_B (residue 7
insertion S from chain B) up to 7_C (residue 7 from chain C)
and residues 12 till 49 from chain C
Example1 (simple; selected chains):
1wdn_A
1gnp_A
5p21_A
1ii5_A
Example2 (advanced; with selected chains and ranges):
5p21_A unique_name
1ii5_A 1ii5_chain_A class
1gnp_A 1gnp_gaps c.37.1.8 -er1:10_A:30_A,60_A:70_A,90_A:100_A
1wdn_A 1wdn_A_12_60 c.94.1.1 -er1:12_A:60_A
1wdn_A 1wdn_A_70_120 c.94.1.1 -er1:70_A:120_A
1wdn_A 1wdn_A_121_170 c.94.1.1 -er1:121_A:170_A
1qd6* d1qd6_1 f.4.2.1 -er1:A:A -er1:C:C
1o7d* d1o7d_1 a.8.3.1 -er1:385_B:421_B -er1:431_C:487_C
Examples of STRALCP calculations on selected Folds from SCOP: STRALCP_SCOP
Complete example of STRALCP calculations:
STRALCP parameter: 60
Input list of SCOP domains:
1tf0_B d1tf0b_ a.8.1.2
1gab_A d1gab__ a.8.1.2
1prb_A d1prb__ a.8.1.2
1gjt_A d1gjta_ a.8.1.2
1gjs_A d1gjsa_ a.8.1.2
1gvn_A d1gvna_ a.8.2.1
1gvn_C d1gvnc_ a.8.2.1
1k1x_A d1k1xa1 a.8.3.2 -er1:311_A:384_A
1k1x_B d1k1xb1 a.8.3.2 -er1:311_B:384_B
1k1y_A d1k1ya1 a.8.3.2 -er1:311_A:384_A
1k1y_B d1k1yb1 a.8.3.2 -er1:311_B:384_B
1k1w_A d1k1wa1 a.8.3.2 -er1:311_A:384_A
The output from STRALCP calculations (Clustering results: STRALCP_results.STRALCP_test_ws18211_1):
STRALCP - Structure Alignment-based Clustering of Proteins (based on Conserved Structural Spans).
Version: (01/21/2006)
Questions or comments please send to Adam Zemla (adamz@llnl.gov)
Parameters for the clustering program:
Length of slots: 10 (empty: 0.20 boundaries: 0.20)
Length of spans: 3
Cutoff for LGA_S score: 60.00 (refinement: 0.20)
STRALCP data: TMP
List of molecules: STRALCP_test_ws18211_L1
Name: d1tf0b_ a.8.1.2 53 1
Name: d1gab__ a.8.1.2 53 2
Name: d1prb__ a.8.1.2 53 3
Name: d1gjta_ a.8.1.2 65 4
Name: d1gjsa_ a.8.1.2 65 5
Name: d1gvna_ a.8.2.1 87 6
Name: d1gvnc_ a.8.2.1 85 7
Name: d1k1xa1 a.8.3.2 74 8
Name: d1k1xb1 a.8.3.2 74 9
Name: d1k1ya1 a.8.3.2 74 10
Name: d1k1yb1 a.8.3.2 74 11
Name: d1k1wa1 a.8.3.2 74 12
Total number of members: 12
.......
