SEQALSV service is designed to facilitate calculation of sequence alignments between a given sequence (query) and a library of provided sequences. Calculations are performed using Smith-Waterman and BLAST algorithms.
First enter your email address in the box below. (Optional) E-mail Be sure that your email address is correct. Your data will be processed and the result of SeqalSV analysis sent automatically to the above address. Bear in mind that if you enter an incorrect email address there is no way the server can contact you!
Paste or type your protein sequence (query) (FASTA format) into the box below:
Sequence identity cutoff: E-value cutoff: Force high identity correspondences: Yes No
Number of BLAST iterations to select library: ( 2 <= n <= 10 )
You have three different ways to enter your FASTA formatted library of sequences:
1. Upload file containing the library of protein sequences (name of your local file)
or
2. Paste the library of protein sequences (FASTA formatted):
3. Select from the following set of standard libraries: PDB nr Uniref_100 Uniref_90 Uniref_50
Start processing: