AS2TS service is designed to generate tertiary structure (3D model) for a given sequence of amino-acids.
Be aware that not for all proteins a correct and complete 3D model can be produced using the current
version of the system.
You have two different ways to enter your FASTA formatted sequences:
Upload file (instead of plain protein sequence)
Paste your protein sequences (FASTA formatted):
Search and modeling level (0 <= S <= 15 - number of AS2TS iterations): 0 - draft (Quicker), 2 - enhanced (Slower)
F-split: F - maximum length of the sequence fragment for modeling: (30 <= F <= 1100)
Initial sequence library for PSI-BLAST (PDB, nr, Uniref_100, Uniref_90, Uniref_50, ...)
Structural template library (PDB, Yeast_3DModels_Rosetta, ...)
Upload additional library for SV processing (optional)