CLUSTER_NB: 1
Nb_of_members(1): 5
Reference_name: d1k1xa1
Length: 74
Nb_of_matches: 70
Nb_of_spans: 2
Nb_of_slots: 8
Cluster Name Class #################################################..#####################
Cluster:1 d1k1xa1 a.8.3.2 IWKNFFFKYPESNFMHKRMLMVSKAVRDNPEARKYILKAQCNDAYWHGV..GIYLPHLRRTVWENIIKAQRY
Cluster:1 d1k1xb1 a.8.3.2 IWKNFFFKYPESNFMHKRMLMVSKAVRDNPEARKYILKAQCNDAYWHGV..GIYLPHLRRTVWENIIKAQRY
Cluster:1 d1k1ya1 a.8.3.2 IWKNFFFKYPESNFMHKRMLMVSKAVRDNPEARKYILKAQCNDAYWHGV..GIYLPHLRRTVWENIIKAQRY
Cluster:1 d1k1yb1 a.8.3.2 IWKNFFFKYPESNFMHKRMLMVSKAVRDNPEARKYILKAQCNDAYWHGV..GIYLPHLRRTVWENIIKAQRY
Cluster:1 d1k1wa1 a.8.3.2 IWKNFFFKYPESNFXHKRXLXVSKAVRDNPEARKYILKAQCNDAYWHGV..GIYLPHLRRTVWENIIKAQRY
# STRALCP results (SPANS in common) for: d1k1xa1
d1k1xa1 2-50 312_A:360_A IWKNFFFKYPESNFMHKRMLMVSKAVRDNPEARKYILKAQCNDAYWHGV
d1k1xa1 53-73 363_A:383_A GIYLPHLRRTVWENIIKAQRY
# STRALCP results (SPANS in common) for: d1k1xb1
d1k1xb1 2-50 312_B:360_B IWKNFFFKYPESNFMHKRMLMVSKAVRDNPEARKYILKAQCNDAYWHGV
d1k1xb1 53-73 363_B:383_B GIYLPHLRRTVWENIIKAQRY
# STRALCP results (SPANS in common) for: d1k1ya1
d1k1ya1 2-50 312_A:360_A IWKNFFFKYPESNFMHKRMLMVSKAVRDNPEARKYILKAQCNDAYWHGV
d1k1ya1 53-73 363_A:383_A GIYLPHLRRTVWENIIKAQRY
# STRALCP results (SPANS in common) for: d1k1yb1
d1k1yb1 2-50 312_B:360_B IWKNFFFKYPESNFMHKRMLMVSKAVRDNPEARKYILKAQCNDAYWHGV
d1k1yb1 53-73 363_B:383_B GIYLPHLRRTVWENIIKAQRY
# STRALCP results (SPANS in common) for: d1k1wa1
d1k1wa1 2-50 312_A:360_A IWKNFFFKYPESNFXHKRXLXVSKAVRDNPEARKYILKAQCNDAYWHGV
d1k1wa1 53-73 363_A:383_A GIYLPHLRRTVWENIIKAQRY
END_of_CLUSTER
...
CLUSTER_NB: 2
Nb_of_members(1): 5
Reference_name: d1tf0b_
Length: 53
Nb_of_matches: 29
Nb_of_spans: 4
Nb_of_slots: 6
Cluster Name Class ......############.##.....#######.....########.....
Cluster:2 d1tf0b_ a.8.1.2 ......KNAKEDAIAELK.AG.....YFNAINK.....EVNALKNE.....
Cluster:2 d1gab__ a.8.1.2 ......KNAKEDAIAELK.AG.....YFNAINK.....EVNALKNE.....
Cluster:2 d1prb__ a.8.1.2 ......KNAKEDAIAELK.AG.....YFNAINK.....EVNALKNE.....
Cluster:2 d1gjta_ a.8.1.2 ......AEAKVLANRELD.YG.....YKNLINN.....GVKALIDE.....
Cluster:2 d1gjsa_ a.8.1.2 ......AEAKVLANRELD.YG.....YKNLINN.....GVKALIDE.....
# STRALCP results (SPANS in common) for: d1tf0b_
d1tf0b_ 8-19 8_B:19_B KNAKEDAIAELK
d1tf0b_ 21-22 21_B:22_B AG
d1tf0b_ 28-34 28_B:34_B YFNAINK
d1tf0b_ 40-47 40_B:47_B EVNALKNE
# STRALCP results (SPANS in common) for: d1gab__
d1gab__ 8-19 8:19 KNAKEDAIAELK
d1gab__ 21-22 21:22 AG
d1gab__ 28-34 28:34 YFNAINK
d1gab__ 40-47 40:47 EVNALKNE
# STRALCP results (SPANS in common) for: d1prb__
d1prb__ 8-19 8:19 KNAKEDAIAELK
d1prb__ 21-22 21:22 AG
d1prb__ 28-34 28:34 YFNAINK
d1prb__ 40-47 40:47 EVNALKNE
# STRALCP results (SPANS in common) for: d1gjta_
d1gjta_ 21-32 21_A:32_A AEAKVLANRELD
d1gjta_ 34-35 34_A:35_A YG
d1gjta_ 40-46 40_A:46_A YKNLINN
d1gjta_ 52-59 52_A:59_A GVKALIDE
# STRALCP results (SPANS in common) for: d1gjsa_
d1gjsa_ 21-32 21_A:32_A AEAKVLANRELD
d1gjsa_ 34-35 34_A:35_A YG
d1gjsa_ 40-46 40_A:46_A YKNLINN
d1gjsa_ 52-59 52_A:59_A GVKALIDE
END_of_CLUSTER
.
