########## 
# PROTEIN: Q2246_545_125.5wLII_11077_35                                      276   125 # Category_C1
# Length:  276 
# Weight:  31797.98 
# Similarity: UniProt_A3ESG3, BLAST_A3ESG3, PDB_templates_INFO   
# Best Pcover   Model   PDB        N_AA    SISC   E-val    Seq_ID      LAL      Overlap
# Cat   51.81   M_00    1bcc_C      380      6    3e-65    15.000    143:144    (26-168:211-354)       
# Evl   51.81   M_00    1bcc_C      380      6    3e-65    15.000    143:144    (26-168:211-354)       
# Sid   30.43   M_00    1q90_D      159      1    0.064    27.000     84:91     (35-125:33-116)        
# Cov   57.97   M_01    1qcr_C      378      1    2e-39    19.000    160:176    (25-184:203-378)       
# LaL   52.90   M_03    1ezv_C      385      6    4e-37    17.000    146:147    (26-171:211-357)       
# OvN   54.71   M_03    1ezv_C      385      6    9e-24    15.000    151:164    (21-171:201-364)       
# OvC   54.71   M_06    2qjy_A      445     12    5e-20    17.000    151:185    (37-187:240-424)       

Cat model LGA comparison: PDB - Cat
PDB: 1bcc   PDBsum HEADER OXIDOREDUCTASE 23-MAR-98 1BCC TITLE CYTOCHROME BC1 COMPLEX FROM CHICKEN SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; COMPND 5 EC: 1.10.2.2; COMPND 11 EC: 1.10.2.2; COMPND 17 EC: 1.10.2.2; COMPND 23 EC: 1.10.2.2; COMPND 29 EC: 1.10.2.2; COMPND 35 EC: 1.10.2.2; COMPND 41 EC: 1.10.2.2; COMPND 47 EC: 1.10.2.2; COMPND 53 EC: 1.10.2.2; COMPND 59 EC: 1.10.2.2; KEYWDS UBIQUINONE, OXIDOREDUCTASE, REDOX ENZYME, MEMBRANE PROTEIN, KEYWDS 2 RESPIRATORY CHAIN, ELECTRON TRANSPORT SCOP: a.3 Cytochrome c SCOP: a.3.1 Cytochrome c SCOP: a.3.1.3 Cytochrome bc1 domain SCOP: b.33 ISP domain SCOP: b.33.1 ISP domain SCOP: b.33.1.1 Rieske iron-sulfur protein (ISP) SCOP: d.185 LuxS/MPP-like metallohydrolase SCOP: d.185.1 LuxS/MPP-like metallohydrolase SCOP: d.185.1.1 MPP-like SCOP: f.23 Single transmembrane helix SCOP: f.23.11 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor SCOP: f.23.11.1 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor SCOP: f.23 Single transmembrane helix SCOP: f.23.12 ISP transmembrane anchor SCOP: f.23.12.1 ISP transmembrane anchor SCOP: f.23 Single transmembrane helix SCOP: f.23.13 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.23.13.1 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.23 Single transmembrane helix SCOP: f.23.14 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.23.14.1 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.32 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.32.1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.32.1.1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.21 Heme-binding four-helical bundle SCOP: f.21.1 Transmembrane di-heme cytochromes SCOP: f.21.1.2 Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.27 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.27.1 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.27.1.1 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.28 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.28.1 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.28.1.1 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) PDB: 1q90   PDBsum HEADER PHOTOSYNTHESIS 22-AUG-03 1Q90 TITLE STRUCTURE OF THE CYTOCHROME B6F (PLASTOHYDROQUINONE : TITLE 2 PLASTOCYANIN OXIDOREDUCTASE) FROM CHLAMYDOMONAS REINHARDTII SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 3 ORGANISM_TAXID: 3055; SOURCE 13 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; COMPND 17 EC: 1.10.99.1; COMPND 30 EC: 1.10.99.1; KEYWDS MEMBRANE PROTEIN