########## 
# PROTEIN: Q2246_545_537.5wLII_11390_73                                      493   537 # Category_C2
# Length:  493 
# Weight:  53930.57 
# Similarity: UniProt_B6ARN8, BLAST_B6ARN8, PDB_templates_INFO   
# Best Pcover   Model   PDB        N_AA    SISC   E-val    Seq_ID      LAL      Overlap
# Cat   66.53   M_00    1w3b_A      388      2    2e-62     8.000    328:359    (4-362:59-386)         
# Evl   66.53   M_00    1w3b_A      388      2    2e-62     8.000    328:359    (4-362:59-386)         
# Sid   18.46   M_21    2c2l_A      281      4    1e-16    19.000     91:94     (56-149:11-101)        
# Cov   80.12   M_34    1xi4_A     1630     18    5e-11     6.000    395:477    (1-430:1065-1506)      
# LaL   25.15   M_06    2vyi_A      131      2    2e-27     8.000    124:124    (43-166:6-129)         
# OvN   33.27   M_16    3cvq_A      327      1    9e-20     9.000    164:193    (1-181:78-267)         
# OvC   80.12   M_34    1xi4_A     1630     18    5e-11     6.000    395:477    (1-430:1065-1506)      



Cat model


LGA comparison: PDB - Cat



PDB: 1w3b   PDBsum
  HEADER    TRANSFERASE                             14-JUL-04   1W3B              
  TITLE     THE SUPERHELICAL TPR DOMAIN OF O-LINKED GLCNAC TRANSFERASE            
  TITLE    2 REVEALS STRUCTURAL SIMILARITIES TO IMPORTIN ALPHA.                   
  SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
  SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
  SOURCE   4 ORGANISM_TAXID: 9606;                                                
  COMPND   7 EC: 2.4.1.-;                                                         
  KEYWDS    OGT, GLCNAC, NUCLEOPORIN, O-LINKED GLYCOSYLATION, TPR                 
  KEYWDS   2 REPEAT, PROTEIN BINDING, SIGNAL TRANSDUCTION, TRANSFERASE            
  SCOP: a.118          alpha-alpha superhelix
  SCOP: a.118.8        TPR-like
  SCOP: a.118.8.1      Tetratricopeptide repeat (TPR)

PDB: 2c2l   PDBsum
  HEADER    CHAPERONE                               29-SEP-05   2C2L              
  TITLE     CRYSTAL STRUCTURE OF THE CHIP U-BOX E3 UBIQUITIN LIGASE               
  SOURCE   2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;                                   
  SOURCE   3 ORGANISM_COMMON: MOUSE;                                              
  SOURCE   4 ORGANISM_TAXID: 10090;                                               
  KEYWDS    CHAPERONE, E3 LIGASE, UBIQUITINYLATION, TPR, HEAT-SHOCK               
  KEYWDS   2 PROTEIN COMPLEX                                                      
  SCOP: a.118          alpha-alpha superhelix
  SCOP: a.118.8        TPR-like
  SCOP: a.118.8.1      Tetratricopeptide repeat (TPR)
  SCOP: g.44           RING/U-box
  SCOP: g.44.1         RING/U-box
  SCOP: g.44.1.2       U-box

PDB: 1xi4   PDBsum
  HEADER    ENDOCYTOSIS/EXOCYTOSIS                  21-SEP-04   1XI4              
  TITLE     CLATHRIN D6 COAT                                                      
  SOURCE   2 ORGANISM_SCIENTIFIC: BOS TAURUS;                                     
  SOURCE   3 ORGANISM_COMMON: CATTLE;                                             
  SOURCE   4 ORGANISM_TAXID: 9913;                                                
  KEYWDS    CLATHRIN, ALPHA-ZIG-ZAG, BETA-PROPELLER,                              
  KEYWDS   2 ENDOCYTOSIS/EXOCYTOSIS COMPLEX                                       
  SCOP: i.23           clathrin assemblies
  SCOP: i.23.1         clathrin assemblies
  SCOP: i.23.1.1       clathrin assemblies

PDB: 2vyi   PDBsum
  HEADER    CHAPERONE                               24-JUL-08   2VYI              
  TITLE     CRYSTAL STRUCTURE OF THE TPR DOMAIN OF HUMAN SGT                      
  SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
  SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
  SOURCE   4 ORGANISM_TAXID: 9606;                                                
  KEYWDS    SGT, CHAPERONE, TPR REPEAT, PHOSPHOPROTEIN,                           
  KEYWDS   2 TETRATRICOPEPTIDE REPEAT PROTEIN, HOST-VIRUS INTERACTION             
  SCOP: none

PDB: 3cvq   PDBsum
  HEADER    TRANSPORT PROTEIN                       18-APR-08   3CVQ              
  TITLE     STRUCTURE OF PEROXISOMAL TARGETING SIGNAL 1 (PTS1) BINDING            
  TITLE    2 DOMAIN OF TRYPANOSOMA BRUCEI PEROXIN 5 (TBPEX5)COMPLEXED             
  TITLE    3 TO PTS1 PEPTIDE (7-SKL)                                              
  SOURCE   2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI;                             
  KEYWDS    TPR MOTIFS, TPR PROTEIN, PEROXIN 5, PEX5, PTS1 BINDING                
  KEYWDS   2 DOMAIN, PROTEIN-PEPTIDE COMPLEX, RECEPTOR, TPR REPEAT,               
  KEYWDS   3 TRANSPORT PROTEIN                                                    
  SCOP: none