CLUSTER_NB: 3
Nb_of_members(1): 2
Reference_name: d1gvnc_
Length: 85
Nb_of_matches: 82
Nb_of_spans: 1
Nb_of_slots: 9
Cluster Name Class .##################################################################################
Cluster:3 d1gvnc_ a.8.2.1 .TYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLLEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYSKQVLN
Cluster:3 d1gvna_ a.8.2.1 .TYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLLEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYSKQVLN
# STRALCP results (SPANS in common) for: d1gvnc_
d1gvnc_ 3-84 4_C:85_C TYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLLEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYSKQVLN
# STRALCP results (SPANS in common) for: d1gvna_
d1gvna_ 2-83 4_A:85_A TYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLLEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYSKQVLN
END_of_CLUSTER
Calculated number of clusters: 3
END of job
The output from STRALCP calculations (Summary LGA results: Summary_lga.STRALCP_test_ws18211).
The results from all-against-all pairwise LGA comparisons:
(For details about SUMMARY(LGA) records please look at LGA parameters)
Name1 Name2 N1 N2 DIST N RMSD Seq_ID LGA_S LGA_Q
d1gab__.d1gab__:SUMMARY(LGA) 53 53 5.0 53 0.00 100.00 100.000 53.000
d1prb__.d1gab__:SUMMARY(LGA) 53 53 5.0 53 1.60 100.00 95.680 3.109
d1tf0b_.d1gab__:SUMMARY(LGA) 53 53 5.0 47 2.19 87.23 78.910 2.048
d1gjsa_.d1gab__:SUMMARY(LGA) 65 53 5.0 46 2.30 54.35 75.342 1.916
d1gjta_.d1gab__:SUMMARY(LGA) 65 53 5.0 46 2.55 47.83 70.108 1.734
d1gvna_.d1gab__:SUMMARY(LGA) 87 53 5.0 41 2.82 4.88 51.637 1.402
d1gvnc_.d1gab__:SUMMARY(LGA) 85 53 5.0 41 2.84 4.88 51.373 1.392
d1k1wa1.d1gab__:SUMMARY(LGA) 74 53 5.0 38 2.86 5.26 48.942 1.284
d1k1yb1.d1gab__:SUMMARY(LGA) 74 53 5.0 37 3.09 5.41 47.849 1.160
d1k1xa1.d1gab__:SUMMARY(LGA) 74 53 5.0 35 2.85 5.71 47.651 1.188
d1k1ya1.d1gab__:SUMMARY(LGA) 74 53 5.0 35 2.90 5.71 46.551 1.166
d1k1xb1.d1gab__:SUMMARY(LGA) 74 53 5.0 34 2.88 2.94 46.424 1.140
d1gjsa_.d1gjsa_:SUMMARY(LGA) 65 65 5.0 65 0.00 100.00 100.000 65.000
d1gjta_.d1gjsa_:SUMMARY(LGA) 65 65 5.0 52 0.96 94.23 78.745 4.886