COMPLEX, PHOTOSYNTHESIS, ELECTRON TRANSFER, KEYWDS 2 OXYDOREDUCTASE, CHLOROPHYLL, BETA-CAROTENE, STIGMATELLIN, KEYWDS 3 SULFOQUINOVOSYLDIACYLGLYCEROL, MONOGALACTOSYLDIACYLGLYCEROL SCOP: b.2 Common fold of diphtheria toxin/transcription factors/cytochrome f SCOP: b.2.6 Cytochrome f, large domain SCOP: b.2.6.1 Cytochrome f, large domain SCOP: b.33 ISP domain SCOP: b.33.1 ISP domain SCOP: b.33.1.1 Rieske iron-sulfur protein (ISP) SCOP: b.84 Barrel-sandwich hybrid SCOP: b.84.2 Rudiment single hybrid motif SCOP: b.84.2.2 Cytochrome f, small domain SCOP: f.23 Single transmembrane helix SCOP: f.23.12 ISP transmembrane anchor SCOP: f.23.12.1 ISP transmembrane anchor SCOP: f.23 Single transmembrane helix SCOP: f.23.23 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor SCOP: f.23.23.1 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor SCOP: f.23 Single transmembrane helix SCOP: f.23.24 PetL subunit of the cytochrome b6f complex SCOP: f.23.24.1 PetL subunit of the cytochrome b6f complex SCOP: f.23 Single transmembrane helix SCOP: f.23.25 PetM subunit of the cytochrome b6f complex SCOP: f.23.25.1 PetM subunit of the cytochrome b6f complex SCOP: f.23 Single transmembrane helix SCOP: f.23.26 PetG subunit of the cytochrome b6f complex SCOP: f.23.26.1 PetG subunit of the cytochrome b6f complex SCOP: f.23 Single transmembrane helix SCOP: f.23.27 PetN subunit of the cytochrome b6f complex SCOP: f.23.27.1 PetN subunit of the cytochrome b6f complex SCOP: f.32 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.32.1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.32.1.1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.21 Heme-binding four-helical bundle SCOP: f.21.1 Transmembrane di-heme cytochromes SCOP: f.21.1.2 Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) PDB: 1qcr   PDBsum HEADER OXIDOREDUCTASE 17-MAY-97 1QCR TITLE CRYSTAL STRUCTURE OF BOVINE MITOCHONDRIAL CYTOCHROME BC1 TITLE 2 COMPLEX, ALPHA CARBON ATOMS ONLY SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; COMPND 5 EC: 1.10.2.2; COMPND 10 EC: 1.10.2.2; COMPND 15 EC: 1.10.2.2; COMPND 20 EC: 1.10.2.2; COMPND 25 EC: 1.10.2.2; COMPND 30 EC: 1.10.2.2; COMPND 35 EC: 1.10.2.2; COMPND 40 EC: 1.10.2.2; COMPND 45 EC: 1.10.2.2; COMPND 50 EC: 1.10.2.2; COMPND 55 EC: 1.10.2.2 KEYWDS BC1, QCR, MEMBRANE PROTEIN, PROTON TRANSLOCATION, ELECTRON KEYWDS 2 TRANSFER, PROTEASE, MPP, MITOCHONDRIAL PROCESSING PEPTIDASE, KEYWDS 3 STRUCTURE, CYTOCHROME C1, CYTOCHROME B, RIESKE, IRON SULFER KEYWDS 4 PROTEIN, OXIDOREDUCTASE SCOP: a.3 Cytochrome c SCOP: a.3.1 Cytochrome c SCOP: a.3.1.3 Cytochrome bc1 domain SCOP: b.33 ISP domain SCOP: b.33.1 ISP domain SCOP: b.33.1.1 Rieske iron-sulfur protein (ISP) SCOP: d.185 LuxS/MPP-like metallohydrolase SCOP: d.185.1 LuxS/MPP-like metallohydrolase SCOP: d.185.1.1 MPP-like SCOP: f.23 Single transmembrane helix SCOP: f.23.11 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor SCOP: f.23.11.1 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor SCOP: f.23 Single transmembrane helix SCOP: f.23.12 ISP transmembrane anchor SCOP: f.23.12.1 ISP transmembrane anchor SCOP: f.23 Single transmembrane helix SCOP: f.23.13 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.23.13.1 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.23 Single transmembrane helix SCOP: f.23.14 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.23.14.1 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.23 Single transmembrane helix SCOP: f.23.15 Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.23.15.1 Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.32 