Tom Slezak's group WNV, signature regions
Welcome to AS2TS system!


We are sorry, but some of the services listed below are under reconstruction.

Services marked as are ready to use.


Protein Sequence Analysis services:
SEQALSV - Sequence Alignment-based Sequence Variability * Service description
SOV - segment overlap measure * Service description
Local Sequence Library for AS2TS system * Service description
 
Protein Structure Analysis services:
LGA - pairwise protein structure comparison * Service description
LGA - list of PDB models structure comparison * Service description
STRALCP - Structure Alignment-based Clustering of Proteins * Service description
STRALSV - Structure Alignment-based Sequence Variability * Service description
RBOW - Elbow Angle Calculation * Service description
Local Structure Library for AS2TS system * Service description
 
Protein Structure Modeling services:
AL2TS - sequence-structure alignment (AL) into tertiary structure (TS) * Service description
AS2TS - amino-acid sequence (AS) into tertiary structure (TS) * Service description
AS2TS - Model Builder * Service description
LGA - modeler (DIG-SC: deletions, insertions, gaps, side-chains) * Service description
SCWRL - side-chain builder for AS2TS system * Service description


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Citing AS2TS services:
Zemla A., Zhou Ecale C., Slezak T., Kuczmarski T., Rama D., Torres C., Sawicka D., Barsky D.: "AS2TS system for protein structure modeling and analysis", Nucleic Acids Research, 2005, 33 (Web Server Issue), pp. W111-W115. [MEDLINE]

Please send any comments or suggestions concerning
these facilities to
Adam Zemla : adamz@llnl.gov


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