d1tf0b_.d1gjsa_:SUMMARY(LGA) 53 65 5.0 52 1.44 48.08 75.520 3.387
d1prb__.d1gjsa_:SUMMARY(LGA) 53 65 5.0 50 2.46 48.00 64.783 1.950
d1gvnc_.d1gjsa_:SUMMARY(LGA) 85 65 5.0 52 2.53 9.62 62.411 1.975
d1gvna_.d1gjsa_:SUMMARY(LGA) 87 65 5.0 52 2.58 11.54 56.679 1.942
d1k1ya1.d1gjsa_:SUMMARY(LGA) 74 65 5.0 45 2.55 11.11 51.809 1.697
d1k1xa1.d1gjsa_:SUMMARY(LGA) 74 65 5.0 45 2.55 11.11 51.796 1.699
d1k1wa1.d1gjsa_:SUMMARY(LGA) 74 65 5.0 45 2.61 11.11 50.891 1.658
d1k1xb1.d1gjsa_:SUMMARY(LGA) 74 65 5.0 43 2.71 6.98 47.704 1.530
d1k1yb1.d1gjsa_:SUMMARY(LGA) 74 65 5.0 43 2.76 6.98 46.697 1.505
d1gab__.d1gjsa_:SUMMARY(LGA) 53 65 5.0 46 2.68 34.78 45.660 1.656
d1gjta_.d1gjta_:SUMMARY(LGA) 65 65 5.0 65 0.00 100.00 100.000 65.000
d1gjsa_.d1gjta_:SUMMARY(LGA) 65 65 5.0 53 1.25 96.23 80.196 3.912
d1tf0b_.d1gjta_:SUMMARY(LGA) 53 65 5.0 52 1.33 51.92 75.951 3.648
d1prb__.d1gjta_:SUMMARY(LGA) 53 65 5.0 48 2.10 50.00 62.844 2.182
d1gvna_.d1gjta_:SUMMARY(LGA) 87 65 5.0 50 2.50 8.00 56.735 1.923
d1gvnc_.d1gjta_:SUMMARY(LGA) 85 65 5.0 47 2.15 8.51 54.580 2.089
d1k1xa1.d1gjta_:SUMMARY(LGA) 74 65 5.0 45 2.58 11.11 52.960 1.682
d1k1ya1.d1gjta_:SUMMARY(LGA) 74 65 5.0 46 2.82 13.04 52.897 1.573
d1k1wa1.d1gjta_:SUMMARY(LGA) 74 65 5.0 44 2.62 11.36 48.527 1.620
d1k1xb1.d1gjta_:SUMMARY(LGA) 74 65 5.0 44 2.77 9.09 47.802 1.531
d1k1yb1.d1gjta_:SUMMARY(LGA) 74 65 5.0 43 2.70 6.98 47.626 1.538
d1gab__.d1gjta_:SUMMARY(LGA) 53 65 5.0 45 2.73 37.78 45.644 1.591
d1gvna_.d1gvna_:SUMMARY(LGA) 87 87 5.0 87 0.00 100.00 100.000 87.000
d1gvnc_.d1gvna_:SUMMARY(LGA) 85 87 5.0 84 0.76 100.00 95.826 9.718
d1k1wa1.d1gvna_:SUMMARY(LGA) 74 87 5.0 59 2.66 10.17 51.756 2.140
d1k1xa1.d1gvna_:SUMMARY(LGA) 74 87 5.0 59 2.66 8.47 50.966 2.136
d1gjsa_.d1gvna_:SUMMARY(LGA) 65 87 5.0 53 2.66 9.43 46.287 1.921
d1k1xb1.d1gvna_:SUMMARY(LGA) 74 87 5.0 62 3.03 4.84 45.802 1.983
d1k1yb1.d1gvna_:SUMMARY(LGA) 74 87 5.0 62 3.02 4.84 45.640 1.987
d1gjta_.d1gvna_:SUMMARY(LGA) 65 87 5.0 52 2.69 9.62 45.441 1.863
d1k1ya1.d1gvna_:SUMMARY(LGA) 74 87 5.0 61 3.05 6.56 42.705 1.936
d1tf0b_.d1gvna_:SUMMARY(LGA) 53 87 5.0 51 2.60 1.96 40.723 1.887
d1prb__.d1gvna_:SUMMARY(LGA) 53 87 5.0 45 2.71 6.67 33.936 1.600