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.32.1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.32.1.1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.21 Heme-binding four-helical bundle SCOP: f.21.1 Transmembrane di-heme cytochromes SCOP: f.21.1.2 Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.27 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.27.1 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.27.1.1 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.28 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.28.1 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.28.1.1 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) PDB: 1ezv   PDBsum HEADER OXIDOREDUCTASE/ELECTRON TRANSPORT 12-MAY-00 1EZV TITLE STRUCTURE OF THE YEAST CYTOCHROME BC1 COMPLEX CO- TITLE 2 CRYSTALLIZED WITH AN ANTIBODY FV-FRAGMENT SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; COMPND 6 EC: 1.10.2.2; COMPND 13 EC: 1.10.2.2; COMPND 29 EC: 1.10.2.2; COMPND 36 EC: 1.10.2.2; COMPND 43 EC: 1.10.2.2; COMPND 50 EC: 1.10.2.2; COMPND 57 EC: 1.10.2.2; KEYWDS CYTOCHROME BC1 COMPLEX, COMPLEX III, QCR, MITOCHONDRIA, KEYWDS 2 YEAST, ANTIBODY FV-FRAGMENT, STIGMATELLIN, COENZYME Q6, KEYWDS 3 MATRIX PROCESSING PEPTIDASES, UBIQUINONE, ELECTRON TRANSFER, KEYWDS 4 PROTON TRANSFER, Q-CYCLE, OXIDOREDUCTASE/ELECTRON TRANSPORT KEYWDS 5 COMPLEX SCOP: a.3 Cytochrome c SCOP: a.3.1 Cytochrome c SCOP: a.3.1.3 Cytochrome bc1 domain SCOP: b.1 Immunoglobulin-like beta-sandwich SCOP: b.1.1 Immunoglobulin SCOP: b.1.1.1 V set domains (antibody variable domain-like) SCOP: b.33 ISP domain SCOP: b.33.1 ISP domain SCOP: b.33.1.1 Rieske iron-sulfur protein (ISP) SCOP: d.185 LuxS/MPP-like metallohydrolase SCOP: d.185.1 LuxS/MPP-like metallohydrolase SCOP: d.185.1.1 MPP-like SCOP: f.23 Single transmembrane helix SCOP: f.23.11 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor SCOP: f.23.11.1 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor SCOP: f.23 Single transmembrane helix SCOP: f.23.12 ISP transmembrane anchor SCOP: f.23.12.1 ISP transmembrane anchor SCOP: f.23 Single transmembrane helix SCOP: f.23.13 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.23.13.1 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.23 Single transmembrane helix SCOP: f.23.14 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.23.14.1 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.32 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.32.1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.32.1.1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.21 Heme-binding four-helical bundle SCOP: f.21.1 Transmembrane di-heme cytochromes SCOP: f.21.1.2 Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.27 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.27.1 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.27.1.1 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.28 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.28.1 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) SCOP: f.28.1.1 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) PDB: 2qjy   PDBsum HEADER OXIDOREDUCTASE 09-JUL-07 2QJY TITLE CRYSTAL STRUCTURE OF RHODOBACTER SPHAEROIDES DOUBLE MUTANT TITLE 2 WITH STIGMATELLIN AND UQ2 SOURCE 2 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES; SOURCE 3 ORGANISM_TAXID: 1063; SOURCE 10 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES; COMPND 15 EC: 1.10.2.2; KEYWDS CYTOCHROME B, 8 TM HELIXCES CYTOCHROME C1, 1 C-TERM TM KEYWDS 2 HELIX RIESKE, 1 N-TERM TM HELIX, OXIDOREDUCTASE SCOP: none