d1gab__.d1gvna_:SUMMARY(LGA) 53 87 5.0 41 2.89 4.88 30.530 1.371
d1gvnc_.d1gvnc_:SUMMARY(LGA) 85 85 5.0 85 0.00 100.00 100.000 85.000
d1gvna_.d1gvnc_:SUMMARY(LGA) 87 85 5.0 84 0.76 100.00 98.080 9.718
d1k1ya1.d1gvnc_:SUMMARY(LGA) 74 85 5.0 59 2.65 10.17 52.596 2.148
d1k1wa1.d1gvnc_:SUMMARY(LGA) 74 85 5.0 59 2.73 10.17 52.076 2.088
d1k1xa1.d1gvnc_:SUMMARY(LGA) 74 85 5.0 58 2.67 12.07 49.716 2.097
d1k1yb1.d1gvnc_:SUMMARY(LGA) 74 85 5.0 57 2.56 12.28 49.705 2.140
d1gjta_.d1gvnc_:SUMMARY(LGA) 65 85 5.0 52 2.63 9.62 46.405 1.904
d1k1xb1.d1gvnc_:SUMMARY(LGA) 74 85 5.0 59 3.15 6.78 42.079 1.818
d1gjsa_.d1gvnc_:SUMMARY(LGA) 65 85 5.0 50 2.47 8.00 41.395 1.943
d1tf0b_.d1gvnc_:SUMMARY(LGA) 53 85 5.0 51 2.60 3.92 40.714 1.892
d1prb__.d1gvnc_:SUMMARY(LGA) 53 85 5.0 45 2.73 6.67 34.709 1.593
d1gab__.d1gvnc_:SUMMARY(LGA) 53 85 5.0 40 3.02 7.50 30.064 1.284
d1k1wa1.d1k1wa1:SUMMARY(LGA) 74 74 5.0 74 0.00 100.00 100.000 74.000
d1k1xa1.d1k1wa1:SUMMARY(LGA) 74 74 5.0 74 0.37 95.95 99.793 15.862
d1k1yb1.d1k1wa1:SUMMARY(LGA) 74 74 5.0 74 0.58 95.95 99.478 10.843
d1k1ya1.d1k1wa1:SUMMARY(LGA) 74 74 5.0 74 0.52 95.95 99.478 12.008
d1k1xb1.d1k1wa1:SUMMARY(LGA) 74 74 5.0 74 0.60 95.95 99.384 10.624
d1gvnc_.d1k1wa1:SUMMARY(LGA) 85 74 5.0 59 2.76 8.47 58.690 2.064
d1gvna_.d1k1wa1:SUMMARY(LGA) 87 74 5.0 56 2.91 8.93 52.846 1.861
d1gjta_.d1k1wa1:SUMMARY(LGA) 65 74 5.0 45 2.60 11.11 45.301 1.666
d1gjsa_.d1k1wa1:SUMMARY(LGA) 65 74 5.0 45 2.59 11.11 44.859 1.673
d1tf0b_.d1k1wa1:SUMMARY(LGA) 53 74 5.0 41 2.83 4.88 38.534 1.400
d1prb__.d1k1wa1:SUMMARY(LGA) 53 74 5.0 36 2.58 5.56 34.830 1.345
d1gab__.d1k1wa1:SUMMARY(LGA) 53 74 5.0 38 3.07 5.26 34.297 1.197
d1k1xa1.d1k1xa1:SUMMARY(LGA) 74 74 5.0 74 0.00 100.00 100.000 74.000
d1k1wa1.d1k1xa1:SUMMARY(LGA) 74 74 5.0 74 0.37 95.95 99.793 15.862
d1k1ya1.d1k1xa1:SUMMARY(LGA) 74 74 5.0 74 0.42 100.00 99.686 14.333
d1k1yb1.d1k1xa1:SUMMARY(LGA) 74 74 5.0 74 0.55 100.00 99.591 11.334
d1k1xb1.d1k1xa1:SUMMARY(LGA) 74 74 5.0 74 0.57 100.00 99.591 10.991
d1gvna_.d1k1xa1:SUMMARY(LGA) 87 74 5.0 59 2.64 8.47 59.936 2.153
d1gvnc_.d1k1xa1:SUMMARY(LGA) 85 74 5.0 59 2.98 6.78 55.123 1.917
d1gjta_.d1k1xa1:SUMMARY(LGA) 65 74 5.0 45 2.54 11.11 46.370 1.703
d1tf0b_.d1k1xa1:SUMMARY(LGA) 53 74 5.0 44 2.64 11.36 42.168 1.603
d1gjsa_.d1k1xa1:SUMMARY(LGA) 65 74 5.0 42 2.63 4.76 41.841 1.539
d1prb__.d1k1xa1:SUMMARY(LGA) 53 74 5.0 40 2.82 5.00 35.947 1.369
d1gab__.d1k1xa1:SUMMARY(LGA) 53 74 5.0 36 2.80 5.56 32.951 1.243
d1k1yb1.d1k1xb1:SUMMARY(LGA) 74 74 5.0 74 0.12 100.00 100.000 34.356
d1k1ya1.d1k1xb1:SUMMARY(LGA) 74 74 5.0 74 0.30 100.00 100.000 18.286
d1k1xb1.d1k1xb1:SUMMARY(LGA) 74 74 5.0 74 0.00 100.00 100.000 74.000
d1k1xa1.d1k1xb1:SUMMARY(LGA) 74 74 5.0 74 0.57 100.00 99.591 10.991
d1k1wa1.d1k1xb1:SUMMARY(LGA) 74 74 5.0 74 0.60 95.95 99.384 10.624
d1gvnc_.d1k1xb1:SUMMARY(LGA) 85 74 5.0 56 2.91 10.71 52.525 1.862
d1gvna_.d1k1xb1:SUMMARY(LGA) 87 74 5.0 52 2.66 7.69 47.151 1.884
d1gjsa_.d1k1xb1:SUMMARY(LGA) 65 74 5.0 44 2.77 6.82 42.862 1.534
d1tf0b_.d1k1xb1:SUMMARY(LGA) 53 74 5.0 42 2.59 7.14 39.677 1.559
d1prb__.d1k1xb1:SUMMARY(LGA) 53 74 5.0 41 2.80 4.88 37.985 1.414
d1gjta_.d1k1xb1:SUMMARY(LGA) 65 74 5.0 42 3.06 2.38 37.461 1.327
d1gab__.d1k1xb1:SUMMARY(LGA) 53 74 5.0 36 2.66 5.56 35.930 1.305
d1k1yb1.d1k1ya1:SUMMARY(LGA) 74 74 5.0 74 0.31 100.00 100.000 18.196
d1k1ya1.d1k1ya1:SUMMARY(LGA) 74 74 5.0 74 0.00 100.00 100.000 73.999
d1k1xb1.d1k1ya1:SUMMARY(LGA) 74 74 5.0 74 0.30 100.00 100.000 18.286
d1k1xa1.d1k1ya1:SUMMARY(LGA) 74 74 5.0 74 0.42 100.00 99.686 14.333
d1k1wa1.d1k1ya1:SUMMARY(LGA) 74 74 5.0 74 0.52 95.95 99.478 12.008
d1gvnc_.d1k1ya1:SUMMARY(LGA) 85 74 5.0 59 2.68 10.17 59.619 2.121
d1gvna_.d1k1ya1:SUMMARY(LGA) 87 74 5.0 52 2.76 7.69 45.635 1.818
d1gjta_.d1k1ya1:SUMMARY(LGA) 65 74 5.0 43 2.52 9.30 43.053 1.643
d1gjsa_.d1k1ya1:SUMMARY(LGA) 65 74 5.0 44 2.80 6.82 42.127 1.516
d1tf0b_.d1k1ya1:SUMMARY(LGA) 53 74 5.0 43 2.76 4.65 40.744 1.505
d1prb__.d1k1ya1:SUMMARY(LGA) 53 74 5.0 42 2.79 4.76 39.700 1.452
d1gab__.d1k1ya1:SUMMARY(LGA) 53 74 5.0 36 2.75 5.56 33.642 1.262
d1k1yb1.d1k1yb1:SUMMARY(LGA) 74 74 5.0 74 0.00 100.00 100.000 74.000
d1k1ya1.d1k1yb1:SUMMARY(LGA) 74 74 5.0 74 0.31 100.00 100.000 18.196
d1k1xb1.d1k1yb1:SUMMARY(LGA) 74 74 5.0 74 0.12 100.00 100.000 34.356
d1k1xa1.d1k1yb1:SUMMARY(LGA) 74 74 5.0 74 0.55 100.00 99.591 11.334
d1k1wa1.d1k1yb1:SUMMARY(LGA) 74 74 5.0 74 0.58 95.95 99.478 10.843
d1gvnc_.d1k1yb1:SUMMARY(LGA) 85 74 5.0 58 2.63 10.34 58.898 2.121
d1gvna_.d1k1yb1:SUMMARY(LGA) 87 74 5.0 53 2.76 7.55 47.147 1.851
d1gjsa_.d1k1yb1:SUMMARY(LGA) 65 74 5.0 44 2.78 6.82 42.510 1.526
d1tf0b_.d1k1yb1:SUMMARY(LGA) 53 74 5.0 42 2.56 4.76 42.084 1.576
d1gjta_.d1k1yb1:SUMMARY(LGA) 65 74 5.0 42 2.86 2.38 38.195 1.418
d1prb__.d1k1yb1:SUMMARY(LGA) 53 74 5.0 40 2.79 5.00 36.467 1.385
d1gab__.d1k1yb1:SUMMARY(LGA) 53 74 5.0 38 2.84 2.63 34.939 1.293
d1prb__.d1prb__:SUMMARY(LGA) 53 53 5.0 53 0.00 100.00 100.000 53.000
d1gab__.d1prb__:SUMMARY(LGA) 53 53 5.0 53 1.60 100.00 95.680 3.109
d1tf0b_.d1prb__:SUMMARY(LGA) 53 53 5.0 51 2.04 96.08 86.096 2.387
d1gjsa_.d1prb__:SUMMARY(LGA) 65 53 5.0 49 2.17 51.02 78.832 2.161
d1gjta_.d1prb__:SUMMARY(LGA) 65 53 5.0 47 2.09 48.94 76.875 2.145
d1gvnc_.d1prb__:SUMMARY(LGA) 85 53 5.0 45 2.41 4.44 60.981 1.790
d1gvna_.d1prb__:SUMMARY(LGA) 87 53 5.0 45 2.40 4.44 60.742 1.799
d1k1yb1.d1prb__:SUMMARY(LGA) 74 53 5.0 38 2.50 2.63 53.809 1.463
d1k1xa1.d1prb__:SUMMARY(LGA) 74 53 5.0 40 2.81 2.50 51.633 1.377
d1k1ya1.d1prb__:SUMMARY(LGA) 74 53 5.0 39 2.70 2.56 50.314 1.395
d1k1xb1.d1prb__:SUMMARY(LGA) 74 53 5.0 38 2.61 2.63 50.119 1.403
d1k1wa1.d1prb__:SUMMARY(LGA) 74 53 5.0 39 2.84 2.56 48.839 1.324
d1tf0b_.d1tf0b_:SUMMARY(LGA) 53 53 5.0 53 0.00 100.00 100.000 53.000
d1gjta_.d1tf0b_:SUMMARY(LGA) 65 53 5.0 52 1.38 48.08 92.883 3.503
d1gjsa_.d1tf0b_:SUMMARY(LGA) 65 53 5.0 52 1.44 48.08 92.618 3.387
d1prb__.d1tf0b_:SUMMARY(LGA) 53 53 5.0 50 2.12 96.00 85.551 2.257
d1gab__.d1tf0b_:SUMMARY(LGA) 53 53 5.0 47 2.14 89.36 77.894 2.099
d1gvnc_.d1tf0b_:SUMMARY(LGA) 85 53 5.0 50 2.63 4.00 64.608 1.829
d1gvna_.d1tf0b_:SUMMARY(LGA) 87 53 5.0 49 2.56 4.08 64.231 1.843
d1k1xa1.d1tf0b_:SUMMARY(LGA) 74 53 5.0 44 2.77 11.36 58.028 1.532
d1k1wa1.d1tf0b_:SUMMARY(LGA) 74 53 5.0 42 2.64 4.76 57.463 1.531
d1k1yb1.d1tf0b_:SUMMARY(LGA) 74 53 5.0 42 2.78 4.76 55.553 1.456
d1k1xb1.d1tf0b_:SUMMARY(LGA) 74 53 5.0 42 2.70 4.76 55.437 1.500
d1k1ya1.d1tf0b_:SUMMARY(LGA) 74 53 5.0 42 2.72 4.76 55.181 1.492
All done! (Lists: STRALCP_test_ws18211_L1 STRALCP_test_ws18211_L2)